RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W ATG31Q12421 196 aa1.85□□□□□ -2.11
RTT107YHR154W SNF8Q12483 233 aa1.85□□□□□ -2.11
RTT107YHR154W IZH4Q99393 312 aa1.85□□□□□ -2.11
RTT107YHR154W MEC1P38111 2368 aa1.84□□□□□ -2.11
RTT107YHR154W IPP1P00817 287 aaKnown RBP1.84□□□□□ -2.11
RTT107YHR154W PAB1P04147 577 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
RTT107YHR154W YBR121C-AP0C5L4 52 aa1.84□□□□□ -2.11
RTT107YHR154W SPS100P13130 326 aa1.84□□□□□ -2.11
RTT107YHR154W ERD1P16151 362 aa1.84□□□□□ -2.11
RTT107YHR154W UTR1P21373 530 aa1.84□□□□□ -2.11
RTT107YHR154W MRPL8P22353 238 aa1.84□□□□□ -2.11
RTT107YHR154W CPR5P35176 225 aa1.84□□□□□ -2.11
RTT107YHR154W FRE2P36033 711 aa1.84□□□□□ -2.11
RTT107YHR154W AIM29P36154 155 aa1.84□□□□□ -2.11
RTT107YHR154W RRP3P38712 501 aaKnown RBP1.84□□□□□ -2.11
RTT107YHR154W YHK8P38776 514 aa1.84□□□□□ -2.11
RTT107YHR154W SMF2P38778 549 aa1.84□□□□□ -2.11
RTT107YHR154W YHR122WP38829 231 aa1.84□□□□□ -2.11
RTT107YHR154W YNL320WP42840 284 aa1.84□□□□□ -2.11
RTT107YHR154W LSG1P53145 640 aaKnown RBP1.84□□□□□ -2.11
RTT107YHR154W CAF40P53829 373 aa1.84□□□□□ -2.11
RTT107YHR154W ASI1P54074 624 aa1.84□□□□□ -2.11
RTT107YHR154W THI7Q05998 598 aa1.84□□□□□ -2.11
RTT107YHR154W SNT309Q06091 175 aaPredicted RBP1.84□□□□□ -2.11
RTT107YHR154W SDO1Q07953 250 aaKnown RBP1.84□□□□□ -2.11
RTT107YHR154W IES4Q08561 116 aa1.84□□□□□ -2.11
RTT107YHR154W POL2P21951 2222 aaKnown RBP1.84□□□□□ -2.11
RTT107YHR154W SUC2P00724 532 aa1.84□□□□□ -2.12
RTT107YHR154W YMR31P19955 123 aa1.84□□□□□ -2.12
RTT107YHR154W RRT12P25381 491 aa1.84□□□□□ -2.12
RTT107YHR154W YCR100CP25606 316 aa1.84□□□□□ -2.12
RTT107YHR154W BUB3P26449 341 aa1.84□□□□□ -2.12
RTT107YHR154W PRS4P38063 326 aaPredicted RBP1.84□□□□□ -2.12
RTT107YHR154W POP7P38291 140 aa1.84□□□□□ -2.12
RTT107YHR154W HEM14P40012 539 aa1.84□□□□□ -2.12
RTT107YHR154W SHO1P40073 367 aa1.84□□□□□ -2.12
RTT107YHR154W YJR012CP47087 207 aa1.84□□□□□ -2.12
RTT107YHR154W COQ5P49017 307 aa1.84□□□□□ -2.12
RTT107YHR154W NBP1P52919 319 aaPredicted RBP1.84□□□□□ -2.12
RTT107YHR154W RPM2Q02773 1202 aa1.84□□□□□ -2.12
RTT107YHR154W KRE28Q04431 385 aa1.84□□□□□ -2.12
RTT107YHR154W RPN8Q08723 338 aaKnown RBP1.84□□□□□ -2.12
RTT107YHR154W ORT1Q12375 292 aa1.84□□□□□ -2.12
RTT107YHR154W YOP1Q12402 180 aa1.84□□□□□ -2.12
RTT107YHR154W TEF1P02994 458 aaKnown RBP1.83□□□□□ -2.12
RTT107YHR154W RPL20AP0CX23 172 aaKnown RBP1.83□□□□□ -2.12
RTT107YHR154W RPL20BP0CX24 172 aaPredicted RBP1.83□□□□□ -2.12
RTT107YHR154W FRS2P15625 503 aaKnown RBP1.83□□□□□ -2.12
RTT107YHR154W SNF6P18888 332 aa1.83□□□□□ -2.12
RTT107YHR154W VMA6P32366 345 aaKnown RBP1.83□□□□□ -2.12
RTT107YHR154W SPS19P32573 292 aaKnown RBP1.83□□□□□ -2.12
RTT107YHR154W ATO2P32907 282 aa1.83□□□□□ -2.12
RTT107YHR154W MRPL10P36520 322 aa1.83□□□□□ -2.12
RTT107YHR154W SHE3P38272 425 aaKnown RBP1.83□□□□□ -2.12
RTT107YHR154W YAL037WP39728 267 aa1.83□□□□□ -2.12
RTT107YHR154W FAU1P40099 211 aa1.83□□□□□ -2.12
RTT107YHR154W YPT32P51996 222 aaKnown RBP1.83□□□□□ -2.12
RTT107YHR154W TIM44Q01852 431 aa1.83□□□□□ -2.12
RTT107YHR154W CCE1Q03702 353 aa1.83□□□□□ -2.12
RTT107YHR154W SWF1Q04629 336 aa1.83□□□□□ -2.12
RTT107YHR154W CSM3Q04659 317 aa1.83□□□□□ -2.12
RTT107YHR154W APC9Q12107 265 aa1.83□□□□□ -2.12
RTT107YHR154W HRT3Q12347 344 aa1.83□□□□□ -2.12
RTT107YHR154W URE2P23202 354 aaKnown RBP1.83□□□□□ -2.12
RTT107YHR154W CLB2P24869 491 aa1.83□□□□□ -2.12
RTT107YHR154W VPS51P36116 164 aa1.83□□□□□ -2.12
RTT107YHR154W SRP14P38985 146 aa1.83□□□□□ -2.12
RTT107YHR154W GAA1P39012 614 aa1.83□□□□□ -2.12
RTT107YHR154W EXO1P39875 702 aa1.83□□□□□ -2.12
RTT107YHR154W ERG10P41338 398 aaKnown RBP1.83□□□□□ -2.12
RTT107YHR154W MRM2P53123 320 aa1.83□□□□□ -2.12
RTT107YHR154W SSU72P53538 206 aaPredicted RBP1.83□□□□□ -2.12
RTT107YHR154W COX2P00410 251 aa1.83□□□□□ -2.12
RTT107YHR154W RAD1P06777 1100 aa1.83□□□□□ -2.12
RTT107YHR154W PMA2P19657 947 aa1.83□□□□□ -2.12
RTT107YHR154W SLY1P22213 666 aa1.83□□□□□ -2.12
RTT107YHR154W CTS1P29029 562 aa1.83□□□□□ -2.12
RTT107YHR154W PHD1P36093 366 aa1.83□□□□□ -2.12
RTT107YHR154W ERG28P40030 148 aa1.83□□□□□ -2.12
RTT107YHR154W TDA10P42938 290 aa1.83□□□□□ -2.12
RTT107YHR154W LST7P53237 242 aa1.83□□□□□ -2.12
RTT107YHR154W IBD2P53892 351 aa1.83□□□□□ -2.12
RTT107YHR154W ASI3P53983 676 aa1.83□□□□□ -2.12
RTT107YHR154W BCH1Q05029 724 aa1.83□□□□□ -2.12
RTT107YHR154W BNA5Q05979 453 aa1.83□□□□□ -2.12
RTT107YHR154W LOT6Q07923 191 aa1.83□□□□□ -2.12
RTT107YHR154W PLB3Q08108 686 aa1.83□□□□□ -2.12
RTT107YHR154W SKI7Q08491 747 aaPredicted RBP1.83□□□□□ -2.12
RTT107YHR154W AKR2Q12013 749 aa1.83□□□□□ -2.12
RTT107YHR154W YOR097CQ12274 175 aaPredicted RBP1.83□□□□□ -2.12
RTT107YHR154W CSF1Q12150 2958 aa1.82□□□□□ -2.12
RTT107YHR154W DPB2P24482 689 aaPredicted RBP1.82□□□□□ -2.12
RTT107YHR154W RNA15P25299 296 aaPredicted RBP1.82□□□□□ -2.12
RTT107YHR154W LSB5P25369 354 aa1.82□□□□□ -2.12
RTT107YHR154W NAM9P27929 486 aa1.82□□□□□ -2.12
RTT107YHR154W ACB1P31787 87 aa1.82□□□□□ -2.12
RTT107YHR154W TKL2P33315 681 aa1.82□□□□□ -2.12
RTT107YHR154W ARN1P38731 627 aa1.82□□□□□ -2.12
RTT107YHR154W CDC40P40968 455 aaPredicted RBP1.82□□□□□ -2.12
RTT107YHR154W BIR1P47134 954 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms