RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C CLB6P32943 380 aa3.8□□□□□ -1.8
VHS3YOR054C COS9P36034 407 aa3.8□□□□□ -1.8
VHS3YOR054C DOA1P36037 715 aa3.8□□□□□ -1.8
VHS3YOR054C MRPL4P36517 319 aa3.8□□□□□ -1.8
VHS3YOR054C SRO77P38163 1010 aa3.8□□□□□ -1.8
VHS3YOR054C TSL1P38427 1098 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C EFM1P38732 585 aa3.8□□□□□ -1.8
VHS3YOR054C YHR035WP38769 630 aa3.8□□□□□ -1.8
VHS3YOR054C FIS1P40515 155 aa3.8□□□□□ -1.8
VHS3YOR054C YIR007WP40566 764 aa3.8□□□□□ -1.8
VHS3YOR054C AVT1P47082 602 aa3.8□□□□□ -1.8
VHS3YOR054C YJR149WP47177 404 aa3.8□□□□□ -1.8
VHS3YOR054C VPS73P53142 486 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C SYF2P53277 215 aaPredicted RBP3.8□□□□□ -1.8
VHS3YOR054C COQ6P53318 479 aa3.8□□□□□ -1.8
VHS3YOR054C MEP3P53390 489 aa3.8□□□□□ -1.8
VHS3YOR054C BRE5P53741 515 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C IBD2P53892 351 aa3.8□□□□□ -1.8
VHS3YOR054C CYT2Q00873 224 aa3.8□□□□□ -1.8
VHS3YOR054C AAT1Q01802 451 aa3.8□□□□□ -1.8
VHS3YOR054C CTL1Q03220 320 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C SHH3Q04487 196 aa3.8□□□□□ -1.8
VHS3YOR054C YLR446WQ06204 433 aa3.8□□□□□ -1.8
VHS3YOR054C AIM6Q07716 390 aa3.8□□□□□ -1.8
VHS3YOR054C IZH3Q07959 543 aa3.8□□□□□ -1.8
VHS3YOR054C ATG41Q12048 136 aa3.8□□□□□ -1.8
VHS3YOR054C TMS1Q12116 473 aa3.8□□□□□ -1.8
VHS3YOR054C YOL114CQ12322 202 aa3.8□□□□□ -1.8
VHS3YOR054C SNF8Q12483 233 aa3.8□□□□□ -1.8
VHS3YOR054C TMA17Q12513 150 aa3.8□□□□□ -1.8
VHS3YOR054C PCD1Q12524 340 aa3.8□□□□□ -1.8
VHS3YOR054C EFG1Q3E705 233 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C YDL085C-AQ3E7B7 68 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C YNR034W-AQ3E841 98 aa3.8□□□□□ -1.8
VHS3YOR054C COA6Q3E846 104 aa3.8□□□□□ -1.8
VHS3YOR054C RAS2P01120 322 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C PRB1P09232 635 aa3.8□□□□□ -1.8
VHS3YOR054C EPT1P22140 391 aa3.8□□□□□ -1.8
VHS3YOR054C AAT2P23542 418 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C PET18P25362 215 aa3.8□□□□□ -1.8
VHS3YOR054C ARE1P25628 610 aa3.8□□□□□ -1.8
VHS3YOR054C MSK1P32048 576 aa3.8□□□□□ -1.8
VHS3YOR054C YPT7P32939 208 aa3.8□□□□□ -1.8
VHS3YOR054C SFK1P35735 353 aa3.8□□□□□ -1.8
VHS3YOR054C TVP38P36164 337 aa3.8□□□□□ -1.8
VHS3YOR054C HMT1P38074 348 aa3.8□□□□□ -1.8
VHS3YOR054C YMC2P38087 329 aa3.8□□□□□ -1.8
VHS3YOR054C SHE3P38272 425 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C CHS7P38843 316 aa3.8□□□□□ -1.8
VHS3YOR054C ASP1P38986 381 aaPredicted RBP3.8□□□□□ -1.8
VHS3YOR054C AYR1P40471 297 aa3.8□□□□□ -1.8
VHS3YOR054C FMC1P40491 155 aa3.8□□□□□ -1.8
VHS3YOR054C FKH2P41813 862 aa3.8□□□□□ -1.8
VHS3YOR054C YJR012CP47087 207 aa3.8□□□□□ -1.8
VHS3YOR054C AVT4P50944 713 aa3.8□□□□□ -1.8
VHS3YOR054C TIM21P53220 239 aa3.8□□□□□ -1.8
VHS3YOR054C ASI3P53983 676 aa3.8□□□□□ -1.8
VHS3YOR054C YKR011CQ02209 353 aa3.8□□□□□ -1.8
VHS3YOR054C YPL067CQ02754 198 aa3.8□□□□□ -1.8
VHS3YOR054C MSC1Q03104 513 aa3.8□□□□□ -1.8
VHS3YOR054C RIM13Q03792 727 aa3.8□□□□□ -1.8
VHS3YOR054C ATC1Q04005 294 aa3.8□□□□□ -1.8
VHS3YOR054C VBA4Q04602 768 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C YLR179CQ06252 201 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C TIR4Q12218 487 aaPredicted RBP3.8□□□□□ -1.8
VHS3YOR054C YJR112W-AQ3E743 109 aa3.8□□□□□ -1.8
VHS3YOR054C YDR034W-BQ6Q5X2 51 aa3.8□□□□□ -1.8
VHS3YOR054C CET1O13297 549 aaPredicted RBP3.79□□□□□ -1.8
VHS3YOR054C CAN1P04817 590 aa3.79□□□□□ -1.8
VHS3YOR054C SGA1P08019 549 aa3.79□□□□□ -1.8
VHS3YOR054C SNF5P18480 905 aa3.79□□□□□ -1.8
VHS3YOR054C KIN82P25341 720 aa3.79□□□□□ -1.8
VHS3YOR054C RER1P25560 188 aa3.79□□□□□ -1.8
VHS3YOR054C YIH1P25637 258 aa3.79□□□□□ -1.8
VHS3YOR054C MRP17P28778 131 aa3.79□□□□□ -1.8
VHS3YOR054C SKT5P34226 696 aa3.79□□□□□ -1.8
VHS3YOR054C YBR053CP38235 358 aa3.79□□□□□ -1.8
VHS3YOR054C SFB3P38810 929 aa3.79□□□□□ -1.8
VHS3YOR054C FLX1P40464 311 aa3.79□□□□□ -1.8
VHS3YOR054C ICE2P40499 491 aa3.79□□□□□ -1.8
VHS3YOR054C GAB1P41733 394 aa3.79□□□□□ -1.8
VHS3YOR054C PAM16P42949 149 aa3.79□□□□□ -1.8
VHS3YOR054C GAT1P43574 510 aa3.79□□□□□ -1.8
VHS3YOR054C SOL1P50278 321 aa3.79□□□□□ -1.8
VHS3YOR054C YGR283CP53336 341 aaPredicted RBP3.79□□□□□ -1.8
VHS3YOR054C SSU72P53538 206 aaPredicted RBP3.79□□□□□ -1.8
VHS3YOR054C FRE4P53746 719 aa3.79□□□□□ -1.8
VHS3YOR054C TPS1Q00764 495 aaKnown RBP3.79□□□□□ -1.8
VHS3YOR054C YSA1Q01976 231 aa3.79□□□□□ -1.8
VHS3YOR054C ARG7Q04728 441 aa3.79□□□□□ -1.8
VHS3YOR054C RTN1Q04947 295 aaKnown RBP3.79□□□□□ -1.8
VHS3YOR054C MRX9Q07349 420 aaKnown RBP3.79□□□□□ -1.8
VHS3YOR054C SNA4Q07549 140 aa3.79□□□□□ -1.8
VHS3YOR054C SRO7Q12038 1033 aa3.79□□□□□ -1.8
VHS3YOR054C TY1A-NL1Q12391 440 aaKnown RBP3.79□□□□□ -1.8
VHS3YOR054C YOP1Q12402 180 aa3.79□□□□□ -1.8
VHS3YOR054C TFC7Q12415 435 aa3.79□□□□□ -1.8
VHS3YOR054C SKS1Q12505 502 aa3.79□□□□□ -1.8
VHS3YOR054C HXK2P04807 486 aaKnown RBP3.78□□□□□ -1.8
VHS3YOR054C UNG1P12887 359 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms