RNA–Protein interactions for RNA: YLL029W

FRA1, Transcript of Protein involved in negative regulation of iron regulon transcription, yeast

Gene FRA1, Length 2,250 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRA1	YLL029W	TY1A-BR	Q12217	440 aa		7.53	□□□□□ -1.2
FRA1	YLL029W	TRM11	Q12463	433 aa		7.53	□□□□□ -1.2
FRA1	YLL029W	UBA3	Q99344	299 aa		7.53	□□□□□ -1.2
FRA1	YLL029W	YPR117W	Q06116	2489 aa		7.52	□□□□□ -1.2
FRA1	YLL029W	YFR010W-A	P0C5N0	62 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	FRE1	P32791	686 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	IXR1	P33417	597 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	7.52	□□□□□ -1.21	not detected
FRA1	YLL029W	SRP68	P38687	599 aa	Known RBP	7.52	□□□□□ -1.21
FRA1	YLL029W	IKI1	P38874	309 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	SKN7	P38889	622 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	MAD2	P40958	196 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	PYK2	P52489	506 aa	Known RBP	7.52	□□□□□ -1.21
FRA1	YLL029W	AAD4	Q07747	329 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	YKL033W-A	Q86ZR7	236 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	SOD2	P00447	233 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	ARP2	P32381	391 aa	Known RBP	7.52	□□□□□ -1.21
FRA1	YLL029W	YKR051W	P36142	418 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	MRPL24	P36525	258 aa	Predicted RBP	7.52	□□□□□ -1.21
FRA1	YLL029W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	7.52	□□□□□ -1.21	not detected
FRA1	YLL029W	IKS1	P47042	667 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	ABF2	Q02486	183 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	STD1	Q02794	444 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	YMR160W	Q03823	816 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	MRI1	Q06489	411 aa	Known RBP	7.52	□□□□□ -1.21
FRA1	YLL029W	MED7	Q08278	222 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	RMD5	Q12508	421 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	YJR112W-A	Q3E743	109 aa		7.52	□□□□□ -1.21
FRA1	YLL029W	PPZ1	P26570	692 aa		7.51	□□□□□ -1.21
FRA1	YLL029W	MRPL9	P31334	269 aa		7.51	□□□□□ -1.21
FRA1	YLL029W	ARN1	P38731	627 aa		7.51	□□□□□ -1.21
FRA1	YLL029W	BAT1	P38891	393 aa	Known RBP	7.51	□□□□□ -1.21
FRA1	YLL029W	YIR016W	P40572	265 aa		7.51	□□□□□ -1.21
FRA1	YLL029W	MIC19	P43594	170 aa		7.51	□□□□□ -1.21
FRA1	YLL029W	ERJ5	P43613	295 aa	Predicted RBP	7.51	□□□□□ -1.21
FRA1	YLL029W	ZAP1	P47043	880 aa		7.51	□□□□□ -1.21
FRA1	YLL029W	IRC8	P47046	822 aa		7.51	□□□□□ -1.21
FRA1	YLL029W	IRC10	Q08118	586 aa		7.51	□□□□□ -1.21
FRA1	YLL029W	PRP46	Q12417	451 aa	Predicted RBP	7.51	□□□□□ -1.21
FRA1	YLL029W	SLY41	P22215	453 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	UTR2	P32623	467 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	YNK1	P36010	153 aa	Known RBP	7.5	□□□□□ -1.21
FRA1	YLL029W	HAT2	P39984	401 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	GIP3	Q03016	1276 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	DIG2	Q03373	323 aa	Known RBP	7.5	□□□□□ -1.21
FRA1	YLL029W	TPP1	Q03796	238 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	SIZ1	Q04195	904 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	GPB1	Q08886	897 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.5	□□□□□ -1.21	not detected
FRA1	YLL029W	COX17	Q12287	69 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	RIB2	Q12362	591 aa	Known RBP	7.5	□□□□□ -1.21
FRA1	YLL029W	LPX1	Q12405	387 aa	Known RBP	7.5	□□□□□ -1.21
FRA1	YLL029W	GAL10	P04397	699 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	MAG1	P22134	296 aa	Known RBP	7.5	□□□□□ -1.21
FRA1	YLL029W	YPS1	P32329	569 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	IPI1	P38803	334 aa	Predicted RBP	7.5	□□□□□ -1.21
FRA1	YLL029W	CIN2	P46670	268 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	COS10	P52924	374 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	ADH6	Q04894	360 aa	Known RBP	7.5	□□□□□ -1.21
FRA1	YLL029W	BNA5	Q05979	453 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	IPK1	Q06667	281 aa		7.5	□□□□□ -1.21
FRA1	YLL029W	FOL3	Q12676	427 aa	Predicted RBP	7.5	□□□□□ -1.21
FRA1	YLL029W	YLR302C	O13544	120 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	MF(ALPHA)1	P01149	165 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	FLP1	P03870	423 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	RPP0	P05317	312 aa	Known RBP	7.49	□□□□□ -1.21
FRA1	YLL029W	SPS2	P08459	502 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	YEF1	P32622	495 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	ARP1	P38696	384 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	STE24	P47154	453 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	IDP3	P53982	420 aa	Known RBP	7.49	□□□□□ -1.21
FRA1	YLL029W	SMX3	P54999	86 aa	Predicted RBP	7.49	□□□□□ -1.21
FRA1	YLL029W	YOR059C	Q08448	450 aa	Known RBP	7.49	□□□□□ -1.21
FRA1	YLL029W	SAM4	Q08985	325 aa	Known RBP	7.49	□□□□□ -1.21
FRA1	YLL029W	SPE4	Q12455	300 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	CPR1	P14832	162 aa	Known RBP	7.49	□□□□□ -1.21
FRA1	YLL029W	CTA1	P15202	515 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	SAF1	P38352	637 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	MOB1	P40484	314 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	YJL107C	P42947	387 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	RPA43	P46669	326 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	BUD20	Q08004	166 aa	Predicted RBP	7.49	□□□□□ -1.21
FRA1	YLL029W	CSR2	Q12734	1121 aa		7.49	□□□□□ -1.21
FRA1	YLL029W	CYC3	P06182	269 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	YAL037W	P39728	267 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	YER158C	P40095	573 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	BST1	P43571	1029 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	SPT20	P50875	604 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	MGA1	P53050	456 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	GTF1	P53260	183 aa	Predicted RBP	7.48	□□□□□ -1.21
FRA1	YLL029W	APS2	Q00381	147 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	YPL068C	Q02749	293 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	TMA23	Q03525	211 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	CAC2	Q04199	468 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	YMR130W	Q04223	302 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	PST2	Q12335	198 aa	Known RBP	7.48	□□□□□ -1.21
FRA1	YLL029W	RDI1	Q12434	202 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	MRPL32	P25348	183 aa		7.48	□□□□□ -1.21
FRA1	YLL029W	PUT3	P25502	979 aa	Predicted RBP	7.48	□□□□□ -1.21
FRA1	YLL029W	SCD5	P34758	872 aa		7.48	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 93.6 ms