RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W GPA1P08539 472 aa1.86□□□□□ -2.11
UBP1YDL122W RNR2P09938 399 aaKnown RBP1.86□□□□□ -2.11
UBP1YDL122W PET123P17558 318 aa1.86□□□□□ -2.11
UBP1YDL122W PET18P25362 215 aa1.86□□□□□ -2.11
UBP1YDL122W DOA1P36037 715 aa1.86□□□□□ -2.11
UBP1YDL122W ATP3P38077 311 aaKnown RBP1.86□□□□□ -2.11
UBP1YDL122W TCM62P38228 572 aaKnown RBP1.86□□□□□ -2.11
UBP1YDL122W LIN1P38852 340 aaPredicted RBP1.86□□□□□ -2.11
UBP1YDL122W PEX18P38855 283 aa1.86□□□□□ -2.11
UBP1YDL122W MET30P39014 640 aa1.86□□□□□ -2.11
UBP1YDL122W YER121WP40076 114 aa1.86□□□□□ -2.11
UBP1YDL122W GCD10P41814 478 aa1.86□□□□□ -2.11
UBP1YDL122W TFG2P41896 400 aaPredicted RBP1.86□□□□□ -2.11
UBP1YDL122W SMA2Q04658 369 aa1.86□□□□□ -2.11
UBP1YDL122W YMR317WQ04893 1140 aa1.86□□□□□ -2.11
UBP1YDL122W IPK1Q06667 281 aa1.86□□□□□ -2.11
UBP1YDL122W YLL056CQ12177 298 aa1.86□□□□□ -2.11
UBP1YDL122W MRPL23Q12487 163 aaPredicted RBP1.86□□□□□ -2.11
UBP1YDL122W MRS3P10566 314 aa1.86□□□□□ -2.11
UBP1YDL122W SAG1P20840 650 aa1.86□□□□□ -2.11
UBP1YDL122W CNA1P23287 553 aa1.86□□□□□ -2.11
UBP1YDL122W VMA11P32842 164 aa1.86□□□□□ -2.11
UBP1YDL122W RPC34P32910 317 aa1.86□□□□□ -2.11
UBP1YDL122W VPS51P36116 164 aa1.86□□□□□ -2.11
UBP1YDL122W CBP4P37267 147 aa1.86□□□□□ -2.11
UBP1YDL122W ROT2P38138 954 aa1.86□□□□□ -2.11
UBP1YDL122W BFR1P38934 470 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11 RIP-Chip
UBP1YDL122W PAC11P40960 533 aa1.86□□□□□ -2.11
UBP1YDL122W RPL10P41805 221 aaKnown RBP1.86□□□□□ -2.11
UBP1YDL122W POP1P41812 875 aa1.86□□□□□ -2.11
UBP1YDL122W LYS20P48570 428 aaKnown RBP1.86□□□□□ -2.11
UBP1YDL122W SMM1P53720 384 aaKnown RBP1.86□□□□□ -2.11
UBP1YDL122W SHR3Q02774 210 aa1.86□□□□□ -2.11
UBP1YDL122W VPS60Q03390 229 aa1.86□□□□□ -2.11
UBP1YDL122W GMC1Q04399 608 aa1.86□□□□□ -2.11
UBP1YDL122W ECM18Q04623 453 aa1.86□□□□□ -2.11
UBP1YDL122W RIF2Q06208 395 aa1.86□□□□□ -2.11
UBP1YDL122W RRT8Q08219 342 aa1.86□□□□□ -2.11
UBP1YDL122W MCH4Q08268 501 aa1.86□□□□□ -2.11
UBP1YDL122W YDL180WQ12301 547 aa1.86□□□□□ -2.11
UBP1YDL122W FSH3Q99369 266 aa1.86□□□□□ -2.11
UBP1YDL122W STE2D6VTK4 431 aa1.85□□□□□ -2.11
UBP1YDL122W SSC1P0CS90 654 aaKnown RBP1.85□□□□□ -2.11
UBP1YDL122W PRP21P32524 280 aaPredicted RBP1.85□□□□□ -2.11
UBP1YDL122W MSN2P33748 704 aa1.85□□□□□ -2.11
UBP1YDL122W SOR1P35497 357 aaKnown RBP1.85□□□□□ -2.11
UBP1YDL122W END3P39013 349 aa1.85□□□□□ -2.11
UBP1YDL122W APQ12P40532 138 aa1.85□□□□□ -2.11
UBP1YDL122W BRO1P48582 844 aa1.85□□□□□ -2.11
UBP1YDL122W YNL046WP53956 172 aa1.85□□□□□ -2.11
UBP1YDL122W YDR222WQ04925 415 aa1.85□□□□□ -2.11
UBP1YDL122W PDR8Q06149 701 aa1.85□□□□□ -2.11
UBP1YDL122W SOR2Q07786 357 aa1.85□□□□□ -2.11
UBP1YDL122W RRP40Q08285 240 aaKnown RBP1.85□□□□□ -2.11
UBP1YDL122W SRL1Q08673 210 aa1.85□□□□□ -2.11
UBP1YDL122W RRG7Q08774 242 aaPredicted RBP1.85□□□□□ -2.11
UBP1YDL122W RUP1Q12242 671 aa1.85□□□□□ -2.11
UBP1YDL122W NFT1P0CE68 1218 aa1.85□□□□□ -2.11
UBP1YDL122W DMC1P25453 334 aa1.85□□□□□ -2.11
UBP1YDL122W SUA7P29055 345 aaPredicted RBP1.85□□□□□ -2.11
UBP1YDL122W MRP21P38175 177 aa1.85□□□□□ -2.11
UBP1YDL122W SPP381P38282 291 aaPredicted RBP1.85□□□□□ -2.11
UBP1YDL122W RFC3P38629 340 aa1.85□□□□□ -2.11
UBP1YDL122W INM1P38710 295 aa1.85□□□□□ -2.11
UBP1YDL122W RRP4P38792 359 aaKnown RBP1.85□□□□□ -2.11
UBP1YDL122W AIM20P40451 204 aa1.85□□□□□ -2.11
UBP1YDL122W YJR011CP47086 261 aaPredicted RBP1.85□□□□□ -2.11
UBP1YDL122W SDT1P53078 280 aa1.85□□□□□ -2.11
UBP1YDL122W YGL114WP53134 725 aa1.85□□□□□ -2.11
UBP1YDL122W PNC1P53184 216 aaKnown RBP1.85□□□□□ -2.11
UBP1YDL122W YMR087WQ04299 284 aa1.85□□□□□ -2.11
UBP1YDL122W HSP31Q04432 237 aa1.85□□□□□ -2.11
UBP1YDL122W THI7Q05998 598 aa1.85□□□□□ -2.11
UBP1YDL122W YPR078CQ06813 372 aa1.85□□□□□ -2.11
UBP1YDL122W RUD3Q12234 484 aaKnown RBP1.85□□□□□ -2.11
UBP1YDL122W MES1P00958 751 aaKnown RBP1.84□□□□□ -2.11
UBP1YDL122W CDC43P18898 376 aa1.84□□□□□ -2.11
UBP1YDL122W URE2P23202 354 aaKnown RBP1.84□□□□□ -2.11
UBP1YDL122W FUN19P28003 413 aaPredicted RBP1.84□□□□□ -2.11
UBP1YDL122W CLG1P35190 452 aa1.84□□□□□ -2.11
UBP1YDL122W QDR3P38227 689 aa1.84□□□□□ -2.11
UBP1YDL122W LAG1P38703 411 aa1.84□□□□□ -2.11
UBP1YDL122W TRR2P38816 342 aa1.84□□□□□ -2.11
UBP1YDL122W CCT2P39076 527 aaKnown RBP1.84□□□□□ -2.11
UBP1YDL122W VRG4P40107 337 aa1.84□□□□□ -2.11
UBP1YDL122W YIL060WP40519 144 aa1.84□□□□□ -2.11
UBP1YDL122W SYG1P40528 902 aa1.84□□□□□ -2.11
UBP1YDL122W EGT2P42835 1041 aa1.84□□□□□ -2.11
UBP1YDL122W LOC1P43586 204 aaPredicted RBP1.84□□□□□ -2.11
UBP1YDL122W IMD3P50095 523 aaKnown RBP1.84□□□□□ -2.11
UBP1YDL122W MPP6P53725 186 aaPredicted RBP1.84□□□□□ -2.11
UBP1YDL122W DSL1P53847 754 aa1.84□□□□□ -2.11
UBP1YDL122W SED1Q01589 338 aa1.84□□□□□ -2.11
UBP1YDL122W ARV1Q06541 321 aa1.84□□□□□ -2.11
UBP1YDL122W YPR091CQ06833 770 aa1.84□□□□□ -2.11
UBP1YDL122W PEX27Q08580 376 aa1.84□□□□□ -2.11
UBP1YDL122W ULA1Q12059 462 aa1.84□□□□□ -2.11
UBP1YDL122W TDH1P00360 332 aaKnown RBP1.83□□□□□ -2.12
UBP1YDL122W AQY1P0CD91 305 aa1.83□□□□□ -2.12
UBP1YDL122W RPL35AP0CX84 120 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms