RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W IRC10Q08118 586 aa3.86□□□□□ -1.79
SOF1YLL011W SNX3Q08826 162 aaKnown RBP3.86□□□□□ -1.79
SOF1YLL011W CMC2Q3E7A4 109 aa3.86□□□□□ -1.79
SOF1YLL011W IZH4Q99393 312 aa3.86□□□□□ -1.79
SOF1YLL011W AUS1Q08409 1394 aa3.85□□□□□ -1.79
SOF1YLL011W YAP1P19880 650 aaKnown RBP3.85□□□□□ -1.79
SOF1YLL011W PRS2P38620 318 aaKnown RBP3.85□□□□□ -1.79
SOF1YLL011W MTC6P38849 526 aa3.85□□□□□ -1.79
SOF1YLL011W DFG10P40526 253 aa3.85□□□□□ -1.79
SOF1YLL011W MST27P53176 234 aa3.85□□□□□ -1.79
SOF1YLL011W HCH1P53834 153 aa3.85□□□□□ -1.79
SOF1YLL011W YDR209CQ03480 137 aa3.85□□□□□ -1.79
SOF1YLL011W DDC1Q08949 612 aa3.85□□□□□ -1.79
SOF1YLL011W TIP41Q12199 356 aa3.85□□□□□ -1.79
SOF1YLL011W YCR024C-BQ3E7Z8 88 aa3.85□□□□□ -1.79
SOF1YLL011W SEY1Q99287 776 aa3.85□□□□□ -1.79
SOF1YLL011W SAL1D6W196 494 aa3.84□□□□□ -1.8
SOF1YLL011W TUB1P09733 447 aaKnown RBP3.84□□□□□ -1.8
SOF1YLL011W POX1P13711 748 aa3.84□□□□□ -1.8
SOF1YLL011W CSE1P33307 960 aa3.84□□□□□ -1.8
SOF1YLL011W RIB5P38145 238 aa3.84□□□□□ -1.8
SOF1YLL011W YBR137WP38276 179 aa3.84□□□□□ -1.8
SOF1YLL011W THO1P40040 218 aaKnown RBP3.84□□□□□ -1.8
SOF1YLL011W YNL194CP40169 301 aa3.84□□□□□ -1.8
SOF1YLL011W CFD1P40558 293 aa3.84□□□□□ -1.8
SOF1YLL011W YRB1P41920 201 aaKnown RBP3.84□□□□□ -1.8
SOF1YLL011W RPC17P47076 161 aa3.84□□□□□ -1.8
SOF1YLL011W HOC1P47124 396 aa3.84□□□□□ -1.8
SOF1YLL011W CWC23P52868 283 aaPredicted RBP3.84□□□□□ -1.8
SOF1YLL011W VEL1P53058 206 aa3.84□□□□□ -1.8
SOF1YLL011W MTQ1P53944 314 aa3.84□□□□□ -1.8
SOF1YLL011W SNX41Q04053 625 aa3.84□□□□□ -1.8
SOF1YLL011W OSW1Q08692 278 aa3.84□□□□□ -1.8
SOF1YLL011W TMS1Q12116 473 aa3.84□□□□□ -1.8
SOF1YLL011W CRC1Q12289 327 aa3.84□□□□□ -1.8
SOF1YLL011W CSR2Q12734 1121 aa3.84□□□□□ -1.8
SOF1YLL011W YKL183C-AQ3E765 70 aa3.84□□□□□ -1.8
SOF1YLL011W RPL27AP0C2H6 136 aaKnown RBP3.83□□□□□ -1.8
SOF1YLL011W RPL27BP0C2H7 136 aaKnown RBP3.83□□□□□ -1.8
SOF1YLL011W MTF1P14908 341 aaKnown RBP3.83□□□□□ -1.8
SOF1YLL011W YMR31P19955 123 aa3.83□□□□□ -1.8
SOF1YLL011W POF1P25576 258 aa3.83□□□□□ -1.8
SOF1YLL011W CPR3P25719 182 aa3.83□□□□□ -1.8
SOF1YLL011W RPL16BP26785 198 aaKnown RBP3.83□□□□□ -1.8
SOF1YLL011W YPC1P38298 316 aa3.83□□□□□ -1.8
SOF1YLL011W UBP5P39944 805 aa3.83□□□□□ -1.8
SOF1YLL011W YER184CP39961 794 aa3.83□□□□□ -1.8
SOF1YLL011W JLP2P40206 208 aa3.83□□□□□ -1.8
SOF1YLL011W GDS1P41913 522 aa3.83□□□□□ -1.8
SOF1YLL011W IDP2P41939 412 aa3.83□□□□□ -1.8
SOF1YLL011W GLG2P47011 380 aa3.83□□□□□ -1.8
SOF1YLL011W IKS1P47042 667 aa3.83□□□□□ -1.8
SOF1YLL011W SLI1P53304 468 aa3.83□□□□□ -1.8
SOF1YLL011W YMR181CQ03231 154 aa3.83□□□□□ -1.8
SOF1YLL011W CDD1Q06549 142 aa3.83□□□□□ -1.8
SOF1YLL011W PNS1Q12412 539 aa3.83□□□□□ -1.8
SOF1YLL011W NCB2Q92317 146 aa3.83□□□□□ -1.8
SOF1YLL011W LAG2Q92325 660 aa3.83□□□□□ -1.8
SOF1YLL011W AI5_BETAQ9ZZX0 354 aa3.83□□□□□ -1.8
SOF1YLL011W YBR121C-AP0C5L4 52 aa3.82□□□□□ -1.8
SOF1YLL011W SPS100P13130 326 aa3.82□□□□□ -1.8
SOF1YLL011W GLN3P18494 730 aa3.82□□□□□ -1.8
SOF1YLL011W RNA15P25299 296 aaPredicted RBP3.82□□□□□ -1.8
SOF1YLL011W PEX3P28795 441 aa3.82□□□□□ -1.8
SOF1YLL011W PHA2P32452 334 aa3.82□□□□□ -1.8
SOF1YLL011W VPS21P36017 210 aaKnown RBP3.82□□□□□ -1.8
SOF1YLL011W MRX3P38172 270 aa3.82□□□□□ -1.8
SOF1YLL011W NPT1P39683 429 aaKnown RBP3.82□□□□□ -1.8
SOF1YLL011W DSN1P40568 576 aa3.82□□□□□ -1.8
SOF1YLL011W OST1P41543 476 aaKnown RBP3.82□□□□□ -1.8
SOF1YLL011W RPL10P41805 221 aaKnown RBP3.82□□□□□ -1.8
SOF1YLL011W YNL320WP42840 284 aa3.82□□□□□ -1.8
SOF1YLL011W PMT4P46971 762 aa3.82□□□□□ -1.8
SOF1YLL011W CDH1P53197 566 aa3.82□□□□□ -1.8
SOF1YLL011W SWC4P53201 476 aa3.82□□□□□ -1.8
SOF1YLL011W SEC13Q04491 297 aaKnown RBP3.82□□□□□ -1.8
SOF1YLL011W GIM5Q04493 163 aa3.82□□□□□ -1.8
SOF1YLL011W FUS2Q05670 677 aa3.82□□□□□ -1.8
SOF1YLL011W CDC123Q05791 360 aa3.82□□□□□ -1.8
SOF1YLL011W CTR3Q06686 241 aa3.82□□□□□ -1.8
SOF1YLL011W UTP23Q12339 254 aaKnown RBP3.82□□□□□ -1.8
SOF1YLL011W RPN6Q12377 434 aa3.82□□□□□ -1.8
SOF1YLL011W ADE1P27616 306 aa3.81□□□□□ -1.8
SOF1YLL011W AGA1P32323 725 aa3.81□□□□□ -1.8
SOF1YLL011W URA8P38627 578 aaPredicted RBP3.81□□□□□ -1.8
SOF1YLL011W ALG8P40351 577 aa3.81□□□□□ -1.8
SOF1YLL011W JHD2P47156 728 aaPredicted RBP3.81□□□□□ -1.8
SOF1YLL011W MRM2P53123 320 aa3.81□□□□□ -1.8
SOF1YLL011W MTM1P53320 366 aa3.81□□□□□ -1.8
SOF1YLL011W ERG13P54839 491 aaKnown RBP3.81□□□□□ -1.8
SOF1YLL011W YDR222WQ04925 415 aa3.81□□□□□ -1.8
SOF1YLL011W YLR012CQ07927 99 aa3.81□□□□□ -1.8
SOF1YLL011W RDL2Q08742 149 aaKnown RBP3.81□□□□□ -1.8
SOF1YLL011W SRO7Q12038 1033 aa3.81□□□□□ -1.8
SOF1YLL011W ATX2Q12067 313 aa3.81□□□□□ -1.8
SOF1YLL011W HTB1P02293 131 aaKnown RBP3.8□□□□□ -1.8
SOF1YLL011W HTB2P02294 131 aa3.8□□□□□ -1.8
SOF1YLL011W REP1P03871 373 aa3.8□□□□□ -1.8
SOF1YLL011W TFS1P14306 219 aa3.8□□□□□ -1.8
SOF1YLL011W SPS19P32573 292 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 126.1 ms