RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W YIL086CP40503 102 aa7.48□□□□□ -1.21
GGA2YHR108W SSY1Q03770 852 aa7.48□□□□□ -1.21
GGA2YHR108W COQ10Q08058 207 aa7.48□□□□□ -1.21
GGA2YHR108W ENB1Q08299 606 aa7.48□□□□□ -1.21
GGA2YHR108W BEM2P39960 2167 aaKnown RBP7.48□□□□□ -1.21
GGA2YHR108W RPL1AP0CX43 217 aaKnown RBP7.48□□□□□ -1.21
GGA2YHR108W RPL1BP0CX44 217 aaKnown RBP7.48□□□□□ -1.21
GGA2YHR108W PDA1P16387 420 aaKnown RBP7.48□□□□□ -1.21
GGA2YHR108W SNF5P18480 905 aa7.48□□□□□ -1.21
GGA2YHR108W CFD1P40558 293 aa7.48□□□□□ -1.21
GGA2YHR108W POP1P41812 875 aa7.48□□□□□ -1.21
GGA2YHR108W AIM25P47140 327 aa7.48□□□□□ -1.21
GGA2YHR108W UTP21Q06078 939 aaPredicted RBP7.48□□□□□ -1.21
GGA2YHR108W MRPL51Q06090 140 aaPredicted RBP7.48□□□□□ -1.21
GGA2YHR108W SSK1Q07084 712 aa7.48□□□□□ -1.21
GGA2YHR108W YOL073CQ08232 322 aa7.48□□□□□ -1.21
GGA2YHR108W BSC6Q08280 497 aa7.48□□□□□ -1.21
GGA2YHR108W MCP1Q12106 302 aa7.48□□□□□ -1.21
GGA2YHR108W ADK1P07170 222 aaKnown RBP7.47□□□□□ -1.21
GGA2YHR108W MSN4P33749 630 aa7.47□□□□□ -1.21
GGA2YHR108W TAT1P38085 619 aa7.47□□□□□ -1.21
GGA2YHR108W PEX32P38292 413 aa7.47□□□□□ -1.21
GGA2YHR108W MTC4P38335 694 aaKnown RBP7.47□□□□□ -1.21
GGA2YHR108W FAA3P39002 694 aa7.47□□□□□ -1.21
GGA2YHR108W YIL067CP40514 678 aa7.47□□□□□ -1.21
GGA2YHR108W SHR5P41912 237 aa7.47□□□□□ -1.21
GGA2YHR108W SEH1P53011 349 aaKnown RBP7.47□□□□□ -1.21
GGA2YHR108W YNR014WP53719 212 aa7.47□□□□□ -1.21
GGA2YHR108W MPP6P53725 186 aaPredicted RBP7.47□□□□□ -1.21
GGA2YHR108W SCS7Q03529 384 aa7.47□□□□□ -1.21
GGA2YHR108W EKI1Q03764 534 aa7.47□□□□□ -1.21
GGA2YHR108W YLR283WQ05867 314 aa7.47□□□□□ -1.21
GGA2YHR108W PEX30Q06169 523 aa7.47□□□□□ -1.21
GGA2YHR108W HRT1Q08273 121 aa7.47□□□□□ -1.21
GGA2YHR108W RDR1Q08904 546 aa7.47□□□□□ -1.21
GGA2YHR108W REX3Q12090 404 aa7.47□□□□□ -1.21
GGA2YHR108W BBP1Q12365 385 aa7.47□□□□□ -1.21
GGA2YHR108W SET6Q12529 373 aa7.47□□□□□ -1.21
GGA2YHR108W YMR084WA2P2R3 262 aa7.46□□□□□ -1.21
GGA2YHR108W HOP09932 586 aa7.46□□□□□ -1.21
GGA2YHR108W DAT1P13483 248 aaKnown RBP7.46□□□□□ -1.21
GGA2YHR108W GAS1P22146 559 aaKnown RBP7.46□□□□□ -1.21
GGA2YHR108W YJL193WP39542 402 aa7.46□□□□□ -1.21
GGA2YHR108W YER184CP39961 794 aa7.46□□□□□ -1.21
GGA2YHR108W YJR120WP47157 116 aa7.46□□□□□ -1.21
GGA2YHR108W CCC1P47818 322 aa7.46□□□□□ -1.21
GGA2YHR108W YGL204CP53089 101 aa7.46□□□□□ -1.21
GGA2YHR108W MPA43P53583 542 aaPredicted RBP7.46□□□□□ -1.21
GGA2YHR108W RPL6AQ02326 176 aaKnown RBP7.46□□□□□ -1.21
GGA2YHR108W MRPL1Q04599 285 aa7.46□□□□□ -1.21
GGA2YHR108W RLM1Q12224 676 aa7.46□□□□□ -1.21
GGA2YHR108W RTR2Q12378 196 aa7.46□□□□□ -1.21
GGA2YHR108W SKM1Q12469 655 aa7.46□□□□□ -1.21
GGA2YHR108W CDC23P16522 626 aa7.46□□□□□ -1.22
GGA2YHR108W NCP1P16603 691 aaKnown RBP7.46□□□□□ -1.22
GGA2YHR108W ATS1P31386 333 aa7.46□□□□□ -1.22
GGA2YHR108W YHR122WP38829 231 aa7.46□□□□□ -1.22
GGA2YHR108W YHR180WP38868 163 aa7.46□□□□□ -1.22
GGA2YHR108W GPG1P53130 126 aa7.46□□□□□ -1.22
GGA2YHR108W TPP1Q03796 238 aa7.46□□□□□ -1.22
GGA2YHR108W YNG1Q08465 219 aa7.46□□□□□ -1.22
GGA2YHR108W BTS1Q12051 335 aa7.46□□□□□ -1.22
GGA2YHR108W INP53Q12271 1107 aa7.46□□□□□ -1.22
GGA2YHR108W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
GGA2YHR108W RNA14P25298 677 aaKnown RBP7.45□□□□□ -1.22
GGA2YHR108W STP22P25604 385 aa7.45□□□□□ -1.22
GGA2YHR108W ERG24P32462 438 aaKnown RBP7.45□□□□□ -1.22
GGA2YHR108W PAD1P33751 242 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
GGA2YHR108W TAF14P35189 244 aa7.45□□□□□ -1.22
GGA2YHR108W RFC4P40339 323 aaKnown RBP7.45□□□□□ -1.22
GGA2YHR108W CAT5P41735 233 aa7.45□□□□□ -1.22
GGA2YHR108W YJR115WP47152 169 aa7.45□□□□□ -1.22
GGA2YHR108W RHO5P53879 331 aaKnown RBP7.45□□□□□ -1.22
GGA2YHR108W YMR210WQ03649 449 aa7.45□□□□□ -1.22
GGA2YHR108W PAL1Q05518 499 aaKnown RBP7.45□□□□□ -1.22
GGA2YHR108W DCR2Q05924 578 aa7.45□□□□□ -1.22
GGA2YHR108W KEI1Q06346 221 aa7.45□□□□□ -1.22
GGA2YHR108W GCD1P09032 578 aaPredicted RBP7.44□□□□□ -1.22
GGA2YHR108W GLK1P17709 500 aaKnown RBP7.44□□□□□ -1.22
GGA2YHR108W YCR006CP25350 157 aa7.44□□□□□ -1.22
GGA2YHR108W CWH43P25618 953 aa7.44□□□□□ -1.22
GGA2YHR108W SDS24P38314 527 aa7.44□□□□□ -1.22
GGA2YHR108W NAS2P40555 220 aa7.44□□□□□ -1.22
GGA2YHR108W SLS1P42900 643 aa7.44□□□□□ -1.22
GGA2YHR108W MTL1P53214 551 aa7.44□□□□□ -1.22
GGA2YHR108W YGR266WP53326 701 aa7.44□□□□□ -1.22
GGA2YHR108W NMA1Q06178 401 aaKnown RBP7.44□□□□□ -1.22
GGA2YHR108W PRP46Q12417 451 aaPredicted RBP7.44□□□□□ -1.22
GGA2YHR108W RDI1Q12434 202 aa7.44□□□□□ -1.22
GGA2YHR108W YBR298C-AQ8TGK4 73 aa7.44□□□□□ -1.22
GGA2YHR108W ARF1P11076 181 aaKnown RBP7.43□□□□□ -1.22
GGA2YHR108W NHP6BP11633 99 aaKnown RBP7.43□□□□□ -1.22
GGA2YHR108W STE50P25344 346 aa7.43□□□□□ -1.22
GGA2YHR108W CNE1P27825 502 aa7.43□□□□□ -1.22
GGA2YHR108W FAA1P30624 700 aaKnown RBP7.43□□□□□ -1.22
GGA2YHR108W SPT10P35208 640 aa7.43□□□□□ -1.22
GGA2YHR108W SMB1P40018 196 aaKnown RBP7.43□□□□□ -1.22
GGA2YHR108W YER137CP40083 148 aaKnown RBP7.43□□□□□ -1.22
GGA2YHR108W SNX4P47057 423 aa7.43□□□□□ -1.22
GGA2YHR108W UTP15Q04305 513 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms