RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C PHO80P20052 293 aa8.86□□□□□ -0.99
YSR3YKR053C STE50P25344 346 aa8.86□□□□□ -0.99
YSR3YKR053C NAB2P32505 525 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
YSR3YKR053C PEP12P32854 288 aa8.86□□□□□ -0.99
YSR3YKR053C YER084WP40057 128 aa8.86□□□□□ -0.99
YSR3YKR053C YTA6P40328 754 aa8.86□□□□□ -0.99
YSR3YKR053C IRC5P43610 853 aa8.86□□□□□ -0.99
YSR3YKR053C SIP18P50263 79 aa8.86□□□□□ -0.99
YSR3YKR053C COS10P52924 374 aa8.86□□□□□ -0.99
YSR3YKR053C YDL114WQ07530 308 aa8.86□□□□□ -0.99
YSR3YKR053C RPL35AP0CX84 120 aaKnown RBP8.85□□□□□ -0.99
YSR3YKR053C RPL35BP0CX85 120 aaKnown RBP8.85□□□□□ -0.99
YSR3YKR053C FAR1P21268 830 aa8.85□□□□□ -0.99
YSR3YKR053C VPH2P32341 215 aa8.85□□□□□ -0.99
YSR3YKR053C MRPS5P33759 307 aa8.85□□□□□ -0.99
YSR3YKR053C YBR096WP38256 230 aa8.85□□□□□ -0.99
YSR3YKR053C YBR220CP38318 560 aa8.85□□□□□ -0.99
YSR3YKR053C YRB2P40517 327 aa8.85□□□□□ -0.99
YSR3YKR053C HIS6P40545 261 aa8.85□□□□□ -0.99
YSR3YKR053C HOT1Q03213 719 aa8.85□□□□□ -0.99
YSR3YKR053C PML1Q07930 204 aaPredicted RBP8.85□□□□□ -0.99
YSR3YKR053C YPL119C-AQ3E751 87 aa8.85□□□□□ -0.99
YSR3YKR053C MSW1P04803 379 aa8.84□□□□□ -0.99
YSR3YKR053C NFT1P0CE68 1218 aa8.84□□□□□ -0.99
YSR3YKR053C SAM35P14693 329 aa8.84□□□□□ -0.99
YSR3YKR053C PDA1P16387 420 aaKnown RBP8.84□□□□□ -0.99
YSR3YKR053C OAC1P32332 324 aa8.84□□□□□ -0.99
YSR3YKR053C YME2P32843 850 aa8.84□□□□□ -0.99
YSR3YKR053C YBR138CP38277 524 aa8.84□□□□□ -0.99
YSR3YKR053C SWP82P43554 623 aa8.84□□□□□ -0.99
YSR3YKR053C VMA10P48836 114 aaKnown RBP8.84□□□□□ -0.99
YSR3YKR053C PGA1P53896 198 aa8.84□□□□□ -0.99
YSR3YKR053C YDR387CQ04162 555 aa8.84□□□□□ -0.99
YSR3YKR053C MEU1Q07938 337 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
YSR3YKR053C IZH2Q12442 317 aa8.84□□□□□ -0.99
YSR3YKR053C YBL029C-AQ3E756 94 aa8.84□□□□□ -0.99
YSR3YKR053C SED4P25365 1065 aa8.83□□□□□ -1
YSR3YKR053C SLZ1P40167 298 aa8.83□□□□□ -1
YSR3YKR053C GAT2P40209 560 aa8.83□□□□□ -1
YSR3YKR053C NQM1P53228 333 aaPredicted RBP8.83□□□□□ -1
YSR3YKR053C MAL12P53341 584 aa8.83□□□□□ -1
YSR3YKR053C YMD8Q03697 442 aa8.83□□□□□ -1
YSR3YKR053C RRP9Q06506 573 aaKnown RBP8.83□□□□□ -1
YSR3YKR053C TAZ1Q06510 381 aa8.83□□□□□ -1
YSR3YKR053C IPK1Q06667 281 aa8.83□□□□□ -1
YSR3YKR053C YPR097WQ06839 1073 aa8.83□□□□□ -1
YSR3YKR053C MCH4Q08268 501 aa8.83□□□□□ -1
YSR3YKR053C ACF2Q12168 779 aa8.83□□□□□ -1
YSR3YKR053C OPI3P05375 206 aa8.82□□□□□ -1
YSR3YKR053C CLB2P24869 491 aa8.82□□□□□ -1
YSR3YKR053C YCL002CP25565 263 aa8.82□□□□□ -1
YSR3YKR053C RSM22P36056 628 aa8.82□□□□□ -1
YSR3YKR053C YBR063CP38083 404 aa8.82□□□□□ -1
YSR3YKR053C PHO90P39535 881 aa8.82□□□□□ -1
YSR3YKR053C SFH5P47008 294 aa8.82□□□□□ -1
YSR3YKR053C TNA1P53322 534 aa8.82□□□□□ -1
YSR3YKR053C YMR099CQ03161 297 aaKnown RBP8.82□□□□□ -1
YSR3YKR053C YLR040CQ07988 224 aa8.82□□□□□ -1
YSR3YKR053C YKL187CP34231 750 aa8.81□□□□□ -1
YSR3YKR053C SRP102P36057 244 aaPredicted RBP8.81□□□□□ -1
YSR3YKR053C INN1P53901 409 aa8.81□□□□□ -1
YSR3YKR053C DMA2P53924 522 aa8.81□□□□□ -1
YSR3YKR053C TIM10P87108 93 aa8.81□□□□□ -1
YSR3YKR053C LAP3Q01532 483 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
YSR3YKR053C NUP49Q02199 472 aa8.81□□□□□ -1
YSR3YKR053C SYC1Q08553 188 aaPredicted RBP8.81□□□□□ -1
YSR3YKR053C FIT3Q08907 204 aa8.81□□□□□ -1
YSR3YKR053C WSC3Q12215 556 aa8.81□□□□□ -1
YSR3YKR053C RRI1Q12468 440 aa8.81□□□□□ -1
YSR3YKR053C YGR161W-CQ3E744 92 aa8.81□□□□□ -1
YSR3YKR053C LSO1Q3E827 93 aa8.81□□□□□ -1
YSR3YKR053C SCEIP03882 235 aa8.8□□□□□ -1
YSR3YKR053C CPR2P23285 205 aa8.8□□□□□ -1
YSR3YKR053C ECM1P39715 212 aa8.8□□□□□ -1
YSR3YKR053C QDR1P40475 563 aa8.8□□□□□ -1
YSR3YKR053C QRI1P43123 477 aaKnown RBP8.8□□□□□ -1
YSR3YKR053C MNT4P53745 580 aa8.8□□□□□ -1
YSR3YKR053C SNZ1Q03148 297 aa8.8□□□□□ -1
YSR3YKR053C YLR345WQ06137 509 aa8.8□□□□□ -1
YSR3YKR053C YOR097CQ12274 175 aaPredicted RBP8.8□□□□□ -1
YSR3YKR053C MCT1Q12283 360 aa8.8□□□□□ -1
YSR3YKR053C PCL9Q12477 304 aa8.8□□□□□ -1
YSR3YKR053C ERG4P25340 473 aa8.79□□□□□ -1
YSR3YKR053C DBF20P32328 564 aa8.79□□□□□ -1
YSR3YKR053C PIG2P40187 538 aa8.79□□□□□ -1
YSR3YKR053C GDS1P41913 522 aa8.79□□□□□ -1
YSR3YKR053C PFS2P42841 465 aaKnown RBP8.79□□□□□ -1
YSR3YKR053C RET2P43621 546 aa8.79□□□□□ -1
YSR3YKR053C MTM1P53320 366 aa8.79□□□□□ -1
YSR3YKR053C NNT1Q05874 261 aa8.79□□□□□ -1
YSR3YKR053C RTN2Q12443 393 aa8.79□□□□□ -1
YSR3YKR053C KRR1P25586 316 aaPredicted RBP8.78□□□□□ -1
YSR3YKR053C FUN19P28003 413 aaPredicted RBP8.78□□□□□ -1
YSR3YKR053C PRP21P32524 280 aaPredicted RBP8.78□□□□□ -1
YSR3YKR053C SSE2P32590 693 aaKnown RBP8.78□□□□□ -1
YSR3YKR053C CLB6P32943 380 aa8.78□□□□□ -1
YSR3YKR053C YBR285WP38354 144 aa8.78□□□□□ -1
YSR3YKR053C BUD17P53727 317 aa8.78□□□□□ -1
YSR3YKR053C RSM28Q03430 361 aa8.78□□□□□ -1
YSR3YKR053C AIM36Q03798 255 aa8.78□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms