RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W PFS1P38872 237 aa6.34□□□□□ -1.39
HDA1YNL021W YIR016WP40572 265 aa6.34□□□□□ -1.39
HDA1YNL021W QRI1P43123 477 aaKnown RBP6.34□□□□□ -1.39
HDA1YNL021W MRX5P47007 382 aa6.34□□□□□ -1.39
HDA1YNL021W TAF6P53040 516 aa6.34□□□□□ -1.39
HDA1YNL021W OKP1P53298 406 aa6.34□□□□□ -1.39
HDA1YNL021W RVB1Q03940 463 aaKnown RBP6.34□□□□□ -1.39
HDA1YNL021W PFA4Q12006 378 aa6.34□□□□□ -1.39
HDA1YNL021W SAT4P25333 603 aaKnown RBP6.34□□□□□ -1.4
HDA1YNL021W YCR007CP25354 239 aa6.34□□□□□ -1.4
HDA1YNL021W RSA4P25382 515 aaKnown RBP6.34□□□□□ -1.4
HDA1YNL021W MAL32P38158 584 aa6.34□□□□□ -1.4
HDA1YNL021W TVP23P38962 199 aa6.34□□□□□ -1.4
HDA1YNL021W SMX2P40204 77 aaKnown RBP6.34□□□□□ -1.4
HDA1YNL021W YIP1P53039 248 aa6.34□□□□□ -1.4
HDA1YNL021W RMR1P53060 241 aa6.34□□□□□ -1.4
HDA1YNL021W MAL12P53341 584 aa6.34□□□□□ -1.4
HDA1YNL021W YNL040WP53960 456 aaPredicted RBP6.34□□□□□ -1.4
HDA1YNL021W MSS11Q03825 758 aa6.34□□□□□ -1.4
HDA1YNL021W SSK1Q07084 712 aa6.34□□□□□ -1.4
HDA1YNL021W EMP46Q12396 444 aa6.34□□□□□ -1.4
HDA1YNL021W RAD10P06838 210 aa6.33□□□□□ -1.4
HDA1YNL021W CBF1P17106 351 aa6.33□□□□□ -1.4
HDA1YNL021W VMA5P31412 392 aaKnown RBP6.33□□□□□ -1.4
HDA1YNL021W YHL026CP38740 315 aa6.33□□□□□ -1.4
HDA1YNL021W YIL054WP40524 105 aa6.33□□□□□ -1.4
HDA1YNL021W YJL043WP47053 257 aa6.33□□□□□ -1.4
HDA1YNL021W NUP116Q02630 1113 aa6.33□□□□□ -1.4
HDA1YNL021W ARP10Q04549 284 aa6.33□□□□□ -1.4
HDA1YNL021W PRM6Q04705 352 aa6.33□□□□□ -1.4
HDA1YNL021W SLY1P22213 666 aa6.32□□□□□ -1.4
HDA1YNL021W YSR3P23501 404 aa6.32□□□□□ -1.4
HDA1YNL021W ILV6P25605 309 aaKnown RBP6.32□□□□□ -1.4
HDA1YNL021W GDH2P33327 1092 aaKnown RBP6.32□□□□□ -1.4
HDA1YNL021W RIB1P38066 345 aa6.32□□□□□ -1.4
HDA1YNL021W SHE3P38272 425 aaKnown RBP6.32□□□□□ -1.4
HDA1YNL021W SSN8P47821 323 aa6.32□□□□□ -1.4
HDA1YNL021W COS1P53822 381 aa6.32□□□□□ -1.4
HDA1YNL021W GIM5Q04493 163 aa6.32□□□□□ -1.4
HDA1YNL021W GAL4P04386 881 aa6.32□□□□□ -1.4
HDA1YNL021W RAD7P06779 565 aa6.32□□□□□ -1.4
HDA1YNL021W MEI4P29467 408 aa6.32□□□□□ -1.4
HDA1YNL021W DOA1P36037 715 aa6.32□□□□□ -1.4
HDA1YNL021W DTR1P38125 572 aa6.32□□□□□ -1.4
HDA1YNL021W FAA2P39518 744 aa6.32□□□□□ -1.4
HDA1YNL021W AGP3P43548 558 aa6.32□□□□□ -1.4
HDA1YNL021W FRE4P53746 719 aa6.32□□□□□ -1.4
HDA1YNL021W CDC14Q00684 551 aa6.32□□□□□ -1.4
HDA1YNL021W BNA7Q04066 261 aa6.32□□□□□ -1.4
HDA1YNL021W SWF1Q04629 336 aa6.32□□□□□ -1.4
HDA1YNL021W DET1Q99288 334 aaKnown RBP6.32□□□□□ -1.4
HDA1YNL021W ISC1P40015 477 aaKnown RBP6.31□□□□□ -1.4
HDA1YNL021W LST7P53237 242 aa6.31□□□□□ -1.4
HDA1YNL021W PXR1P53335 271 aaPredicted RBP6.31□□□□□ -1.4
HDA1YNL021W STP1Q00947 519 aa6.31□□□□□ -1.4
HDA1YNL021W YMR027WQ04371 470 aa6.31□□□□□ -1.4
HDA1YNL021W TAF9Q05027 157 aa6.31□□□□□ -1.4
HDA1YNL021W SPO77Q06134 477 aa6.31□□□□□ -1.4
HDA1YNL021W ATP6P00854 259 aa6.31□□□□□ -1.4
HDA1YNL021W TPK3P05986 398 aa6.31□□□□□ -1.4
HDA1YNL021W AMD1P15274 810 aaKnown RBP6.31□□□□□ -1.4
HDA1YNL021W HEM15P16622 393 aa6.31□□□□□ -1.4
HDA1YNL021W HCM1P25364 564 aa6.31□□□□□ -1.4
HDA1YNL021W ADE1P27616 306 aa6.31□□□□□ -1.4
HDA1YNL021W PPA2P28239 310 aa6.31□□□□□ -1.4
HDA1YNL021W CSE2P33308 149 aa6.31□□□□□ -1.4
HDA1YNL021W LYS1P38998 373 aaRIP-Chip data6.31□□□□□ -1.4not detected
HDA1YNL021W DHH1P39517 506 aaKnown RBP6.31□□□□□ -1.4
HDA1YNL021W ASG7P46993 209 aa6.31□□□□□ -1.4
HDA1YNL021W AIM24P47127 394 aa6.31□□□□□ -1.4
HDA1YNL021W SEH1P53011 349 aaKnown RBP6.31□□□□□ -1.4
HDA1YNL021W ELP3Q02908 557 aaKnown RBP6.31□□□□□ -1.4
HDA1YNL021W GAT3Q07928 141 aa6.31□□□□□ -1.4
HDA1YNL021W YDR524C-BQ3E6R4 66 aa6.31□□□□□ -1.4
HDA1YNL021W CMD1P06787 147 aaKnown RBP6.3□□□□□ -1.4
HDA1YNL021W RPB8P20436 146 aa6.3□□□□□ -1.4
HDA1YNL021W CDC10P25342 322 aaKnown RBP6.3□□□□□ -1.4
HDA1YNL021W MGT1P26188 188 aa6.3□□□□□ -1.4
HDA1YNL021W PEX3P28795 441 aa6.3□□□□□ -1.4
HDA1YNL021W SKT5P34226 696 aa6.3□□□□□ -1.4
HDA1YNL021W YPT52P36018 234 aaKnown RBP6.3□□□□□ -1.4
HDA1YNL021W YCR041WP37265 110 aa6.3□□□□□ -1.4
HDA1YNL021W DSN1P40568 576 aa6.3□□□□□ -1.4
HDA1YNL021W COX16P47081 118 aa6.3□□□□□ -1.4
HDA1YNL021W MTQ1P53944 314 aa6.3□□□□□ -1.4
HDA1YNL021W SAM50P53969 484 aa6.3□□□□□ -1.4
HDA1YNL021W PBP4Q07362 185 aaKnown RBP6.3□□□□□ -1.4
HDA1YNL021W NCA2Q12374 616 aa6.3□□□□□ -1.4
HDA1YNL021W SAL1D6W196 494 aa6.29□□□□□ -1.4
HDA1YNL021W LSB5P25369 354 aa6.29□□□□□ -1.4
HDA1YNL021W POP5P28005 173 aa6.29□□□□□ -1.4
HDA1YNL021W TPS2P31688 896 aaKnown RBP6.29□□□□□ -1.4
HDA1YNL021W GLG2P47011 380 aa6.29□□□□□ -1.4
HDA1YNL021W YPL080CQ02826 108 aa6.29□□□□□ -1.4
HDA1YNL021W DCR2Q05924 578 aa6.29□□□□□ -1.4
HDA1YNL021W THI20Q08224 551 aa6.29□□□□□ -1.4
HDA1YNL021W TAF10Q12030 206 aa6.29□□□□□ -1.4
HDA1YNL021W HAP2P06774 265 aa6.29□□□□□ -1.4
HDA1YNL021W NHP6BP11633 99 aaKnown RBP6.29□□□□□ -1.4
HDA1YNL021W MKK1P32490 508 aa6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms