RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W YEL077W-AP0CX95 160 aa3.4□□□□□ -1.87
VPS27YNR006W YGR296C-BP0CX96 160 aa3.4□□□□□ -1.87
VPS27YNR006W YPL283W-BP0CX97 160 aa3.4□□□□□ -1.87
VPS27YNR006W YPR204C-AP0CX98 160 aa3.4□□□□□ -1.87
VPS27YNR006W NAM2P11325 894 aa3.4□□□□□ -1.87
VPS27YNR006W ATP7P30902 174 aa3.4□□□□□ -1.87
VPS27YNR006W MUD1P32605 298 aaKnown RBP3.4□□□□□ -1.87
VPS27YNR006W FLO5P38894 1075 aa3.4□□□□□ -1.87
VPS27YNR006W SMB1P40018 196 aaKnown RBP3.4□□□□□ -1.87
VPS27YNR006W UTP18P40362 594 aaPredicted RBP3.4□□□□□ -1.87
VPS27YNR006W YIL169CP40442 995 aa3.4□□□□□ -1.87
VPS27YNR006W CFD1P40558 293 aa3.4□□□□□ -1.87
VPS27YNR006W VEL1P53058 206 aa3.4□□□□□ -1.87
VPS27YNR006W SKI8Q02793 397 aaPredicted RBP3.4□□□□□ -1.87
VPS27YNR006W CDD1Q06549 142 aa3.4□□□□□ -1.87
VPS27YNR006W NDE2Q07500 545 aa3.4□□□□□ -1.87
VPS27YNR006W SNX3Q08826 162 aaKnown RBP3.4□□□□□ -1.87
VPS27YNR006W DDC1Q08949 612 aa3.4□□□□□ -1.87
VPS27YNR006W GRE1Q08969 168 aa3.4□□□□□ -1.87
VPS27YNR006W DAP1Q12091 152 aa3.4□□□□□ -1.87
VPS27YNR006W YNL162W-AQ3E7A8 72 aa3.4□□□□□ -1.87
VPS27YNR006W YCR024C-BQ3E7Z8 88 aa3.4□□□□□ -1.87
VPS27YNR006W RPL35AP0CX84 120 aaKnown RBP3.39□□□□□ -1.87
VPS27YNR006W RPL35BP0CX85 120 aaKnown RBP3.39□□□□□ -1.87
VPS27YNR006W CHA1P25379 360 aaKnown RBP3.39□□□□□ -1.87
VPS27YNR006W CPR3P25719 182 aa3.39□□□□□ -1.87
VPS27YNR006W ACP1P32463 125 aa3.39□□□□□ -1.87
VPS27YNR006W SPS19P32573 292 aaKnown RBP3.39□□□□□ -1.87
VPS27YNR006W MCH2P36032 473 aa3.39□□□□□ -1.87
VPS27YNR006W BMT2P38278 337 aa3.39□□□□□ -1.87
VPS27YNR006W TDA11P38854 504 aa3.39□□□□□ -1.87
VPS27YNR006W YAT2P40017 923 aa3.39□□□□□ -1.87
VPS27YNR006W PCL6P40038 420 aa3.39□□□□□ -1.87
VPS27YNR006W YIL024CP40543 189 aa3.39□□□□□ -1.87
VPS27YNR006W RPL10P41805 221 aaKnown RBP3.39□□□□□ -1.87
VPS27YNR006W IDP2P41939 412 aa3.39□□□□□ -1.87
VPS27YNR006W SNO3P43544 222 aa3.39□□□□□ -1.87
VPS27YNR006W UBC13P52490 153 aa3.39□□□□□ -1.87
VPS27YNR006W YGL082WP53155 381 aa3.39□□□□□ -1.87
VPS27YNR006W MTM1P53320 366 aa3.39□□□□□ -1.87
VPS27YNR006W PIR3Q03180 325 aa3.39□□□□□ -1.87
VPS27YNR006W YMR027WQ04371 470 aa3.39□□□□□ -1.87
VPS27YNR006W THI7Q05998 598 aa3.39□□□□□ -1.87
VPS27YNR006W TAZ1Q06510 381 aa3.39□□□□□ -1.87
VPS27YNR006W LOT6Q07923 191 aa3.39□□□□□ -1.87
VPS27YNR006W YEH2Q07950 538 aa3.39□□□□□ -1.87
VPS27YNR006W RDL2Q08742 149 aaKnown RBP3.39□□□□□ -1.87
VPS27YNR006W TAD3Q9URQ3 322 aa3.39□□□□□ -1.87
VPS27YNR006W YAP1P19880 650 aaKnown RBP3.39□□□□□ -1.87
VPS27YNR006W RNA15P25299 296 aaPredicted RBP3.39□□□□□ -1.87
VPS27YNR006W YBR241CP38142 488 aa3.39□□□□□ -1.87
VPS27YNR006W IKS1P47042 667 aa3.39□□□□□ -1.87
VPS27YNR006W VHT1P53241 593 aa3.39□□□□□ -1.87
VPS27YNR006W RPL15BP54780 204 aaPredicted RBP3.39□□□□□ -1.87
VPS27YNR006W RPM2Q02773 1202 aa3.39□□□□□ -1.87
VPS27YNR006W YPL199CQ08954 240 aa3.39□□□□□ -1.87
VPS27YNR006W CRC1Q12289 327 aa3.39□□□□□ -1.87
VPS27YNR006W QCR7P00128 127 aa3.38□□□□□ -1.87
VPS27YNR006W HTB1P02293 131 aaKnown RBP3.38□□□□□ -1.87
VPS27YNR006W HTB2P02294 131 aa3.38□□□□□ -1.87
VPS27YNR006W SPS100P13130 326 aa3.38□□□□□ -1.87
VPS27YNR006W TFS1P14306 219 aa3.38□□□□□ -1.87
VPS27YNR006W GLN3P18494 730 aa3.38□□□□□ -1.87
VPS27YNR006W RNA14P25298 677 aaKnown RBP3.38□□□□□ -1.87
VPS27YNR006W YCR102CP25608 368 aa3.38□□□□□ -1.87
VPS27YNR006W RPL16BP26785 198 aaKnown RBP3.38□□□□□ -1.87
VPS27YNR006W GDH2P33327 1092 aaKnown RBP3.38□□□□□ -1.87
VPS27YNR006W AVT5P38176 459 aa3.38□□□□□ -1.87
VPS27YNR006W OST1P41543 476 aaKnown RBP3.38□□□□□ -1.87
VPS27YNR006W CIN2P46670 268 aa3.38□□□□□ -1.87
VPS27YNR006W ASG7P46993 209 aa3.38□□□□□ -1.87
VPS27YNR006W YJR079WP47126 109 aa3.38□□□□□ -1.87
VPS27YNR006W MAL13P53338 473 aa3.38□□□□□ -1.87
VPS27YNR006W TRM82Q03774 444 aa3.38□□□□□ -1.87
VPS27YNR006W FAR8Q05040 523 aa3.38□□□□□ -1.87
VPS27YNR006W TMS1Q12116 473 aa3.38□□□□□ -1.87
VPS27YNR006W UTP23Q12339 254 aaKnown RBP3.38□□□□□ -1.87
VPS27YNR006W AI5_BETAQ9ZZX0 354 aa3.38□□□□□ -1.87
VPS27YNR006W RFA3P26755 122 aaKnown RBP3.37□□□□□ -1.87
VPS27YNR006W EHD3P28817 500 aa3.37□□□□□ -1.87
VPS27YNR006W SPT4P32914 102 aaPredicted RBP3.37□□□□□ -1.87
VPS27YNR006W RIB5P38145 238 aa3.37□□□□□ -1.87
VPS27YNR006W ECM8P38246 354 aa3.37□□□□□ -1.87
VPS27YNR006W ATG12P38316 186 aa3.37□□□□□ -1.87
VPS27YNR006W SOP4P39543 234 aaPredicted RBP3.37□□□□□ -1.87
VPS27YNR006W NIF3P53081 288 aa3.37□□□□□ -1.87
VPS27YNR006W SWC4P53201 476 aa3.37□□□□□ -1.87
VPS27YNR006W HCH1P53834 153 aa3.37□□□□□ -1.87
VPS27YNR006W YDR209CQ03480 137 aa3.37□□□□□ -1.87
VPS27YNR006W YMR254CQ04838 102 aa3.37□□□□□ -1.87
VPS27YNR006W ATX2Q12067 313 aa3.37□□□□□ -1.87
VPS27YNR006W FRE8Q12209 686 aa3.37□□□□□ -1.87
VPS27YNR006W CSR2Q12734 1121 aa3.37□□□□□ -1.87
VPS27YNR006W TAF2P23255 1407 aa3.37□□□□□ -1.87
VPS27YNR006W HOM6P31116 359 aaKnown RBP3.37□□□□□ -1.87
VPS27YNR006W AGA1P32323 725 aa3.37□□□□□ -1.87
VPS27YNR006W QRI5P32344 111 aa3.37□□□□□ -1.87
VPS27YNR006W NDC1P32500 655 aa3.37□□□□□ -1.87
VPS27YNR006W PDC2P32896 925 aa3.37□□□□□ -1.87
VPS27YNR006W MIX23P38162 196 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms