RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W SDS22P36047 338 aa3.5□□□□□ -1.85
ECM16YMR128W MET28P40573 187 aa3.5□□□□□ -1.85
ECM16YMR128W SNN1P48232 102 aa3.5□□□□□ -1.85
ECM16YMR128W EXG2P52911 562 aa3.5□□□□□ -1.85
ECM16YMR128W NSE5Q03718 556 aa3.5□□□□□ -1.85
ECM16YMR128W TPP1Q03796 238 aa3.5□□□□□ -1.85
ECM16YMR128W RTN1Q04947 295 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W KEI1Q06346 221 aa3.5□□□□□ -1.85
ECM16YMR128W PDA1P16387 420 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W DBF20P32328 564 aa3.5□□□□□ -1.85
ECM16YMR128W SPS19P32573 292 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W SUA5P32579 426 aa3.5□□□□□ -1.85
ECM16YMR128W SKN1P33336 771 aa3.5□□□□□ -1.85
ECM16YMR128W MTH1P35198 433 aa3.5□□□□□ -1.85
ECM16YMR128W YBR063CP38083 404 aa3.5□□□□□ -1.85
ECM16YMR128W MNT3P40549 630 aa3.5□□□□□ -1.85
ECM16YMR128W VOA1P53262 265 aa3.5□□□□□ -1.85
ECM16YMR128W YSA1Q01976 231 aa3.5□□□□□ -1.85
ECM16YMR128W YKR011CQ02209 353 aa3.5□□□□□ -1.85
ECM16YMR128W YDR541CQ03049 344 aa3.5□□□□□ -1.85
ECM16YMR128W RPC11Q04307 110 aaPredicted RBP3.5□□□□□ -1.85
ECM16YMR128W CRR1Q05790 422 aa3.5□□□□□ -1.85
ECM16YMR128W PDH1Q12428 516 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W YPR064WQ12492 139 aa3.5□□□□□ -1.85
ECM16YMR128W SKS1Q12505 502 aa3.5□□□□□ -1.85
ECM16YMR128W COX3P00420 269 aa3.49□□□□□ -1.85
ECM16YMR128W EXG1P23776 448 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W MRPL36P36531 177 aa3.49□□□□□ -1.85
ECM16YMR128W TAT1P38085 619 aa3.49□□□□□ -1.85
ECM16YMR128W DBP8P38719 431 aa3.49□□□□□ -1.85
ECM16YMR128W MMF1P40185 145 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W LYS12P40495 371 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W PHB1P40961 287 aa3.49□□□□□ -1.85
ECM16YMR128W PAC10P48363 199 aa3.49□□□□□ -1.85
ECM16YMR128W GOR1P53839 350 aa3.49□□□□□ -1.85
ECM16YMR128W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
ECM16YMR128W YPL113CQ02961 396 aa3.49□□□□□ -1.85
ECM16YMR128W REP2P03872 296 aa3.49□□□□□ -1.85
ECM16YMR128W ADE8P04161 214 aa3.49□□□□□ -1.85
ECM16YMR128W REV1P12689 985 aa3.49□□□□□ -1.85
ECM16YMR128W SED4P25365 1065 aa3.49□□□□□ -1.85
ECM16YMR128W BOS1P25385 244 aa3.49□□□□□ -1.85
ECM16YMR128W ATS1P31386 333 aa3.49□□□□□ -1.85
ECM16YMR128W COQ2P32378 372 aa3.49□□□□□ -1.85
ECM16YMR128W MGM101P32787 269 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W CDC13P32797 924 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W PDC2P32896 925 aa3.49□□□□□ -1.85
ECM16YMR128W SUR1P33300 382 aa3.49□□□□□ -1.85
ECM16YMR128W SHM2P37291 469 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W MTC4P38335 694 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W SAF1P38352 637 aa3.49□□□□□ -1.85
ECM16YMR128W AXL2P38928 823 aa3.49□□□□□ -1.85
ECM16YMR128W PSA1P41940 361 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W DPB11P47027 764 aaPredicted RBP3.49□□□□□ -1.85
ECM16YMR128W PYK2P52489 506 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W PMT5P52867 743 aa3.49□□□□□ -1.85
ECM16YMR128W PRM1P53835 661 aa3.49□□□□□ -1.85
ECM16YMR128W KAP120Q02932 1032 aa3.49□□□□□ -1.85
ECM16YMR128W ODC1Q03028 310 aa3.49□□□□□ -1.85
ECM16YMR128W CTK1Q03957 528 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W YDL007C-AQ2V2Q0 85 aa3.49□□□□□ -1.85
ECM16YMR128W YDR524C-BQ3E6R4 66 aa3.49□□□□□ -1.85
ECM16YMR128W ARG80P07249 177 aa3.49□□□□□ -1.85
ECM16YMR128W YGL041W-AP0C5N3 154 aa3.49□□□□□ -1.85
ECM16YMR128W PUB1P32588 453 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
ECM16YMR128W RPF2P36160 344 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W SCO2P38072 301 aa3.49□□□□□ -1.85
ECM16YMR128W AIM3P38266 947 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W PEX32P38292 413 aa3.49□□□□□ -1.85
ECM16YMR128W MET30P39014 640 aa3.49□□□□□ -1.85
ECM16YMR128W MCM22P47167 239 aa3.49□□□□□ -1.85
ECM16YMR128W OKP1P53298 406 aa3.49□□□□□ -1.85
ECM16YMR128W DUS1P53759 423 aaKnown RBP3.49□□□□□ -1.85
ECM16YMR128W SNO1Q03144 224 aa3.49□□□□□ -1.85
ECM16YMR128W TDA1Q03533 586 aa3.49□□□□□ -1.85
ECM16YMR128W ROT1Q03691 256 aa3.49□□□□□ -1.85
ECM16YMR128W YPR091CQ06833 770 aa3.49□□□□□ -1.85
ECM16YMR128W GRC3Q07845 632 aa3.49□□□□□ -1.85
ECM16YMR128W ERG24P32462 438 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W SGE1P33335 543 aa3.48□□□□□ -1.85
ECM16YMR128W WBP1P33767 430 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W IML3P38265 245 aa3.48□□□□□ -1.85
ECM16YMR128W ECM34P38728 170 aa3.48□□□□□ -1.85
ECM16YMR128W CHL4P38907 458 aa3.48□□□□□ -1.85
ECM16YMR128W YIL166CP40445 542 aa3.48□□□□□ -1.85
ECM16YMR128W NSE4P43124 402 aa3.48□□□□□ -1.85
ECM16YMR128W LSM1P47017 172 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W NUP57P48837 541 aa3.48□□□□□ -1.85
ECM16YMR128W SDT1P53078 280 aa3.48□□□□□ -1.85
ECM16YMR128W MPS2P53159 387 aa3.48□□□□□ -1.85
ECM16YMR128W GTF1P53260 183 aaPredicted RBP3.48□□□□□ -1.85
ECM16YMR128W SAY1P53324 424 aa3.48□□□□□ -1.85
ECM16YMR128W YMR130WQ04223 302 aa3.48□□□□□ -1.85
ECM16YMR128W MRI1Q06489 411 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W RRP12Q12754 1228 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W PCC1Q3E833 88 aa3.48□□□□□ -1.85
ECM16YMR128W EPT1P22140 391 aa3.48□□□□□ -1.85
ECM16YMR128W RFA2P26754 273 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W CTS1P29029 562 aa3.48□□□□□ -1.85
ECM16YMR128W SHE2P36068 246 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms