RNA–Protein interactions for RNA: YBR173C

UMP1, Transcript of Chaperone required for correct maturation of the 20S proteasome, yeast

Gene UMP1, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UMP1	YBR173C	RNH202	Q05635	350 aa		4.19	□□□□□ -1.74
UMP1	YBR173C	MLC2	Q06580	163 aa		4.19	□□□□□ -1.74
UMP1	YBR173C	LOT6	Q07923	191 aa		4.19	□□□□□ -1.74
UMP1	YBR173C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
UMP1	YBR173C	VIK1	Q12045	647 aa		4.19	□□□□□ -1.74
UMP1	YBR173C	BAG7	Q12128	409 aa		4.19	□□□□□ -1.74
UMP1	YBR173C	YOL114C	Q12322	202 aa		4.19	□□□□□ -1.74
UMP1	YBR173C	HSP42	Q12329	375 aa		4.19	□□□□□ -1.74
UMP1	YBR173C	RHO1	P06780	209 aa	Known RBP	4.18	□□□□□ -1.74
UMP1	YBR173C	RPC40	P07703	335 aa	Known RBP	4.18	□□□□□ -1.74
UMP1	YBR173C	ARF1	P11076	181 aa	Known RBP	4.18	□□□□□ -1.74
UMP1	YBR173C	FBA1	P14540	359 aa	Known RBP	4.18	□□□□□ -1.74
UMP1	YBR173C	CNA1	P23287	553 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	YCP4	P25349	247 aa	Known RBP	4.18	□□□□□ -1.74
UMP1	YBR173C	HCS1	P34243	683 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	THO1	P40040	218 aa	Known RBP	4.18	□□□□□ -1.74
UMP1	YBR173C	COG3	P40094	801 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	YRB2	P40517	327 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	SNL1	P40548	159 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	AGP3	P43548	558 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	IRC6	P43615	237 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	NUP57	P48837	541 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	SHE4	P51534	789 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	YGL260W	P53056	76 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	PRM8	P53174	237 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	NCE101	Q02820	53 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	RSN1	Q03516	953 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	YDR239C	Q03780	787 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	YMR226C	Q05016	267 aa	Known RBP	4.18	□□□□□ -1.74
UMP1	YBR173C	PAL1	Q05518	499 aa	Known RBP	4.18	□□□□□ -1.74
UMP1	YBR173C	NDL1	Q06568	189 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	SKI7	Q08491	747 aa	Predicted RBP	4.18	□□□□□ -1.74
UMP1	YBR173C	RAX1	Q08760	435 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	RSA1	Q08932	381 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	REX3	Q12090	404 aa		4.18	□□□□□ -1.74
UMP1	YBR173C	ATR1	P13090	542 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	KSS1	P14681	368 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	ERD2	P18414	219 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	POL4	P25615	582 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	PTP2	P29461	750 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	APE2	P32454	952 aa	Known RBP	4.17	□□□□□ -1.74
UMP1	YBR173C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
UMP1	YBR173C	TDA11	P38854	504 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	PHB1	P40961	287 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	FAR7	P43592	221 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	YFR054C	P43622	192 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	GPI8	P49018	411 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	MPC1	P53157	130 aa	Known RBP	4.17	□□□□□ -1.74
UMP1	YBR173C	BRX1	Q08235	291 aa	Known RBP	4.17	□□□□□ -1.74
UMP1	YBR173C	YDL211C	Q12121	372 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	MDM32	Q12171	622 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	NFI1	Q12216	726 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	RRI1	Q12468	440 aa		4.17	□□□□□ -1.74
UMP1	YBR173C	PAR32	Q12515	295 aa	Known RBP	4.17	□□□□□ -1.74
UMP1	YBR173C	YOL163W	P0CF20	169 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	PET122	P10355	254 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	RHB1	P25378	209 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	YCR100C	P25606	316 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	YCR102C	P25608	368 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	ITR2	P30606	609 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	HIR2	P32480	875 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	CYS4	P32582	507 aa	Known RBP	4.16	□□□□□ -1.74
UMP1	YBR173C	MRPL6	P32904	214 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	MDL1	P33310	695 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	SNU114	P36048	1008 aa	Known RBP	4.16	□□□□□ -1.74
UMP1	YBR173C	SRO77	P38163	1010 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	NSG1	P38837	291 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	RCY1	P39531	840 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	SPO73	P40031	143 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	SER3	P40054	469 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	GCN20	P43535	752 aa	Known RBP	4.16	□□□□□ -1.74
UMP1	YBR173C	HMS2	P47175	358 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	IMD4	P50094	524 aa	Known RBP	4.16	□□□□□ -1.74
UMP1	YBR173C	UBP8	P50102	471 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	LSG1	P53145	640 aa	Known RBP	4.16	□□□□□ -1.74
UMP1	YBR173C	YGR168C	P53293	376 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	YMR099C	Q03161	297 aa	Known RBP	4.16	□□□□□ -1.74
UMP1	YBR173C	YDR209C	Q03480	137 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	CGI121	Q03705	181 aa	Known RBP	4.16	□□□□□ -1.74
UMP1	YBR173C	YLR281C	Q05863	155 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	SRL1	Q08673	210 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	YOR214C	Q12282	236 aa		4.16	□□□□□ -1.74
UMP1	YBR173C	SEC62	P21825	274 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	RAD51	P25454	400 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	PBN1	P25580	416 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	MTC4	P38335	694 aa	Known RBP	4.15	□□□□□ -1.75
UMP1	YBR173C	FLO5	P38894	1075 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	PRE6	P40303	254 aa	Known RBP	4.15	□□□□□ -1.75
UMP1	YBR173C	EMC2	P47133	292 aa	Known RBP	4.15	□□□□□ -1.75
UMP1	YBR173C	VMA10	P48836	114 aa	Known RBP	4.15	□□□□□ -1.75
UMP1	YBR173C	SUR7	P54003	302 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	EKI1	Q03764	534 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	MIX14	Q04341	121 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	URC2	Q04411	772 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	YLR446W	Q06204	433 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	YOL024W	Q08172	172 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	RRG7	Q08774	242 aa	Predicted RBP	4.15	□□□□□ -1.75
UMP1	YBR173C	FMP40	Q08968	688 aa	Predicted RBP	4.15	□□□□□ -1.75
UMP1	YBR173C	YOS9	Q99220	542 aa		4.15	□□□□□ -1.75
UMP1	YBR173C	YOL162W	P0CF19	215 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms