RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C YGR266WP53326 701 aa0.86□□□□□ -2.27
NIP100YPL174C MIM1Q08176 113 aa0.86□□□□□ -2.27
NIP100YPL174C IZH4Q99393 312 aa0.86□□□□□ -2.27
NIP100YPL174C TAL1P15019 335 aaKnown RBP0.85□□□□□ -2.27
NIP100YPL174C CAB3P36076 571 aa0.85□□□□□ -2.27
NIP100YPL174C ADH5P38113 351 aaKnown RBP0.85□□□□□ -2.27
NIP100YPL174C PEX32P38292 413 aa0.85□□□□□ -2.27
NIP100YPL174C PET8P38921 284 aa0.85□□□□□ -2.27
NIP100YPL174C END3P39013 349 aa0.85□□□□□ -2.27
NIP100YPL174C SNX41Q04053 625 aa0.85□□□□□ -2.27
NIP100YPL174C DBP9Q06218 594 aaKnown RBP0.85□□□□□ -2.27
NIP100YPL174C TDH3P00359 332 aaKnown RBP RIP-Chip data0.85□□□□□ -2.27not detected
NIP100YPL174C RNR2P09938 399 aaKnown RBP0.85□□□□□ -2.27
NIP100YPL174C PRE7P23724 241 aaKnown RBP0.85□□□□□ -2.27
NIP100YPL174C RPL16BP26785 198 aaKnown RBP0.85□□□□□ -2.27
NIP100YPL174C SWC4P53201 476 aa0.85□□□□□ -2.27
NIP100YPL174C YLL007CQ07799 665 aa0.85□□□□□ -2.27
NIP100YPL174C YEL009C-AA0A023PZF2 135 aa0.85□□□□□ -2.27
NIP100YPL174C RAD7P06779 565 aa0.85□□□□□ -2.27
NIP100YPL174C IFM1P25038 676 aa0.85□□□□□ -2.27
NIP100YPL174C TDA11P38854 504 aa0.85□□□□□ -2.27
NIP100YPL174C BIO4P53630 237 aa0.85□□□□□ -2.27
NIP100YPL174C SWT21P53873 357 aaPredicted RBP0.85□□□□□ -2.27
NIP100YPL174C SEC13Q04491 297 aaKnown RBP0.85□□□□□ -2.27
NIP100YPL174C PRR2Q12310 699 aa0.85□□□□□ -2.27
NIP100YPL174C CDC42P19073 191 aa0.84□□□□□ -2.27
NIP100YPL174C YHR122WP38829 231 aa0.84□□□□□ -2.27
NIP100YPL174C POP2P39008 433 aa0.84□□□□□ -2.27
NIP100YPL174C YFL040WP43562 540 aa0.84□□□□□ -2.27
NIP100YPL174C MRS2Q01926 470 aa0.84□□□□□ -2.27
NIP100YPL174C SUE1Q06524 206 aa0.84□□□□□ -2.27
NIP100YPL174C YOR292CQ08743 309 aa0.84□□□□□ -2.27
NIP100YPL174C TIM22Q12328 207 aa0.84□□□□□ -2.27
NIP100YPL174C SNF2P22082 1703 aa0.84□□□□□ -2.27
NIP100YPL174C PAN1P32521 1480 aa0.84□□□□□ -2.28
NIP100YPL174C TPO5P36029 618 aa0.84□□□□□ -2.28
NIP100YPL174C PHO89P38361 574 aa0.84□□□□□ -2.28
NIP100YPL174C SSU72P53538 206 aaPredicted RBP0.84□□□□□ -2.28
NIP100YPL174C YNL095CP53932 642 aa0.84□□□□□ -2.28
NIP100YPL174C PBP4Q07362 185 aaKnown RBP0.84□□□□□ -2.28
NIP100YPL174C DCP1Q12517 231 aaPredicted RBP0.84□□□□□ -2.28
NIP100YPL174C RPL18AP0CX49 186 aaKnown RBP0.83□□□□□ -2.28
NIP100YPL174C RPL18BP0CX50 186 aaKnown RBP0.83□□□□□ -2.28
NIP100YPL174C MBA1P38300 278 aa0.83□□□□□ -2.28
NIP100YPL174C AVT6P40074 448 aa0.83□□□□□ -2.28
NIP100YPL174C SPO77Q06134 477 aa0.83□□□□□ -2.28
NIP100YPL174C SKS1Q12505 502 aa0.83□□□□□ -2.28
NIP100YPL174C SWD2P36104 329 aaPredicted RBP0.83□□□□□ -2.28
NIP100YPL174C YHR035WP38769 630 aa0.83□□□□□ -2.28
NIP100YPL174C SOP4P39543 234 aaPredicted RBP0.83□□□□□ -2.28
NIP100YPL174C YFL064CP43540 174 aa0.83□□□□□ -2.28
NIP100YPL174C COG7P53195 279 aa0.83□□□□□ -2.28
NIP100YPL174C YMR209CQ03648 457 aa0.83□□□□□ -2.28
NIP100YPL174C PML1Q07930 204 aaPredicted RBP0.83□□□□□ -2.28
NIP100YPL174C YDR262WQ12331 272 aa0.83□□□□□ -2.28
NIP100YPL174C TDH1P00360 332 aaKnown RBP0.82□□□□□ -2.28
NIP100YPL174C BUD2P33314 1104 aa0.82□□□□□ -2.28
NIP100YPL174C MRPL3P36516 390 aa0.82□□□□□ -2.28
NIP100YPL174C YER084WP40057 128 aa0.82□□□□□ -2.28
NIP100YPL174C UTP25P40498 721 aaKnown RBP0.82□□□□□ -2.28
NIP100YPL174C YLR012CQ07927 99 aa0.82□□□□□ -2.28
NIP100YPL174C SIN3P22579 1536 aa0.82□□□□□ -2.28
NIP100YPL174C YJR141WP47172 347 aaPredicted RBP0.82□□□□□ -2.28
NIP100YPL174C UFD1P53044 361 aa0.82□□□□□ -2.28
NIP100YPL174C YPR064WQ12492 139 aa0.82□□□□□ -2.28
NIP100YPL174C TDH2P00358 332 aaKnown RBP0.81□□□□□ -2.28
NIP100YPL174C SIF2P38262 535 aa0.81□□□□□ -2.28
NIP100YPL174C BAT2P47176 376 aaKnown RBP0.81□□□□□ -2.28
NIP100YPL174C PDR16P53860 351 aaKnown RBP0.81□□□□□ -2.28
NIP100YPL174C UBX2Q04228 584 aa0.81□□□□□ -2.28
NIP100YPL174C YMR316C-AI2HB70 103 aa0.81□□□□□ -2.28
NIP100YPL174C PHO80P20052 293 aa0.81□□□□□ -2.28
NIP100YPL174C SEN34P39707 275 aa0.81□□□□□ -2.28
NIP100YPL174C SYS1P41544 203 aa0.81□□□□□ -2.28
NIP100YPL174C YFR054CP43622 192 aa0.81□□□□□ -2.28
NIP100YPL174C OSH6Q02201 448 aa0.81□□□□□ -2.28
NIP100YPL174C GRH1Q04410 372 aaKnown RBP0.81□□□□□ -2.28
NIP100YPL174C YOR283WQ12040 230 aaKnown RBP0.81□□□□□ -2.28
NIP100YPL174C GAL3P13045 520 aa0.8□□□□□ -2.28
NIP100YPL174C GCG1P32656 232 aaKnown RBP0.8□□□□□ -2.28
NIP100YPL174C GPX1P36014 167 aa0.8□□□□□ -2.28
NIP100YPL174C LIF1P53150 421 aa0.8□□□□□ -2.28
NIP100YPL174C YLR297WQ05899 129 aa0.8□□□□□ -2.28
NIP100YPL174C YLR446WQ06204 433 aa0.8□□□□□ -2.28
NIP100YPL174C PLB3Q08108 686 aa0.8□□□□□ -2.28
NIP100YPL174C RTC5Q12108 567 aaKnown RBP0.8□□□□□ -2.28
NIP100YPL174C POM33Q12164 279 aa0.8□□□□□ -2.28
NIP100YPL174C KRE6P32486 720 aa0.8□□□□□ -2.28
NIP100YPL174C YEL043WP32618 956 aa0.8□□□□□ -2.28
NIP100YPL174C BLI1P35727 113 aa0.8□□□□□ -2.28
NIP100YPL174C TRM7P38238 310 aaKnown RBP0.8□□□□□ -2.28
NIP100YPL174C KEL2P50090 882 aa0.8□□□□□ -2.28
NIP100YPL174C YMR166CQ03829 368 aa0.8□□□□□ -2.28
NIP100YPL174C OSM1P21375 501 aaKnown RBP0.79□□□□□ -2.28
NIP100YPL174C VPH1P32563 840 aaKnown RBP0.79□□□□□ -2.28
NIP100YPL174C SWI3P32591 825 aa0.79□□□□□ -2.28
NIP100YPL174C COY1P34237 679 aa0.79□□□□□ -2.28
NIP100YPL174C YHL044WP38727 235 aa0.79□□□□□ -2.28
NIP100YPL174C SPL2P38839 148 aa0.79□□□□□ -2.28
NIP100YPL174C ACT1P60010 375 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms