RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	NUP116	Q02630	1113 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	SIZ1	Q04195	904 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	YDR262W	Q12331	272 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	TRM10	Q12400	293 aa		4.24	□□□□□ -1.73
SWC3	YAL011W	RPN13	O13563	156 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	REP1	P03871	373 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	HXT2	P23585	541 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	RPL24B	P24000	155 aa	Known RBP	4.23	□□□□□ -1.73
SWC3	YAL011W	SLM5	P25345	492 aa	Known RBP	4.23	□□□□□ -1.73
SWC3	YAL011W	PTC6	P25646	442 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	RAD23	P32628	398 aa	Known RBP	4.23	□□□□□ -1.73
SWC3	YAL011W	LHP1	P33399	275 aa	Known RBP	4.23	□□□□□ -1.73
SWC3	YAL011W	YHR112C	P38716	378 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	YHR210C	P38893	341 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	SEC72	P39742	193 aa	Known RBP	4.23	□□□□□ -1.73
SWC3	YAL011W	SPO73	P40031	143 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	TY1A-DR2	Q03964	440 aa	Known RBP	4.23	□□□□□ -1.73
SWC3	YAL011W	HOF1	Q05080	669 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	SPO77	Q06134	477 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	SDO1	Q07953	250 aa	Known RBP	4.23	□□□□□ -1.73
SWC3	YAL011W	YLR036C	Q07986	203 aa		4.23	□□□□□ -1.73
SWC3	YAL011W	PST2	Q12335	198 aa	Known RBP	4.23	□□□□□ -1.73
SWC3	YAL011W	RPL27A	P0C2H6	136 aa	Known RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	RPL27B	P0C2H7	136 aa	Known RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	SAM35	P14693	329 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	STP2	P38704	541 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SWC3	YAL011W	GGC1	P38988	300 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	AST2	P39945	430 aa	Known RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	STB1	P42845	420 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	HIT1	P46973	164 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	IMP4	P53941	290 aa	Known RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	COG5	P53951	403 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	RSC9	Q03124	581 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	YMR310C	Q04867	317 aa	Predicted RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	REX4	Q08237	289 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	BAG7	Q12128	409 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	YGK3	Q12222	375 aa	Predicted RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	YLR108C	Q12259	485 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	BEM2	P39960	2167 aa	Known RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	YKR104W	P0CE69	306 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	SSO1	P32867	290 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	YMR262W	P38430	313 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	ALP1	P38971	573 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	PLB1	P39105	664 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	PRE6	P40303	254 aa	Known RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	HXT9	P40885	567 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	LSM1	P47017	172 aa	Known RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	YDL186W	P48568	277 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	ROG1	P53118	685 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	LSG1	P53145	640 aa	Known RBP	4.22	□□□□□ -1.73
SWC3	YAL011W	HXT11	P54862	567 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	MSC1	Q03104	513 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	ROT1	Q03691	256 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	YMD8	Q03697	442 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	GAL83	Q04739	417 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	MRPL35	Q06678	367 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	POS5	Q06892	414 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	TEN1	Q07921	160 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	YDL109C	Q12103	647 aa		4.22	□□□□□ -1.73
SWC3	YAL011W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SWC3	YAL011W	COX3	P00420	269 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	GAL4	P04386	881 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	PET9	P18239	318 aa	Known RBP	4.21	□□□□□ -1.74
SWC3	YAL011W	SNF6	P18888	332 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	FPR1	P20081	114 aa	Known RBP	4.21	□□□□□ -1.74
SWC3	YAL011W	ECM25	P32525	599 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	NUF2	P33895	451 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	SRL3	P36167	246 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	PRS4	P38063	326 aa	Predicted RBP	4.21	□□□□□ -1.74
SWC3	YAL011W	ARN2	P38724	620 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	PFS1	P38872	237 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	MET30	P39014	640 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	BUR6	P40096	142 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	JLP2	P40206	208 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	APQ12	P40532	138 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	TED1	P40533	473 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	YJL118W	P47022	219 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	COX18	P53239	316 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	NUP49	Q02199	472 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	MRP51	Q02950	344 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	CYK3	Q07533	885 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	UBA3	Q99344	299 aa		4.21	□□□□□ -1.74
SWC3	YAL011W	YLR415C	O13578	112 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	RIP1	P08067	215 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	RPS1B	P23248	255 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	ELO2	P25358	347 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	IMG1	P25626	169 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SWC3	YAL011W	CTS1	P29029	562 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	EMP70	P32802	667 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	COS9	P36034	407 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	SNU114	P36048	1008 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	IMD2	P38697	523 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	YHR177W	P38867	453 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	GPI16	P38875	610 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	PRP39	P39682	629 aa	Known RBP	4.2	□□□□□ -1.74
SWC3	YAL011W	AIM2	P39721	246 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	FAU1	P40099	211 aa		4.2	□□□□□ -1.74
SWC3	YAL011W	YGR201C	P42936	225 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms