RNA–Protein interactions for RNA: YLR013W

GAT3, Transcript of Protein containing GATA family zinc finger motifs, yeast

Gene GAT3, Length 426 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAT3	YLR013W	YPL039W	Q03080	316 aa		4.14	□□□□□ -1.75
GAT3	YLR013W	BUD22	Q04347	519 aa	Known RBP	4.14	□□□□□ -1.75
GAT3	YLR013W	FMP40	Q08968	688 aa	Predicted RBP	4.14	□□□□□ -1.75
GAT3	YLR013W	SRL2	Q12020	392 aa		4.14	□□□□□ -1.75
GAT3	YLR013W	YMR030W-A	Q3E760	96 aa		4.14	□□□□□ -1.75
GAT3	YLR013W	YBR085C-A	O43137	85 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	GFD2	P25370	566 aa	Known RBP	4.13	□□□□□ -1.75
GAT3	YLR013W	RPS1A	P33442	255 aa	Known RBP	4.13	□□□□□ -1.75
GAT3	YLR013W	SPO23	P33757	523 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	YEL068C	P39977	110 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	EFM4	P40516	257 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	GCD10	P41814	478 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	EGT2	P42835	1041 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	CTK2	P46962	323 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	GLO1	P50107	326 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	CDH1	P53197	566 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	MRPL19	P53875	158 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	SLT2	Q00772	484 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	RMI1	Q02685	241 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	CSN9	Q03981	162 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	YMR114C	Q04471	368 aa	Known RBP	4.13	□□□□□ -1.75
GAT3	YLR013W	ADE13	Q05911	482 aa	Known RBP	4.13	□□□□□ -1.75
GAT3	YLR013W	VPS38	Q05919	439 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	YTH1	Q06102	208 aa	Predicted RBP	4.13	□□□□□ -1.75
GAT3	YLR013W	YPR202W	Q08993	238 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	YPL247C	Q12523	523 aa		4.13	□□□□□ -1.75
GAT3	YLR013W	RHO1	P06780	209 aa	Known RBP	4.12	□□□□□ -1.75
GAT3	YLR013W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
GAT3	YLR013W	YCR090C	P25654	182 aa	Known RBP	4.12	□□□□□ -1.75
GAT3	YLR013W	EHD3	P28817	500 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	YCR087C-A	P37263	153 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	NSG1	P38837	291 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	MOB2	P43563	287 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	UBP8	P50102	471 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	LSG1	P53145	640 aa	Known RBP	4.12	□□□□□ -1.75
GAT3	YLR013W	RPL22B	P56628	122 aa	Known RBP	4.12	□□□□□ -1.75
GAT3	YLR013W	CIK1	Q01649	594 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	SKO1	Q02100	647 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	SWP1	Q02795	286 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	RIM9	Q04734	239 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	ARR1	Q06596	294 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	GEP3	Q08622	556 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	GRE1	Q08969	168 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	YLR112W	Q12130	139 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	ATG34	Q12292	412 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	SET6	Q12529	373 aa		4.12	□□□□□ -1.75
GAT3	YLR013W	CMD1	P06787	147 aa	Known RBP	4.11	□□□□□ -1.75
GAT3	YLR013W	MSI1	P13712	422 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	CKI1	P20485	582 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	ELO2	P25358	347 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	LOS1	P33418	1100 aa	Predicted RBP	4.11	□□□□□ -1.75
GAT3	YLR013W	MRPL10	P36520	322 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	YHR177W	P38867	453 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	BUR6	P40096	142 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	YPT32	P51996	222 aa	Known RBP	4.11	□□□□□ -1.75
GAT3	YLR013W	LSC1	P53598	329 aa	Known RBP	4.11	□□□□□ -1.75
GAT3	YLR013W	EAF7	P53911	425 aa	Known RBP	4.11	□□□□□ -1.75
GAT3	YLR013W	CRZ1	P53968	678 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	SED1	Q01589	338 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	UTP6	Q02354	440 aa	Known RBP	4.11	□□□□□ -1.75
GAT3	YLR013W	MET31	Q03081	177 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	RAD30	Q04049	632 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	GMC2	Q06201	188 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	APL4	Q12028	832 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	ATX2	Q12067	313 aa		4.11	□□□□□ -1.75
GAT3	YLR013W	NOP58	Q12499	511 aa	Known RBP	4.11	□□□□□ -1.75
GAT3	YLR013W	RAP1	P11938	827 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	ROX1	P25042	368 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	STE50	P25344	346 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	RPS5	P26783	225 aa	Known RBP	4.1	□□□□□ -1.75
GAT3	YLR013W	MNS1	P32906	549 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	HCS1	P34243	683 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	YOR062C	P36025	268 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	CCT2	P39076	527 aa	Known RBP	4.1	□□□□□ -1.75
GAT3	YLR013W	AIM2	P39721	246 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	JEM1	P40358	645 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	AIM22	P47051	409 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	SIP18	P50263	79 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	SCW4	P53334	386 aa	Known RBP	4.1	□□□□□ -1.75
GAT3	YLR013W	YPR147C	Q06522	304 aa	Known RBP	4.1	□□□□□ -1.75
GAT3	YLR013W	CSI2	Q08054	341 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	YGR035W-A	Q45U48	73 aa		4.1	□□□□□ -1.75
GAT3	YLR013W	RPL42A	P0CX27	106 aa	Known RBP	4.09	□□□□□ -1.75
GAT3	YLR013W	RPL42B	P0CX28	106 aa	Known RBP	4.09	□□□□□ -1.75
GAT3	YLR013W	RPL35A	P0CX84	120 aa	Known RBP	4.09	□□□□□ -1.75
GAT3	YLR013W	RPL35B	P0CX85	120 aa	Known RBP	4.09	□□□□□ -1.75
GAT3	YLR013W	VMA11	P32842	164 aa		4.09	□□□□□ -1.75
GAT3	YLR013W	SSO1	P32867	290 aa		4.09	□□□□□ -1.75
GAT3	YLR013W	PRY2	P36110	329 aa		4.09	□□□□□ -1.75
GAT3	YLR013W	ANS1	P38832	159 aa		4.09	□□□□□ -1.75
GAT3	YLR013W	ATG7	P38862	630 aa		4.09	□□□□□ -1.75
GAT3	YLR013W	YER121W	P40076	114 aa		4.09	□□□□□ -1.75
GAT3	YLR013W	AXL1	P40851	1208 aa		4.09	□□□□□ -1.75
GAT3	YLR013W	DUO1	P53168	247 aa	Known RBP	4.09	□□□□□ -1.75
GAT3	YLR013W	IST1	P53843	298 aa	Predicted RBP	4.09	□□□□□ -1.75
GAT3	YLR013W	RPL6A	Q02326	176 aa	Known RBP	4.09	□□□□□ -1.75
GAT3	YLR013W	SNX41	Q04053	625 aa		4.09	□□□□□ -1.75
GAT3	YLR013W	YDL121C	Q07541	149 aa		4.09	□□□□□ -1.75
GAT3	YLR013W	RDL2	Q08742	149 aa	Known RBP	4.09	□□□□□ -1.75
GAT3	YLR013W	KSS1	P14681	368 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms