RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W TDH3P00359 332 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
UBP16YPL072W ASP3-2P0CX77 362 aa2.13□□□□□ -2.07
UBP16YPL072W ASP3-3P0CX78 362 aa2.13□□□□□ -2.07
UBP16YPL072W ASP3-4P0CX79 362 aa2.13□□□□□ -2.07
UBP16YPL072W ASP3-1P0CZ17 362 aa2.13□□□□□ -2.07
UBP16YPL072W CDC42P19073 191 aa2.13□□□□□ -2.07
UBP16YPL072W MRPL20P22354 195 aaPredicted RBP2.13□□□□□ -2.07
UBP16YPL072W PMT2P31382 759 aa2.13□□□□□ -2.07
UBP16YPL072W SRB4P32569 687 aa2.13□□□□□ -2.07
UBP16YPL072W PDC2P32896 925 aa2.13□□□□□ -2.07
UBP16YPL072W MCH2P36032 473 aa2.13□□□□□ -2.07
UBP16YPL072W TAE1P38340 232 aa2.13□□□□□ -2.07
UBP16YPL072W HSM3P38348 480 aa2.13□□□□□ -2.07
UBP16YPL072W YHR045WP38775 560 aa2.13□□□□□ -2.07
UBP16YPL072W SOP4P39543 234 aaPredicted RBP2.13□□□□□ -2.07
UBP16YPL072W FMC1P40491 155 aa2.13□□□□□ -2.07
UBP16YPL072W STB1P42845 420 aa2.13□□□□□ -2.07
UBP16YPL072W BIO3P50277 480 aa2.13□□□□□ -2.07
UBP16YPL072W CDH1P53197 566 aa2.13□□□□□ -2.07
UBP16YPL072W VAC7P53950 1165 aa2.13□□□□□ -2.07
UBP16YPL072W ALG11P53954 548 aaKnown RBP2.13□□□□□ -2.07
UBP16YPL072W KTR6P54070 446 aa2.13□□□□□ -2.07
UBP16YPL072W YMR209CQ03648 457 aa2.13□□□□□ -2.07
UBP16YPL072W YDR115WQ04598 105 aa2.13□□□□□ -2.07
UBP16YPL072W YLR177WQ06251 628 aa2.13□□□□□ -2.07
UBP16YPL072W CTS2Q06350 511 aa2.13□□□□□ -2.07
UBP16YPL072W RPN8Q08723 338 aaKnown RBP2.13□□□□□ -2.07
UBP16YPL072W SGT2Q12118 346 aaKnown RBP2.13□□□□□ -2.07
UBP16YPL072W PER33Q12144 273 aa2.13□□□□□ -2.07
UBP16YPL072W TY3A-GQ12173 290 aa2.13□□□□□ -2.07
UBP16YPL072W YPL245WQ12179 454 aaKnown RBP2.13□□□□□ -2.07
UBP16YPL072W RPL21BQ12672 160 aaKnown RBP2.13□□□□□ -2.07
UBP16YPL072W LAG2Q92325 660 aa2.13□□□□□ -2.07
UBP16YPL072W TY3A-IQ99219 290 aa2.13□□□□□ -2.07
UBP16YPL072W HIS1P00498 297 aaKnown RBP2.12□□□□□ -2.07
UBP16YPL072W TFS1P14306 219 aa2.12□□□□□ -2.07
UBP16YPL072W BGL2P15703 313 aaKnown RBP2.12□□□□□ -2.07
UBP16YPL072W YCR016WP25617 290 aaKnown RBP2.12□□□□□ -2.07
UBP16YPL072W IMP3P32899 183 aaPredicted RBP2.12□□□□□ -2.07
UBP16YPL072W CSE1P33307 960 aa2.12□□□□□ -2.07
UBP16YPL072W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
UBP16YPL072W EFM1P38732 585 aa2.12□□□□□ -2.07
UBP16YPL072W BFR1P38934 470 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
UBP16YPL072W HEM14P40012 539 aa2.12□□□□□ -2.07
UBP16YPL072W COA1P40452 197 aa2.12□□□□□ -2.07
UBP16YPL072W SHQ1P40486 507 aaPredicted RBP2.12□□□□□ -2.07
UBP16YPL072W UBC13P52490 153 aa2.12□□□□□ -2.07
UBP16YPL072W YGL262WP53054 175 aa2.12□□□□□ -2.07
UBP16YPL072W BOP2Q06150 570 aa2.12□□□□□ -2.07
UBP16YPL072W VIK1Q12045 647 aa2.12□□□□□ -2.07
UBP16YPL072W BI3Q9ZZW7 517 aa2.12□□□□□ -2.07
UBP16YPL072W MSF1P08425 469 aa2.12□□□□□ -2.07
UBP16YPL072W RRT12P25381 491 aa2.12□□□□□ -2.07
UBP16YPL072W RPT5P33297 434 aaKnown RBP2.12□□□□□ -2.07
UBP16YPL072W CBF5P33322 483 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
UBP16YPL072W MSN4P33749 630 aa2.12□□□□□ -2.07
UBP16YPL072W SLM1P40485 686 aa2.12□□□□□ -2.07
UBP16YPL072W GDS1P41913 522 aa2.12□□□□□ -2.07
UBP16YPL072W IGD1P43598 195 aa2.12□□□□□ -2.07
UBP16YPL072W YJR054WP47114 497 aa2.12□□□□□ -2.07
UBP16YPL072W YGR015CP53208 328 aa2.12□□□□□ -2.07
UBP16YPL072W LSB1P53281 241 aa2.12□□□□□ -2.07
UBP16YPL072W SRL4Q03085 281 aa2.12□□□□□ -2.07
UBP16YPL072W YDR209CQ03480 137 aa2.12□□□□□ -2.07
UBP16YPL072W GMC1Q04399 608 aa2.12□□□□□ -2.07
UBP16YPL072W FAR10Q06001 478 aa2.12□□□□□ -2.07
UBP16YPL072W CTR3Q06686 241 aa2.12□□□□□ -2.07
UBP16YPL072W MMT2Q08970 484 aa2.12□□□□□ -2.07
UBP16YPL072W SRO7Q12038 1033 aa2.12□□□□□ -2.07
UBP16YPL072W COX2P00410 251 aa2.11□□□□□ -2.07
UBP16YPL072W POL30P15873 258 aaKnown RBP2.11□□□□□ -2.07
UBP16YPL072W CWP1P28319 239 aa2.11□□□□□ -2.07
UBP16YPL072W SUA5P32579 426 aa2.11□□□□□ -2.07
UBP16YPL072W CYM1P32898 989 aa2.11□□□□□ -2.07
UBP16YPL072W SPT4P32914 102 aaPredicted RBP2.11□□□□□ -2.07
UBP16YPL072W BMH2P34730 273 aaKnown RBP2.11□□□□□ -2.07
UBP16YPL072W MRPL27P36526 146 aaPredicted RBP2.11□□□□□ -2.07
UBP16YPL072W YPC1P38298 316 aa2.11□□□□□ -2.07
UBP16YPL072W SHC1P39000 512 aa2.11□□□□□ -2.07
UBP16YPL072W PRM9P39551 298 aa2.11□□□□□ -2.07
UBP16YPL072W DDI1P40087 428 aa2.11□□□□□ -2.07
UBP16YPL072W YAR1P46683 200 aa2.11□□□□□ -2.07
UBP16YPL072W COG7P53195 279 aa2.11□□□□□ -2.07
UBP16YPL072W OST6Q03723 332 aa2.11□□□□□ -2.07
UBP16YPL072W PIN3Q06449 215 aa2.11□□□□□ -2.07
UBP16YPL072W MCH1Q07376 486 aa2.11□□□□□ -2.07
UBP16YPL072W PAM18Q07914 168 aa2.11□□□□□ -2.07
UBP16YPL072W YPS3Q12303 508 aa2.11□□□□□ -2.07
UBP16YPL072W PRM7Q12459 698 aa2.11□□□□□ -2.07
UBP16YPL072W CFT1Q06632 1357 aaKnown RBP2.1□□□□□ -2.07
UBP16YPL072W SAL1D6W196 494 aa2.1□□□□□ -2.07
UBP16YPL072W SHE3P38272 425 aaKnown RBP2.1□□□□□ -2.07
UBP16YPL072W CHL4P38907 458 aa2.1□□□□□ -2.07
UBP16YPL072W GCN20P43535 752 aaKnown RBP2.1□□□□□ -2.07
UBP16YPL072W TIM21P53220 239 aa2.1□□□□□ -2.07
UBP16YPL072W VHT1P53241 593 aa2.1□□□□□ -2.07
UBP16YPL072W IGO1P53897 168 aa2.1□□□□□ -2.07
UBP16YPL072W MRX11Q03079 207 aa2.1□□□□□ -2.07
UBP16YPL072W VBA1Q04301 562 aa2.1□□□□□ -2.07
UBP16YPL072W DPP1Q05521 289 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms