RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	PHO23	P50947	330 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	SYF2	P53277	215 aa	Predicted RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	YCL001W-A	P87012	153 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	LEE1	Q02799	301 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	PLB3	Q08108	686 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	NBA1	Q08229	501 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	REX3	Q12090	404 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	CDC28	P00546	298 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	ARG80	P07249	177 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	CPR3	P25719	182 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	URK1	P27515	501 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	SHM2	P37291	469 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	IBA57	P47158	497 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	YSA1	Q01976	231 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	HRD3	Q05787	833 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	SOD2	P00447	233 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	SNF5	P18480	905 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	CTS1	P29029	562 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	CYS3	P31373	394 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	DOA4	P32571	926 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	SUR1	P33300	382 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	ELO3	P40319	345 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	PKP2	P53170	491 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	TRM112	P53738	135 aa	Predicted RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	SLG1	P54867	378 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	PLB2	Q03674	706 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	RIM13	Q03792	727 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	MSS11	Q03825	758 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	YMR315W	Q04869	349 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	SDO1	Q07953	250 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	YGR161W-C	Q3E744	92 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	PNO1	Q99216	274 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	SEN1	Q00416	2231 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	SIS1	P25294	352 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	SFA1	P32771	386 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	CDC13	P32797	924 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	GLR1	P41921	483 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	RPE1	P46969	238 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	SAY1	P53324	424 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	HHO1	P53551	258 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	FRE4	P53746	719 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	MRPL22	P53881	309 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	MRP51	Q02950	344 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	DCR2	Q05924	578 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	MDM30	Q05930	598 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	THI73	Q07904	523 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
ATG2	YNL242W	SFG1	Q12507	346 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	PMD1	P32634	1753 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	ZRC1	P20107	442 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	YCR061W	P25639	631 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	AHC2	P25649	128 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	MRP17	P28778	131 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	GUT2	P32191	649 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	SUA5	P32579	426 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
ATG2	YNL242W	CTF13	P35203	478 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	MRPL11	P36521	249 aa	Predicted RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	CHK1	P38147	527 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	PFS2	P42841	465 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	YML053C	Q04978	212 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	RNH202	Q05635	350 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	YLR179C	Q06252	201 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	RAD28	Q12021	506 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	YOL114C	Q12322	202 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	SCH9	P11792	824 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	PDX1	P16451	410 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	RRP7	P25368	297 aa	Predicted RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	KRE6	P32486	720 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	MSN4	P33749	630 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	TAT1	P38085	619 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	TCM62	P38228	572 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	BMT5	P40493	336 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	SNG1	P46950	547 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	TAX4	P47030	604 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	GPG1	P53130	126 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	ART5	P53244	586 aa	Known RBP	3.74	□□□□□ -1.81
ATG2	YNL242W	YAP1802	P53309	568 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	MET14	Q02196	202 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	AGC1	Q12482	902 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	DFG16	Q99234	619 aa		3.74	□□□□□ -1.81
ATG2	YNL242W	AI3	P03877	415 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	CDC9	P04819	755 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	RPB3	P16370	318 aa	Known RBP	3.73	□□□□□ -1.81
ATG2	YNL242W	IKI1	P38874	309 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
ATG2	YNL242W	UBX6	P47049	396 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	YJR120W	P47157	116 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	YGR250C	P53316	781 aa	Known RBP	3.73	□□□□□ -1.81
ATG2	YNL242W	YNL034W	P53963	612 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	YMR252C	Q04814	134 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	HOF1	Q05080	669 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	YLR040C	Q07988	224 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	FYV7	Q12247	151 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	ERP4	Q12450	207 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	MRX4	Q12467	430 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	AI1	P03875	834 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	HOM3	P10869	527 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	AIM29	P36154	155 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	YBR284W	P38150	797 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms