RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C ANR2P36090 516 aaPredicted RBP1.76□□□□□ -2.13
VPS35YJL154C SDS24P38314 527 aa1.76□□□□□ -2.13
VPS35YJL154C YMR262WP38430 313 aa1.76□□□□□ -2.13
VPS35YJL154C LIN1P38852 340 aaPredicted RBP1.76□□□□□ -2.13
VPS35YJL154C PEX22P39718 180 aa1.76□□□□□ -2.13
VPS35YJL154C MOB2P43563 287 aa1.76□□□□□ -2.13
VPS35YJL154C CIN2P46670 268 aa1.76□□□□□ -2.13
VPS35YJL154C CTK3P46963 296 aaPredicted RBP1.76□□□□□ -2.13
VPS35YJL154C SSQ1Q05931 657 aaPredicted RBP1.76□□□□□ -2.13
VPS35YJL154C NUP192P47054 1683 aa1.76□□□□□ -2.13
VPS35YJL154C FKS3Q04952 1785 aa1.75□□□□□ -2.13
VPS35YJL154C VPS63O13549 108 aa1.75□□□□□ -2.13
VPS35YJL154C CBP2P03874 630 aaPredicted RBP1.75□□□□□ -2.13
VPS35YJL154C ARG80P07249 177 aa1.75□□□□□ -2.13
VPS35YJL154C CTA1P15202 515 aa1.75□□□□□ -2.13
VPS35YJL154C URA10P30402 227 aa1.75□□□□□ -2.13
VPS35YJL154C MEI5P32489 222 aa1.75□□□□□ -2.13
VPS35YJL154C YOX1P34161 385 aa1.75□□□□□ -2.13
VPS35YJL154C MAK5P38112 773 aaPredicted RBP1.75□□□□□ -2.13
VPS35YJL154C IST2P38250 946 aa1.75□□□□□ -2.13
VPS35YJL154C YFL040WP43562 540 aa1.75□□□□□ -2.13
VPS35YJL154C AIM23P47015 356 aa1.75□□□□□ -2.13
VPS35YJL154C LIA1P47120 325 aaKnown RBP1.75□□□□□ -2.13
VPS35YJL154C NRM1P53718 249 aa1.75□□□□□ -2.13
VPS35YJL154C PRP38Q00723 242 aaPredicted RBP1.75□□□□□ -2.13
VPS35YJL154C EGD1Q02642 157 aaKnown RBP1.75□□□□□ -2.13
VPS35YJL154C MRPS17Q03246 237 aaPredicted RBP1.75□□□□□ -2.13
VPS35YJL154C CAB5Q03941 241 aa1.75□□□□□ -2.13
VPS35YJL154C CSM3Q04659 317 aa1.75□□□□□ -2.13
VPS35YJL154C MHR1Q06630 226 aa1.75□□□□□ -2.13
VPS35YJL154C BRX1Q08235 291 aaKnown RBP1.75□□□□□ -2.13
VPS35YJL154C DDC1Q08949 612 aa1.75□□□□□ -2.13
VPS35YJL154C SAM4Q08985 325 aaKnown RBP1.75□□□□□ -2.13
VPS35YJL154C RPL21BQ12672 160 aaKnown RBP1.75□□□□□ -2.13
VPS35YJL154C TDH1P00360 332 aaKnown RBP1.75□□□□□ -2.13
VPS35YJL154C PRB1P09232 635 aa1.75□□□□□ -2.13
VPS35YJL154C FAR1P21268 830 aa1.75□□□□□ -2.13
VPS35YJL154C MIR1P23641 311 aaKnown RBP1.75□□□□□ -2.13
VPS35YJL154C ERG9P29704 444 aa1.75□□□□□ -2.13
VPS35YJL154C HXT1P32465 570 aa1.75□□□□□ -2.13
VPS35YJL154C MKK1P32490 508 aa1.75□□□□□ -2.13
VPS35YJL154C ZUO1P32527 433 aaKnown RBP1.75□□□□□ -2.13
VPS35YJL154C SWC5P38326 303 aa1.75□□□□□ -2.13
VPS35YJL154C TAF6P53040 516 aa1.75□□□□□ -2.13
VPS35YJL154C CGR1P53188 120 aa1.75□□□□□ -2.13
VPS35YJL154C BOP2Q06150 570 aa1.75□□□□□ -2.13
VPS35YJL154C ATP16Q12165 160 aa1.75□□□□□ -2.13
VPS35YJL154C SFM1Q12314 213 aa1.75□□□□□ -2.13
VPS35YJL154C COX4P04037 155 aa1.74□□□□□ -2.13
VPS35YJL154C GAL7P08431 366 aa1.74□□□□□ -2.13
VPS35YJL154C RPL18AP0CX49 186 aaKnown RBP1.74□□□□□ -2.13
VPS35YJL154C RPL18BP0CX50 186 aaKnown RBP1.74□□□□□ -2.13
VPS35YJL154C UTR1P21373 530 aa1.74□□□□□ -2.13
VPS35YJL154C ACB1P31787 87 aa1.74□□□□□ -2.13
VPS35YJL154C YPS1P32329 569 aa1.74□□□□□ -2.13
VPS35YJL154C UTH1P36135 365 aa1.74□□□□□ -2.13
VPS35YJL154C SIP3P38717 1229 aa1.74□□□□□ -2.13
VPS35YJL154C UTP25P40498 721 aaKnown RBP1.74□□□□□ -2.13
VPS35YJL154C NAS6P50086 228 aa1.74□□□□□ -2.13
VPS35YJL154C YGR067CP53243 804 aa1.74□□□□□ -2.13
VPS35YJL154C VOA1P53262 265 aa1.74□□□□□ -2.13
VPS35YJL154C PXR1P53335 271 aaPredicted RBP1.74□□□□□ -2.13
VPS35YJL154C ABZ2Q03266 374 aa1.74□□□□□ -2.13
VPS35YJL154C YHC1Q05900 231 aaKnown RBP1.74□□□□□ -2.13
VPS35YJL154C YLR177WQ06251 628 aa1.74□□□□□ -2.13
VPS35YJL154C UNG1P12887 359 aa1.74□□□□□ -2.13
VPS35YJL154C CKA2P19454 339 aa1.74□□□□□ -2.13
VPS35YJL154C SAR1P20606 190 aaKnown RBP1.74□□□□□ -2.13
VPS35YJL154C YRB2P40517 327 aa1.74□□□□□ -2.13
VPS35YJL154C STB1P42845 420 aa1.74□□□□□ -2.13
VPS35YJL154C BIO3P50277 480 aa1.74□□□□□ -2.13
VPS35YJL154C ADD37Q03233 198 aa1.74□□□□□ -2.13
VPS35YJL154C TRM82Q03774 444 aa1.74□□□□□ -2.13
VPS35YJL154C SRO7Q12038 1033 aa1.74□□□□□ -2.13
VPS35YJL154C LAG2Q92325 660 aa1.74□□□□□ -2.13
VPS35YJL154C FIG2P25653 1609 aa1.74□□□□□ -2.13
VPS35YJL154C APC1P53886 1748 aa1.73□□□□□ -2.13
VPS35YJL154C RPS14AP06367 137 aaKnown RBP1.73□□□□□ -2.13
VPS35YJL154C RAD1P06777 1100 aa1.73□□□□□ -2.13
VPS35YJL154C RAD7P06779 565 aa1.73□□□□□ -2.13
VPS35YJL154C FUS3P16892 353 aaKnown RBP1.73□□□□□ -2.13
VPS35YJL154C TPO5P36029 618 aa1.73□□□□□ -2.13
VPS35YJL154C SMF2P38778 549 aa1.73□□□□□ -2.13
VPS35YJL154C RPS14BP39516 138 aaKnown RBP1.73□□□□□ -2.13
VPS35YJL154C MSS2P40990 351 aa1.73□□□□□ -2.13
VPS35YJL154C HSH155P49955 971 aaKnown RBP1.73□□□□□ -2.13
VPS35YJL154C YGL262WP53054 175 aa1.73□□□□□ -2.13
VPS35YJL154C VEL1P53058 206 aa1.73□□□□□ -2.13
VPS35YJL154C LSG1P53145 640 aaKnown RBP1.73□□□□□ -2.13
VPS35YJL154C YLR152CP54072 576 aa1.73□□□□□ -2.13
VPS35YJL154C MRPS16Q02608 121 aa1.73□□□□□ -2.13
VPS35YJL154C CDC36P06100 191 aaPredicted RBP1.73□□□□□ -2.13
VPS35YJL154C EPT1P22140 391 aa1.73□□□□□ -2.13
VPS35YJL154C DCC1P25559 380 aa1.73□□□□□ -2.13
VPS35YJL154C COT1P32798 439 aa1.73□□□□□ -2.13
VPS35YJL154C KTI12P34253 313 aaKnown RBP1.73□□□□□ -2.13
VPS35YJL154C MNN9P39107 395 aaKnown RBP1.73□□□□□ -2.13
VPS35YJL154C CDH1P53197 566 aa1.73□□□□□ -2.13
VPS35YJL154C BCP1Q06338 283 aa1.73□□□□□ -2.13
VPS35YJL154C YLR413WQ06689 675 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms