RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene SNN1, Length 309 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNN1	YNL086W	NUP1	P20676	1076 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	PUP2	P32379	260 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	HOT13	P36078	116 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	OLA1	P38219	394 aa	Known RBP	5.23	□□□□□ -1.57
SNN1	YNL086W	NTC20	P38302	140 aa	Predicted RBP	5.23	□□□□□ -1.57
SNN1	YNL086W	LYS12	P40495	371 aa	Known RBP	5.23	□□□□□ -1.57
SNN1	YNL086W	TAX4	P47030	604 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	URB2	P47108	1174 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	NCE101	Q02820	53 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	API2	Q04413	109 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	RNH1	Q04740	348 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	FRE3	Q08905	711 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	RIO1	Q12196	484 aa	Known RBP	5.23	□□□□□ -1.57
SNN1	YNL086W	BLM10	P43583	2143 aa		5.23	□□□□□ -1.57
SNN1	YNL086W	CAR1	P00812	333 aa	Known RBP	5.22	□□□□□ -1.57
SNN1	YNL086W	TFS1	P14306	219 aa		5.22	□□□□□ -1.57
SNN1	YNL086W	MRPL25	P23369	157 aa		5.22	□□□□□ -1.57
SNN1	YNL086W	ELO2	P25358	347 aa		5.22	□□□□□ -1.57
SNN1	YNL086W	ILV6	P25605	309 aa	Known RBP	5.22	□□□□□ -1.57
SNN1	YNL086W	TOA1	P32773	286 aa		5.22	□□□□□ -1.57
SNN1	YNL086W	YNL208W	P40159	199 aa	Known RBP	5.22	□□□□□ -1.57
SNN1	YNL086W	IDP2	P41939	412 aa		5.22	□□□□□ -1.57
SNN1	YNL086W	IRC7	P43623	340 aa		5.22	□□□□□ -1.57
SNN1	YNL086W	EAF7	P53911	425 aa	Known RBP	5.22	□□□□□ -1.57
SNN1	YNL086W	SWP1	Q02795	286 aa		5.22	□□□□□ -1.57
SNN1	YNL086W	SNX41	Q04053	625 aa		5.22	□□□□□ -1.57
SNN1	YNL086W	CBP2	P03874	630 aa	Predicted RBP	5.21	□□□□□ -1.58
SNN1	YNL086W	SPS4	P09937	338 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	DBF2	P22204	572 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	RAD14	P28519	371 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	HIR2	P32480	875 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	CYS4	P32582	507 aa	Known RBP	5.21	□□□□□ -1.58
SNN1	YNL086W	CAT2	P32796	670 aa	Known RBP	5.21	□□□□□ -1.58
SNN1	YNL086W	YBR220C	P38318	560 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	NSG1	P38837	291 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	MTC6	P38849	526 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	YHB1	P39676	399 aa	Known RBP	5.21	□□□□□ -1.58
SNN1	YNL086W	PRE6	P40303	254 aa	Known RBP	5.21	□□□□□ -1.58
SNN1	YNL086W	PSA1	P41940	361 aa	Known RBP	5.21	□□□□□ -1.58
SNN1	YNL086W	YFR054C	P43622	192 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	LSG1	P53145	640 aa	Known RBP	5.21	□□□□□ -1.58
SNN1	YNL086W	ATP23	P53722	227 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	MNT4	P53745	580 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	SHR3	Q02774	210 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	HOT1	Q03213	719 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	MSA1	Q08471	629 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	SLF1	Q12034	447 aa	Known RBP	5.21	□□□□□ -1.58
SNN1	YNL086W	PSY3	Q12318	242 aa		5.21	□□□□□ -1.58
SNN1	YNL086W	RPB8	P20436	146 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	URE2	P23202	354 aa	Known RBP	5.2	□□□□□ -1.58
SNN1	YNL086W	BUB2	P26448	306 aa	Predicted RBP	5.2	□□□□□ -1.58
SNN1	YNL086W	RPB9	P27999	122 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	RPN2	P32565	945 aa	Known RBP	5.2	□□□□□ -1.58
SNN1	YNL086W	SEC17	P32602	292 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	LTV1	P34078	463 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	MRPL39	P36533	70 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	YGR149W	P48236	432 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	IDP3	P53982	420 aa	Known RBP	5.2	□□□□□ -1.58
SNN1	YNL086W	SKO1	Q02100	647 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	COQ11	Q05892	277 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	ORM2	Q06144	216 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	YLR036C	Q07986	203 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	YLR053C	Q12026	108 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	YDL180W	Q12301	547 aa		5.2	□□□□□ -1.58
SNN1	YNL086W	RHO2	P06781	192 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	RRP7	P25368	297 aa	Predicted RBP	5.19	□□□□□ -1.58
SNN1	YNL086W	SSE1	P32589	693 aa	Known RBP	5.19	□□□□□ -1.58
SNN1	YNL086W	PPZ2	P33329	710 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	LOS1	P33418	1100 aa	Predicted RBP	5.19	□□□□□ -1.58
SNN1	YNL086W	YHL044W	P38727	235 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	MBB1	P39534	108 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	AYR1	P40471	297 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	ATG27	P46989	271 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	GTO1	P48239	356 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	IRC15	Q02733	499 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	YPL039W	Q03080	316 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	ECM11	Q04110	302 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	ARP10	Q04549	284 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	COX20	Q04935	205 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	VPS74	Q06385	345 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	THP1	Q08231	455 aa		5.19	□□□□□ -1.58
SNN1	YNL086W	PEP4	P07267	405 aa	Known RBP	5.18	□□□□□ -1.58
SNN1	YNL086W	PBN1	P25580	416 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	KRR1	P25586	316 aa	Predicted RBP	5.18	□□□□□ -1.58
SNN1	YNL086W	ITR1	P30605	584 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	AFG1	P32317	509 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	RPS0A	P32905	252 aa	Known RBP	5.18	□□□□□ -1.58
SNN1	YNL086W	ROT2	P38138	954 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	SLM4	P38247	162 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	STP2	P38704	541 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	YER188W	P40103	239 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	LSC1	P53598	329 aa	Known RBP	5.18	□□□□□ -1.58
SNN1	YNL086W	GOR1	P53839	350 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	RHO5	P53879	331 aa	Known RBP	5.18	□□□□□ -1.58
SNN1	YNL086W	EOS1	P53938	366 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	MRPL1	Q04599	285 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	YMR310C	Q04867	317 aa	Predicted RBP	5.18	□□□□□ -1.58
SNN1	YNL086W	STE23	Q06010	1027 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	YOL019W	Q08157	551 aa		5.18	□□□□□ -1.58
SNN1	YNL086W	DCI1	Q08558	271 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms