RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B FAD1P38913 306 aa-0.22□□□□□ -2.44
snR39BsnR39B SHC1P39000 512 aa-0.22□□□□□ -2.44
snR39BsnR39B VPS72Q03388 795 aa-0.22□□□□□ -2.44
snR39BsnR39B FCF1Q05498 189 aaPredicted RBP-0.22□□□□□ -2.44
snR39BsnR39B SPH1Q06160 661 aa-0.22□□□□□ -2.44
snR39BsnR39B YOR268CQ08734 132 aa-0.22□□□□□ -2.44
snR39BsnR39B MED1Q12321 566 aa-0.22□□□□□ -2.44
snR39BsnR39B YAL063C-AQ3E791 96 aa-0.22□□□□□ -2.44
snR39BsnR39B YBR056W-AI2HB52 66 aa-0.23□□□□□ -2.45
snR39BsnR39B MDH1P17505 334 aaKnown RBP RIP-Chip data-0.23□□□□□ -2.45not detected
snR39BsnR39B FPR1P20081 114 aaKnown RBP-0.23□□□□□ -2.45
snR39BsnR39B YGL010WP25338 174 aa-0.23□□□□□ -2.45
snR39BsnR39B CAT2P32796 670 aaKnown RBP-0.23□□□□□ -2.45
snR39BsnR39B SFC1P33303 322 aa-0.23□□□□□ -2.45
snR39BsnR39B COG3P40094 801 aa-0.23□□□□□ -2.45
snR39BsnR39B TAF11Q04226 346 aa-0.23□□□□□ -2.45
snR39BsnR39B NDL1Q06568 189 aa-0.23□□□□□ -2.45
snR39BsnR39B UAF30Q08747 228 aa-0.23□□□□□ -2.45
snR39BsnR39B MHP1P43638 1398 aa-0.23□□□□□ -2.45
snR39BsnR39B RAD10P06838 210 aa-0.24□□□□□ -2.45
snR39BsnR39B RPS16AP0CX51 143 aaKnown RBP-0.24□□□□□ -2.45
snR39BsnR39B RPS16BP0CX52 143 aaKnown RBP-0.24□□□□□ -2.45
snR39BsnR39B RED1P14291 827 aa-0.24□□□□□ -2.45
snR39BsnR39B VPH2P32341 215 aa-0.24□□□□□ -2.45
snR39BsnR39B SRP72P38688 640 aaKnown RBP-0.24□□□□□ -2.45
snR39BsnR39B ATG7P38862 630 aa-0.24□□□□□ -2.45
snR39BsnR39B CIS3P47001 227 aa-0.24□□□□□ -2.45
snR39BsnR39B TCB2P48231 1178 aa-0.24□□□□□ -2.45
snR39BsnR39B MEH1Q02205 184 aa-0.24□□□□□ -2.45
snR39BsnR39B CAB5Q03941 241 aa-0.24□□□□□ -2.45
snR39BsnR39B YPR078CQ06813 372 aa-0.24□□□□□ -2.45
snR39BsnR39B RRI2Q12348 645 aa-0.24□□□□□ -2.45
snR39BsnR39B PRP8P33334 2413 aaKnown RBP-0.24□□□□□ -2.45
snR39BsnR39B VAR1P02381 398 aa-0.25□□□□□ -2.45
snR39BsnR39B GFD2P25370 566 aaKnown RBP-0.25□□□□□ -2.45
snR39BsnR39B KRE6P32486 720 aa-0.25□□□□□ -2.45
snR39BsnR39B DOA4P32571 926 aa-0.25□□□□□ -2.45
snR39BsnR39B SPP381P38282 291 aaPredicted RBP-0.25□□□□□ -2.45
snR39BsnR39B YBR220CP38318 560 aa-0.25□□□□□ -2.45
snR39BsnR39B SYS1P41544 203 aa-0.25□□□□□ -2.45
snR39BsnR39B OST3P48439 350 aa-0.25□□□□□ -2.45
snR39BsnR39B YGL114WP53134 725 aa-0.25□□□□□ -2.45
snR39BsnR39B MRPL19P53875 158 aa-0.25□□□□□ -2.45
snR39BsnR39B DAD3P69850 94 aa-0.25□□□□□ -2.45
snR39BsnR39B YOL075CQ08234 1294 aa-0.25□□□□□ -2.45
snR39BsnR39B APC5Q08683 685 aa-0.25□□□□□ -2.45
snR39BsnR39B RPN5Q12250 445 aaKnown RBP-0.25□□□□□ -2.45
snR39BsnR39B RAS2P01120 322 aaKnown RBP-0.26□□□□□ -2.45
snR39BsnR39B RAD7P06779 565 aa-0.26□□□□□ -2.45
snR39BsnR39B PUT1P09368 476 aa-0.26□□□□□ -2.45
snR39BsnR39B MRP7P12687 371 aa-0.26□□□□□ -2.45
snR39BsnR39B ADK2P26364 225 aa-0.26□□□□□ -2.45
snR39BsnR39B EFB1P32471 206 aaKnown RBP-0.26□□□□□ -2.45
snR39BsnR39B BUD2P33314 1104 aa-0.26□□□□□ -2.45
snR39BsnR39B MRPS5P33759 307 aa-0.26□□□□□ -2.45
snR39BsnR39B AIM29P36154 155 aa-0.26□□□□□ -2.45
snR39BsnR39B LSM5P40089 93 aaKnown RBP-0.26□□□□□ -2.45
snR39BsnR39B NDE1P40215 560 aa-0.26□□□□□ -2.45
snR39BsnR39B GPD2P41911 440 aaKnown RBP-0.26□□□□□ -2.45
snR39BsnR39B YJL118WP47022 219 aa-0.26□□□□□ -2.45
snR39BsnR39B YJL016WP47072 561 aa-0.26□□□□□ -2.45
snR39BsnR39B LST7P53237 242 aa-0.26□□□□□ -2.45
snR39BsnR39B SMP3Q04174 516 aa-0.26□□□□□ -2.45
snR39BsnR39B CSM3Q04659 317 aa-0.26□□□□□ -2.45
snR39BsnR39B ARC18Q05933 178 aaKnown RBP-0.26□□□□□ -2.45
snR39BsnR39B YOR292CQ08743 309 aa-0.26□□□□□ -2.45
snR39BsnR39B DCN1Q12395 269 aa-0.26□□□□□ -2.45
snR39BsnR39B GAL7P08431 366 aa-0.27□□□□□ -2.45
snR39BsnR39B CPR2P23285 205 aa-0.27□□□□□ -2.45
snR39BsnR39B SUR1P33300 382 aa-0.27□□□□□ -2.45
snR39BsnR39B LCP5P40079 357 aaPredicted RBP-0.27□□□□□ -2.45
snR39BsnR39B LYS12P40495 371 aaKnown RBP-0.27□□□□□ -2.45
snR39BsnR39B FYV8P46949 817 aaKnown RBP-0.27□□□□□ -2.45
snR39BsnR39B RET3P53600 189 aa-0.27□□□□□ -2.45
snR39BsnR39B YDR541CQ03049 344 aa-0.27□□□□□ -2.45
snR39BsnR39B STE23Q06010 1027 aa-0.27□□□□□ -2.45
snR39BsnR39B IPK1Q06667 281 aa-0.27□□□□□ -2.45
snR39BsnR39B YPL245WQ12179 454 aaKnown RBP-0.27□□□□□ -2.45
snR39BsnR39B RIO1Q12196 484 aaKnown RBP-0.27□□□□□ -2.45
snR39BsnR39B SCM3Q12334 223 aa-0.27□□□□□ -2.45
snR39BsnR39B PDE2P06776 526 aa-0.28□□□□□ -2.45
snR39BsnR39B RPL2AP0CX45 254 aaKnown RBP-0.28□□□□□ -2.45
snR39BsnR39B RPL2BP0CX46 254 aaKnown RBP-0.28□□□□□ -2.45
snR39BsnR39B DBR1P24309 405 aaKnown RBP-0.28□□□□□ -2.45
snR39BsnR39B NFU1P32860 256 aa-0.28□□□□□ -2.45
snR39BsnR39B KTI12P34253 313 aaKnown RBP-0.28□□□□□ -2.45
snR39BsnR39B MBA1P38300 278 aa-0.28□□□□□ -2.45
snR39BsnR39B PET8P38921 284 aa-0.28□□□□□ -2.45
snR39BsnR39B VTC1P40046 129 aaRIP-Chip data-0.28□□□□□ -2.45not detected
snR39BsnR39B TPN1P53099 579 aa-0.28□□□□□ -2.45
snR39BsnR39B YNR066CP53752 436 aa-0.28□□□□□ -2.45
snR39BsnR39B YMR007WQ03675 126 aa-0.28□□□□□ -2.45
snR39BsnR39B DTD1Q07648 150 aaKnown RBP-0.28□□□□□ -2.45
snR39BsnR39B REP1P03871 373 aa-0.29□□□□□ -2.46
snR39BsnR39B CPA1P07258 411 aaKnown RBP-0.29□□□□□ -2.46
snR39BsnR39B SPS100P13130 326 aa-0.29□□□□□ -2.46
snR39BsnR39B POX1P13711 748 aa-0.29□□□□□ -2.46
snR39BsnR39B YCR025CP25352 136 aa-0.29□□□□□ -2.46
snR39BsnR39B KAP104P38217 918 aaKnown RBP-0.29□□□□□ -2.46
snR39BsnR39B LIF1P53150 421 aa-0.29□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms