RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W COX14P39103 70 aa1.91□□□□□ -2.1
NIC96YFR002W YER186CP40101 306 aa1.91□□□□□ -2.1
NIC96YFR002W SLM1P40485 686 aa1.91□□□□□ -2.1
NIC96YFR002W YAR1P46683 200 aa1.91□□□□□ -2.1
NIC96YFR002W YJL118WP47022 219 aa1.91□□□□□ -2.1
NIC96YFR002W BIR1P47134 954 aa1.91□□□□□ -2.1
NIC96YFR002W PET117Q02771 107 aa1.91□□□□□ -2.1
NIC96YFR002W BCP1Q06338 283 aa1.91□□□□□ -2.1
NIC96YFR002W CTS2Q06350 511 aa1.91□□□□□ -2.1
NIC96YFR002W MDM36Q06820 579 aa1.91□□□□□ -2.1
NIC96YFR002W GAT3Q07928 141 aa1.91□□□□□ -2.1
NIC96YFR002W YGK3Q12222 375 aaPredicted RBP1.91□□□□□ -2.1
NIC96YFR002W NCA2Q12374 616 aa1.91□□□□□ -2.1
NIC96YFR002W MYO1P08964 1928 aa1.91□□□□□ -2.1
NIC96YFR002W COX2P00410 251 aa1.9□□□□□ -2.1
NIC96YFR002W RPL24AP04449 155 aaKnown RBP1.9□□□□□ -2.1
NIC96YFR002W RPL5P26321 297 aaKnown RBP1.9□□□□□ -2.1
NIC96YFR002W CWP1P28319 239 aa1.9□□□□□ -2.1
NIC96YFR002W COS9P36034 407 aa1.9□□□□□ -2.1
NIC96YFR002W SEO1P39709 593 aa1.9□□□□□ -2.1
NIC96YFR002W OXA1P39952 402 aa1.9□□□□□ -2.1
NIC96YFR002W EGT2P42835 1041 aa1.9□□□□□ -2.1
NIC96YFR002W YCH1P42937 148 aa1.9□□□□□ -2.1
NIC96YFR002W PGU1P47180 361 aa1.9□□□□□ -2.1
NIC96YFR002W BIO4P53630 237 aa1.9□□□□□ -2.1
NIC96YFR002W YPR172WQ06608 200 aa1.9□□□□□ -2.1
NIC96YFR002W NDE2Q07500 545 aa1.9□□□□□ -2.1
NIC96YFR002W YOL075CQ08234 1294 aa1.9□□□□□ -2.1
NIC96YFR002W YOP1Q12402 180 aa1.9□□□□□ -2.1
NIC96YFR002W YPR1Q12458 312 aa1.9□□□□□ -2.1
NIC96YFR002W RGS2Q99188 309 aa1.9□□□□□ -2.1
NIC96YFR002W DET1Q99288 334 aaKnown RBP1.9□□□□□ -2.1
NIC96YFR002W UBA3Q99344 299 aa1.9□□□□□ -2.1
NIC96YFR002W PAB1P04147 577 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11 RIP-Chip
NIC96YFR002W MRPL25P23369 157 aa1.9□□□□□ -2.11
NIC96YFR002W CSM1P25651 190 aa1.9□□□□□ -2.11
NIC96YFR002W YEF1P32622 495 aa1.9□□□□□ -2.11
NIC96YFR002W PRM9P39551 298 aa1.9□□□□□ -2.11
NIC96YFR002W YER085CP40058 173 aa1.9□□□□□ -2.11
NIC96YFR002W SEC9P40357 651 aa1.9□□□□□ -2.11
NIC96YFR002W SHQ1P40486 507 aaPredicted RBP1.9□□□□□ -2.11
NIC96YFR002W MSS2P40990 351 aa1.9□□□□□ -2.11
NIC96YFR002W ATG18P43601 500 aa1.9□□□□□ -2.11
NIC96YFR002W MST27P53176 234 aa1.9□□□□□ -2.11
NIC96YFR002W LST7P53237 242 aa1.9□□□□□ -2.11
NIC96YFR002W SPP2Q02521 185 aa1.9□□□□□ -2.11
NIC96YFR002W RVB1Q03940 463 aaKnown RBP1.9□□□□□ -2.11
NIC96YFR002W CSM3Q04659 317 aa1.9□□□□□ -2.11
NIC96YFR002W RTN1Q04947 295 aaKnown RBP1.9□□□□□ -2.11
NIC96YFR002W GPN3Q06543 272 aa1.9□□□□□ -2.11
NIC96YFR002W MED4Q12343 284 aa1.9□□□□□ -2.11
NIC96YFR002W GIS3Q12418 502 aa1.9□□□□□ -2.11
NIC96YFR002W ATG31Q12421 196 aa1.9□□□□□ -2.11
NIC96YFR002W CAP2P13517 287 aa1.89□□□□□ -2.11
NIC96YFR002W EXG1P23776 448 aaKnown RBP1.89□□□□□ -2.11
NIC96YFR002W RAD51P25454 400 aa1.89□□□□□ -2.11
NIC96YFR002W SUA5P32579 426 aa1.89□□□□□ -2.11
NIC96YFR002W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
NIC96YFR002W MCR1P36060 302 aaKnown RBP1.89□□□□□ -2.11
NIC96YFR002W DTR1P38125 572 aa1.89□□□□□ -2.11
NIC96YFR002W BNA6P43619 295 aa1.89□□□□□ -2.11
NIC96YFR002W YFR057WP43625 151 aa1.89□□□□□ -2.11
NIC96YFR002W TAF6P53040 516 aa1.89□□□□□ -2.11
NIC96YFR002W CRH1P53301 507 aa1.89□□□□□ -2.11
NIC96YFR002W SPR6Q01684 191 aa1.89□□□□□ -2.11
NIC96YFR002W LIP2Q06005 328 aa1.89□□□□□ -2.11
NIC96YFR002W CMS1Q07897 291 aaKnown RBP1.89□□□□□ -2.11
NIC96YFR002W YOR097CQ12274 175 aaPredicted RBP1.89□□□□□ -2.11
NIC96YFR002W ARF2P19146 181 aaKnown RBP1.89□□□□□ -2.11
NIC96YFR002W PRR1P28708 518 aa1.89□□□□□ -2.11
NIC96YFR002W VMA5P31412 392 aaKnown RBP1.89□□□□□ -2.11
NIC96YFR002W MKK1P32490 508 aa1.89□□□□□ -2.11
NIC96YFR002W ANR2P36090 516 aaPredicted RBP1.89□□□□□ -2.11
NIC96YFR002W YKR015CP36111 568 aa1.89□□□□□ -2.11
NIC96YFR002W YMR262WP38430 313 aa1.89□□□□□ -2.11
NIC96YFR002W YHK8P38776 514 aa1.89□□□□□ -2.11
NIC96YFR002W YFH7P43591 353 aa1.89□□□□□ -2.11
NIC96YFR002W LCB3P47013 409 aa1.89□□□□□ -2.11
NIC96YFR002W OKP1P53298 406 aa1.89□□□□□ -2.11
NIC96YFR002W PXR1P53335 271 aaPredicted RBP1.89□□□□□ -2.11
NIC96YFR002W MKC7P53379 596 aa1.89□□□□□ -2.11
NIC96YFR002W TDA1Q03533 586 aa1.89□□□□□ -2.11
NIC96YFR002W YET2Q04210 160 aa1.89□□□□□ -2.11
NIC96YFR002W ATG38Q05789 226 aaKnown RBP1.89□□□□□ -2.11
NIC96YFR002W APC2Q12440 853 aa1.89□□□□□ -2.11
NIC96YFR002W GCN1P33892 2672 aaKnown RBP1.89□□□□□ -2.11
NIC96YFR002W SAL1D6W196 494 aa1.88□□□□□ -2.11
NIC96YFR002W JIP3O13555 125 aa1.88□□□□□ -2.11
NIC96YFR002W COX4P04037 155 aa1.88□□□□□ -2.11
NIC96YFR002W MRPL8P22353 238 aa1.88□□□□□ -2.11
NIC96YFR002W VPS3P23643 1011 aa1.88□□□□□ -2.11
NIC96YFR002W GCG1P32656 232 aaKnown RBP1.88□□□□□ -2.11
NIC96YFR002W OTU1P43558 301 aa1.88□□□□□ -2.11
NIC96YFR002W MRPS16Q02608 121 aa1.88□□□□□ -2.11
NIC96YFR002W YPL080CQ02826 108 aa1.88□□□□□ -2.11
NIC96YFR002W SHS1Q07657 551 aa1.88□□□□□ -2.11
NIC96YFR002W MFG1Q07684 458 aa1.88□□□□□ -2.11
NIC96YFR002W YOL024WQ08172 172 aa1.88□□□□□ -2.11
NIC96YFR002W ALE1Q08548 619 aa1.88□□□□□ -2.11
NIC96YFR002W SIA1Q12212 622 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms