RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeastyeast

Gene TPM1, Length 600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM1YNL079C STE3P06783 470 aa3.25□□□□□ -1.89
TPM1YNL079C CPA1P07258 411 aaKnown RBP3.25□□□□□ -1.89
TPM1YNL079C DST1P07273 309 aa3.25□□□□□ -1.89
TPM1YNL079C SNF4P12904 322 aa3.25□□□□□ -1.89
TPM1YNL079C EPT1P22140 391 aa3.25□□□□□ -1.89
TPM1YNL079C VPH2P32341 215 aa3.25□□□□□ -1.89
TPM1YNL079C GLC7P32598 312 aaKnown RBP3.25□□□□□ -1.89
TPM1YNL079C SDH3P33421 198 aa3.25□□□□□ -1.89
TPM1YNL079C SKG1P36169 355 aa3.25□□□□□ -1.89
TPM1YNL079C YBR241CP38142 488 aa3.25□□□□□ -1.89
TPM1YNL079C BMT2P38278 337 aa3.25□□□□□ -1.89
TPM1YNL079C UTP18P40362 594 aaPredicted RBP3.25□□□□□ -1.89
TPM1YNL079C IDP2P41939 412 aa3.25□□□□□ -1.89
TPM1YNL079C AGP3P43548 558 aa3.25□□□□□ -1.89
TPM1YNL079C KEL2P50090 882 aa3.25□□□□□ -1.89
TPM1YNL079C AVT4P50944 713 aa3.25□□□□□ -1.89
TPM1YNL079C RMR1P53060 241 aa3.25□□□□□ -1.89
TPM1YNL079C SWC4P53201 476 aa3.25□□□□□ -1.89
TPM1YNL079C PCP1P53259 346 aa3.25□□□□□ -1.89
TPM1YNL079C DSL1P53847 754 aa3.25□□□□□ -1.89
TPM1YNL079C ODC1Q03028 310 aa3.25□□□□□ -1.89
TPM1YNL079C CCE1Q03702 353 aa3.25□□□□□ -1.89
TPM1YNL079C YDR387CQ04162 555 aa3.25□□□□□ -1.89
TPM1YNL079C ROY1Q04847 553 aa3.25□□□□□ -1.89
TPM1YNL079C ATG17Q06410 417 aa3.25□□□□□ -1.89
TPM1YNL079C COS7Q07788 383 aa3.25□□□□□ -1.89
TPM1YNL079C SMF3Q12078 473 aaPredicted RBP3.25□□□□□ -1.89
TPM1YNL079C PST1Q12355 444 aa3.25□□□□□ -1.89
TPM1YNL079C AHC1Q12433 566 aa3.25□□□□□ -1.89
TPM1YNL079C YCL012CQ8J0M4 134 aa3.25□□□□□ -1.89
TPM1YNL079C RAS2P01120 322 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C FBA1P14540 359 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C TAL1P15019 335 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C CMK2P22517 447 aa3.24□□□□□ -1.89
TPM1YNL079C PHO84P25297 587 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C RPL5P26321 297 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C RPT5P33297 434 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C SOL2P37262 315 aa3.24□□□□□ -1.89
TPM1YNL079C YCR087C-AP37263 153 aa3.24□□□□□ -1.89
TPM1YNL079C ARA1P38115 344 aa3.24□□□□□ -1.89
TPM1YNL079C IML3P38265 245 aa3.24□□□□□ -1.89
TPM1YNL079C NTC20P38302 140 aaPredicted RBP3.24□□□□□ -1.89
TPM1YNL079C RGI1P40043 161 aaPredicted RBP3.24□□□□□ -1.89
TPM1YNL079C SAS2P40963 338 aa3.24□□□□□ -1.89
TPM1YNL079C GAB1P41733 394 aa3.24□□□□□ -1.89
TPM1YNL079C MPS2P53159 387 aa3.24□□□□□ -1.89
TPM1YNL079C YGR015CP53208 328 aa3.24□□□□□ -1.89
TPM1YNL079C ART5P53244 586 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C MSO1P53604 210 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C WSC2P53832 503 aa3.24□□□□□ -1.89
TPM1YNL079C YNL260CP53846 198 aa3.24□□□□□ -1.89
TPM1YNL079C KAP120Q02932 1032 aa3.24□□□□□ -1.89
TPM1YNL079C PRP3Q03338 469 aaPredicted RBP3.24□□□□□ -1.89
TPM1YNL079C YMR010WQ03687 405 aa3.24□□□□□ -1.89
TPM1YNL079C VHS1Q03785 461 aa3.24□□□□□ -1.89
TPM1YNL079C PEX12Q04370 399 aa3.24□□□□□ -1.89
TPM1YNL079C YMR226CQ05016 267 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C YHC1Q05900 231 aaKnown RBP3.24□□□□□ -1.89
TPM1YNL079C RRP42Q12277 265 aaPredicted RBP3.24□□□□□ -1.89
TPM1YNL079C RPN6Q12377 434 aa3.24□□□□□ -1.89
TPM1YNL079C MSF1P08425 469 aa3.23□□□□□ -1.89
TPM1YNL079C FAR1P21268 830 aa3.23□□□□□ -1.89
TPM1YNL079C PEX3P28795 441 aa3.23□□□□□ -1.89
TPM1YNL079C APE2P32454 952 aaKnown RBP3.23□□□□□ -1.89
TPM1YNL079C ECM25P32525 599 aa3.23□□□□□ -1.89
TPM1YNL079C PIM1P36775 1133 aa3.23□□□□□ -1.89
TPM1YNL079C YCR041WP37265 110 aa3.23□□□□□ -1.89
TPM1YNL079C RBG1P39729 369 aa3.23□□□□□ -1.89
TPM1YNL079C MTW1P39731 289 aa3.23□□□□□ -1.89
TPM1YNL079C YFR018CP43599 363 aa3.23□□□□□ -1.89
TPM1YNL079C YJR030CP47101 745 aa3.23□□□□□ -1.89
TPM1YNL079C EMC2P47133 292 aaKnown RBP3.23□□□□□ -1.89
TPM1YNL079C YJR149WP47177 404 aa3.23□□□□□ -1.89
TPM1YNL079C YIP1P53039 248 aa3.23□□□□□ -1.89
TPM1YNL079C MDM34P53083 459 aa3.23□□□□□ -1.89
TPM1YNL079C COG7P53195 279 aa3.23□□□□□ -1.89
TPM1YNL079C POP6P53218 158 aa3.23□□□□□ -1.89
TPM1YNL079C ZRG17P53735 605 aa3.23□□□□□ -1.89
TPM1YNL079C YNR068CP53754 272 aa3.23□□□□□ -1.89
TPM1YNL079C CAF40P53829 373 aa3.23□□□□□ -1.89
TPM1YNL079C YNL140CP53910 189 aa3.23□□□□□ -1.89
TPM1YNL079C IMP4P53941 290 aaKnown RBP3.23□□□□□ -1.89
TPM1YNL079C TMA20P89886 181 aaPredicted RBP3.23□□□□□ -1.89
TPM1YNL079C SPR6Q01684 191 aa3.23□□□□□ -1.89
TPM1YNL079C MET31Q03081 177 aa3.23□□□□□ -1.89
TPM1YNL079C MDM30Q05930 598 aa3.23□□□□□ -1.89
TPM1YNL079C SSQ1Q05931 657 aaPredicted RBP3.23□□□□□ -1.89
TPM1YNL079C NDL1Q06568 189 aa3.23□□□□□ -1.89
TPM1YNL079C GPI11Q06636 219 aa3.23□□□□□ -1.89
TPM1YNL079C MFG1Q07684 458 aa3.23□□□□□ -1.89
TPM1YNL079C YLL007CQ07799 665 aa3.23□□□□□ -1.89
TPM1YNL079C LOT6Q07923 191 aa3.23□□□□□ -1.89
TPM1YNL079C HNT3Q08702 217 aa3.23□□□□□ -1.89
TPM1YNL079C YPL245WQ12179 454 aaKnown RBP3.23□□□□□ -1.89
TPM1YNL079C VAM3Q12241 283 aa3.23□□□□□ -1.89
TPM1YNL079C RPN5Q12250 445 aaKnown RBP3.23□□□□□ -1.89
TPM1YNL079C YPR011CQ12251 326 aa3.23□□□□□ -1.89
TPM1YNL079C PFK27Q12471 397 aaPredicted RBP3.23□□□□□ -1.89
TPM1YNL079C SNF8Q12483 233 aa3.23□□□□□ -1.89
TPM1YNL079C MHT1Q12525 324 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms