RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	ORM2	Q06144	216 aa		3.59	□□□□□ -1.83
RPN6	YDL097C	IZH3	Q07959	543 aa		3.59	□□□□□ -1.83
RPN6	YDL097C	TRM13	Q12383	476 aa		3.59	□□□□□ -1.83
RPN6	YDL097C	AHA1	Q12449	350 aa	Known RBP	3.59	□□□□□ -1.83
RPN6	YDL097C	YKL068W-A	Q3E826	78 aa		3.59	□□□□□ -1.83
RPN6	YDL097C	SIR3	P06701	978 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	YML003W	P0CF16	290 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	GPA2	P10823	449 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	PHA2	P32452	334 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	ARB1	P40024	610 aa	Known RBP	3.58	□□□□□ -1.84
RPN6	YDL097C	COG3	P40094	801 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	PFK26	P40433	827 aa	Known RBP	3.58	□□□□□ -1.84
RPN6	YDL097C	IAH1	P41734	238 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	GCD10	P41814	478 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	MDE1	P47095	244 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	GTO1	P48239	356 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	RMI1	Q02685	241 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	FMN1	Q03778	218 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	GRX3	Q03835	250 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	SPC19	Q03954	165 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	STE23	Q06010	1027 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	FRE5	Q08908	694 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	RTN2	Q12443	393 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	YPL247C	Q12523	523 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	YMR030W-A	Q3E760	96 aa		3.58	□□□□□ -1.84
RPN6	YDL097C	YLR302C	O13544	120 aa		3.57	□□□□□ -1.84
RPN6	YDL097C	MRPS28	P21771	286 aa		3.57	□□□□□ -1.84
RPN6	YDL097C	PUT3	P25502	979 aa	Predicted RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	RPL5	P26321	297 aa	Known RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	ACH1	P32316	526 aa		3.57	□□□□□ -1.84
RPN6	YDL097C	RPS1A	P33442	255 aa	Known RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	CUE2	P36075	443 aa	Known RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	YCR087C-A	P37263	153 aa		3.57	□□□□□ -1.84
RPN6	YDL097C	SPP381	P38282	291 aa	Predicted RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	LYS12	P40495	371 aa	Known RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	RPA43	P46669	326 aa		3.57	□□□□□ -1.84
RPN6	YDL097C	AIM22	P47051	409 aa		3.57	□□□□□ -1.84
RPN6	YDL097C	YIP5	P53108	310 aa		3.57	□□□□□ -1.84
RPN6	YDL097C	DBP6	P53734	629 aa	Known RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	IDP3	P53982	420 aa	Known RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	RVB1	Q03940	463 aa	Known RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	SCW10	Q04951	389 aa		3.57	□□□□□ -1.84
RPN6	YDL097C	NIP7	Q08962	181 aa	Known RBP	3.57	□□□□□ -1.84
RPN6	YDL097C	MCP1	Q12106	302 aa		3.57	□□□□□ -1.84
RPN6	YDL097C	RPL39	P04650	51 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	DST1	P07273	309 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	PHO13	P19881	312 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	CTR86	P25355	563 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	ELF1	P36053	145 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	GPI18	P38211	433 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	YHR097C	P38809	366 aa	Known RBP	3.56	□□□□□ -1.84
RPN6	YDL097C	UTP9	P38882	575 aa	Known RBP	3.56	□□□□□ -1.84
RPN6	YDL097C	RBG2	P53295	368 aa	Known RBP	3.56	□□□□□ -1.84
RPN6	YDL097C	USA1	Q03714	838 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	URC2	Q04411	772 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	YLR281C	Q05863	155 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	SSQ1	Q05931	657 aa	Predicted RBP	3.56	□□□□□ -1.84
RPN6	YDL097C	YDL086W	Q07505	273 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	PSR1	Q07800	427 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	IRC19	Q07843	230 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	VCX1	Q99385	411 aa		3.56	□□□□□ -1.84
RPN6	YDL097C	RPL6B	P05739	176 aa	Known RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	RPS16A	P0CX51	143 aa	Known RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	RPS16B	P0CX52	143 aa	Known RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
RPN6	YDL097C	YCP4	P25349	247 aa	Known RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	YCR061W	P25639	631 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	YCR090C	P25654	182 aa	Known RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	DPH5	P32469	300 aa	Predicted RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	SSE2	P32590	693 aa	Known RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	SOR1	P35497	357 aa	Known RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	TSC10	P38342	320 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	MEP2	P41948	499 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	MSE1	P48525	536 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	AVT4	P50944	713 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	GEP7	P53171	287 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	YAP1802	P53309	568 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	MAL13	P53338	473 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	SNF12	P53628	566 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	MSS11	Q03825	758 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	ECM11	Q04110	302 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	YKU80	Q04437	629 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	GTB1	Q04924	702 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	ADE13	Q05911	482 aa	Known RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	SOR2	Q07786	357 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	YPL225W	Q08971	146 aa	Known RBP	3.55	□□□□□ -1.84
RPN6	YDL097C	USV1	Q12132	391 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	MRX4	Q12467	430 aa		3.55	□□□□□ -1.84
RPN6	YDL097C	CBP2	P03874	630 aa	Predicted RBP	3.54	□□□□□ -1.84
RPN6	YDL097C	PDE2	P06776	526 aa		3.54	□□□□□ -1.84
RPN6	YDL097C	YMR085W	P0CF18	432 aa		3.54	□□□□□ -1.84
RPN6	YDL097C	ARO3	P14843	370 aa	Known RBP	3.54	□□□□□ -1.84
RPN6	YDL097C	CKI1	P20485	582 aa		3.54	□□□□□ -1.84
RPN6	YDL097C	AMD2	P22580	549 aa		3.54	□□□□□ -1.84
RPN6	YDL097C	GIT1	P25346	518 aa		3.54	□□□□□ -1.84
RPN6	YDL097C	PUP2	P32379	260 aa		3.54	□□□□□ -1.84
RPN6	YDL097C	MRP20	P32387	263 aa		3.54	□□□□□ -1.84
RPN6	YDL097C	IES6	P32617	166 aa		3.54	□□□□□ -1.84
RPN6	YDL097C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
RPN6	YDL097C	OLA1	P38219	394 aa	Known RBP	3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 79.4 ms