RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C RRP42Q12277 265 aaPredicted RBP11.43□□□□□ -0.58
BDF1YLR399C KIN28P06242 306 aa11.42□□□□□ -0.58
BDF1YLR399C RPB3P16370 318 aaKnown RBP11.42□□□□□ -0.58
BDF1YLR399C SLM5P25345 492 aaKnown RBP11.42□□□□□ -0.58
BDF1YLR399C DOA4P32571 926 aa11.42□□□□□ -0.58
BDF1YLR399C PPG1P32838 368 aa11.42□□□□□ -0.58
BDF1YLR399C SFK1P35735 353 aa11.42□□□□□ -0.58
BDF1YLR399C RPS20P38701 121 aaKnown RBP11.42□□□□□ -0.58
BDF1YLR399C YHL026CP38740 315 aa11.42□□□□□ -0.58
BDF1YLR399C ARO9P38840 513 aaPredicted RBP11.42□□□□□ -0.58
BDF1YLR399C PAC10P48363 199 aa11.42□□□□□ -0.58
BDF1YLR399C PGA1P53896 198 aa11.42□□□□□ -0.58
BDF1YLR399C OCA2P53949 197 aa11.42□□□□□ -0.58
BDF1YLR399C YPL108WQ02872 168 aaPredicted RBP11.42□□□□□ -0.58
BDF1YLR399C PUN1Q06991 263 aa11.42□□□□□ -0.58
BDF1YLR399C LUC7Q07508 261 aaPredicted RBP11.42□□□□□ -0.58
BDF1YLR399C YLR046CQ12253 270 aa11.42□□□□□ -0.58
BDF1YLR399C YDL007C-AQ2V2Q0 85 aa11.42□□□□□ -0.58
BDF1YLR399C RPS9BP05755 195 aaKnown RBP11.42□□□□□ -0.58
BDF1YLR399C APN1P22936 367 aa11.42□□□□□ -0.58
BDF1YLR399C MSN4P33749 630 aa11.42□□□□□ -0.58
BDF1YLR399C SRP102P36057 244 aaPredicted RBP11.42□□□□□ -0.58
BDF1YLR399C SOL2P37262 315 aa11.42□□□□□ -0.58
BDF1YLR399C FAU1P40099 211 aa11.42□□□□□ -0.58
BDF1YLR399C POG1P40473 351 aa11.42□□□□□ -0.58
BDF1YLR399C TAX4P47030 604 aa11.42□□□□□ -0.58
BDF1YLR399C LYS5P50113 272 aa11.42□□□□□ -0.58
BDF1YLR399C NRK1P53915 240 aa11.42□□□□□ -0.58
BDF1YLR399C LAP3Q01532 483 aaKnown RBP RIP-Chip data11.42□□□□□ -0.58not detected
BDF1YLR399C VBA4Q04602 768 aaKnown RBP11.42□□□□□ -0.58
BDF1YLR399C MRI1Q06489 411 aaKnown RBP11.42□□□□□ -0.58
BDF1YLR399C SPC3Q12133 184 aa11.42□□□□□ -0.58
BDF1YLR399C TRM13Q12383 476 aa11.42□□□□□ -0.58
BDF1YLR399C FSH3Q99369 266 aa11.42□□□□□ -0.58
BDF1YLR399C SSA3P09435 649 aaKnown RBP11.41□□□□□ -0.58
BDF1YLR399C CDC34P14682 295 aa11.41□□□□□ -0.58
BDF1YLR399C TIP1P27654 210 aaPredicted RBP11.41□□□□□ -0.58
BDF1YLR399C DTR1P38125 572 aa11.41□□□□□ -0.58
BDF1YLR399C VPS25P47142 202 aa11.41□□□□□ -0.58
BDF1YLR399C OCA1P50946 238 aaPredicted RBP11.41□□□□□ -0.58
BDF1YLR399C TPP1Q03796 238 aa11.41□□□□□ -0.58
BDF1YLR399C RAD28Q12021 506 aa11.41□□□□□ -0.58
BDF1YLR399C PER33Q12144 273 aa11.41□□□□□ -0.58
BDF1YLR399C PEX11Q12462 236 aa11.41□□□□□ -0.58
BDF1YLR399C PHO2P07269 559 aa11.4□□□□□ -0.58
BDF1YLR399C GPI12P23797 304 aa11.4□□□□□ -0.58
BDF1YLR399C BUB3P26449 341 aa11.4□□□□□ -0.58
BDF1YLR399C SPT10P35208 640 aa11.4□□□□□ -0.58
BDF1YLR399C TCD2P36101 447 aaKnown RBP11.4□□□□□ -0.58
BDF1YLR399C LNP1P38878 278 aa11.4□□□□□ -0.58
BDF1YLR399C PTC2P39966 464 aaKnown RBP11.4□□□□□ -0.58
BDF1YLR399C LSM4P40070 187 aaKnown RBP11.4□□□□□ -0.58
BDF1YLR399C TOK1P40310 691 aa11.4□□□□□ -0.58
BDF1YLR399C YGL117WP53133 265 aa11.4□□□□□ -0.58
BDF1YLR399C MTQ1P53944 314 aa11.4□□□□□ -0.58
BDF1YLR399C SEN15Q04675 128 aa11.4□□□□□ -0.58
BDF1YLR399C ARG7Q04728 441 aa11.4□□□□□ -0.58
BDF1YLR399C YMR315WQ04869 349 aaKnown RBP11.4□□□□□ -0.58
BDF1YLR399C BOP2Q06150 570 aa11.4□□□□□ -0.58
BDF1YLR399C BTS1Q12051 335 aa11.4□□□□□ -0.58
BDF1YLR399C ADK1P07170 222 aaKnown RBP11.4□□□□□ -0.58
BDF1YLR399C SST2P11972 698 aaKnown RBP11.4□□□□□ -0.58
BDF1YLR399C INM1P38710 295 aa11.4□□□□□ -0.58
BDF1YLR399C TIM17P39515 158 aa11.4□□□□□ -0.58
BDF1YLR399C RPL34BP40525 121 aaKnown RBP11.4□□□□□ -0.58
BDF1YLR399C YJR120WP47157 116 aa11.4□□□□□ -0.58
BDF1YLR399C NMA1Q06178 401 aaKnown RBP11.4□□□□□ -0.58
BDF1YLR399C QCR7P00128 127 aa11.39□□□□□ -0.59
BDF1YLR399C AI1P03875 834 aa11.39□□□□□ -0.59
BDF1YLR399C YMC1P32331 307 aa11.39□□□□□ -0.59
BDF1YLR399C IRS4P36115 615 aaKnown RBP11.39□□□□□ -0.59
BDF1YLR399C AIM3P38266 947 aaKnown RBP11.39□□□□□ -0.59
BDF1YLR399C SNM1P40993 198 aa11.39□□□□□ -0.59
BDF1YLR399C VMA21P41806 77 aa11.39□□□□□ -0.59
BDF1YLR399C UBX6P47049 396 aa11.39□□□□□ -0.59
BDF1YLR399C MDM34P53083 459 aa11.39□□□□□ -0.59
BDF1YLR399C VHT1P53241 593 aa11.39□□□□□ -0.59
BDF1YLR399C YDR387CQ04162 555 aa11.39□□□□□ -0.59
BDF1YLR399C YLR012CQ07927 99 aa11.39□□□□□ -0.59
BDF1YLR399C YPR015CQ12531 247 aa11.39□□□□□ -0.59
BDF1YLR399C SSN3P39073 555 aa11.39□□□□□ -0.59
BDF1YLR399C ALK1P43633 760 aaKnown RBP11.39□□□□□ -0.59
BDF1YLR399C SPO74P45819 413 aa11.39□□□□□ -0.59
BDF1YLR399C RPL17BP46990 184 aaKnown RBP11.39□□□□□ -0.59
BDF1YLR399C DAN1P47178 298 aa11.39□□□□□ -0.59
BDF1YLR399C BUL1P48524 976 aa11.39□□□□□ -0.59
BDF1YLR399C KXD1P53158 218 aa11.39□□□□□ -0.59
BDF1YLR399C PKP2P53170 491 aa11.39□□□□□ -0.59
BDF1YLR399C YKR011CQ02209 353 aa11.39□□□□□ -0.59
BDF1YLR399C RBS1Q05672 457 aaKnown RBP11.39□□□□□ -0.59
BDF1YLR399C YPR127WQ06494 345 aa11.39□□□□□ -0.59
BDF1YLR399C FRE6Q12473 712 aa11.39□□□□□ -0.59
BDF1YLR399C CAN1P04817 590 aa11.38□□□□□ -0.59
BDF1YLR399C RPD3P32561 433 aa11.38□□□□□ -0.59
BDF1YLR399C PAU2P32612 120 aa11.38□□□□□ -0.59
BDF1YLR399C NNF1P47149 201 aa11.38□□□□□ -0.59
BDF1YLR399C RSM27P53305 110 aa11.38□□□□□ -0.59
BDF1YLR399C COQ6P53318 479 aa11.38□□□□□ -0.59
BDF1YLR399C EAF1Q06337 982 aa11.38□□□□□ -0.59
BDF1YLR399C PRM4Q12498 284 aa11.38□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms