RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	NPC2	Q12408	173 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	FMP27	Q06179	2628 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	PHO4	P07270	312 aa	Known RBP	4.63	□□□□□ -1.67
KTI12	YKL110C	DPM1	P14020	267 aa	Known RBP	4.63	□□□□□ -1.67
KTI12	YKL110C	GPI12	P23797	304 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	YCL002C	P25565	263 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	STP22	P25604	385 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	HOG1	P32485	435 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	YPT7	P32939	208 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	YOR062C	P36025	268 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	RSM22	P36056	628 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	RPP1	P38786	293 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	RRP4	P38792	359 aa	Known RBP	4.63	□□□□□ -1.67
KTI12	YKL110C	PTH1	P38876	190 aa	Known RBP	4.63	□□□□□ -1.67
KTI12	YKL110C	YGL235W	P53071	178 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	RNH70	P53331	553 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	MPA43	P53583	542 aa	Predicted RBP	4.63	□□□□□ -1.67
KTI12	YKL110C	PFA5	Q03289	374 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	YML053C	Q04978	212 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	YPR172W	Q06608	200 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	YPR174C	Q06616	221 aa	Predicted RBP	4.63	□□□□□ -1.67
KTI12	YKL110C	MRPL35	Q06678	367 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	YPR091C	Q06833	770 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	YOR365C	Q08844	703 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	PCL9	Q12477	304 aa		4.63	□□□□□ -1.67
KTI12	YKL110C	DET1	Q99288	334 aa	Known RBP	4.63	□□□□□ -1.67
KTI12	YKL110C	SIR2	P06700	562 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	RPL20A	P0CX23	172 aa	Known RBP	4.62	□□□□□ -1.67
KTI12	YKL110C	RPL20B	P0CX24	172 aa	Predicted RBP	4.62	□□□□□ -1.67
KTI12	YKL110C	ERD2	P18414	219 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	RPA135	P22138	1203 aa	Known RBP	4.62	□□□□□ -1.67
KTI12	YKL110C	YCR006C	P25350	157 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	IMG1	P25626	169 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	TIM12	P32830	109 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	MDL1	P33310	695 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	PFS2	P42841	465 aa	Known RBP	4.62	□□□□□ -1.67
KTI12	YKL110C	ALK1	P43633	760 aa	Known RBP	4.62	□□□□□ -1.67
KTI12	YKL110C	ALB1	P47019	175 aa	Predicted RBP	4.62	□□□□□ -1.67
KTI12	YKL110C	IRC18	P47056	224 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	YGL101W	P53144	215 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	RRN9	P53437	365 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	MNT4	P53745	580 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	YNR062C	P53748	327 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	ERG13	P54839	491 aa	Known RBP	4.62	□□□□□ -1.67
KTI12	YKL110C	RCF1	Q03713	159 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	URC2	Q04411	772 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	HLR1	Q04429	423 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	YMR252C	Q04814	134 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	TAZ1	Q06510	381 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	YBL113C	Q7M4S9	792 aa		4.62	□□□□□ -1.67
KTI12	YKL110C	KIN28	P06242	306 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	CAP2	P13517	287 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	GCN3	P14741	305 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	YPK2	P18961	677 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	PHO80	P20052	293 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	HSP30	P25619	332 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	CWP1	P28319	239 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	PRE2	P30656	287 aa	Known RBP	4.61	□□□□□ -1.67
KTI12	YKL110C	FUN26	P31381	517 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	BET3	P36149	193 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	THI2	P38141	450 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	YBR137W	P38276	179 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	YBR238C	P38330	731 aa	Known RBP	4.61	□□□□□ -1.67
KTI12	YKL110C	OCA5	P38738	679 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	SIT1	P39980	628 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	YKE4	P40544	346 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	DIE2	P50076	525 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	ARO8	P53090	500 aa	Known RBP	4.61	□□□□□ -1.67
KTI12	YKL110C	ERV29	P53337	310 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	SEC13	Q04491	297 aa	Known RBP	4.61	□□□□□ -1.67
KTI12	YKL110C	SNT309	Q06091	175 aa	Predicted RBP	4.61	□□□□□ -1.67
KTI12	YKL110C	ORM2	Q06144	216 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	NMA1	Q06178	401 aa	Known RBP	4.61	□□□□□ -1.67
KTI12	YKL110C	SYO1	Q07395	620 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	YLR030W	Q07967	263 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	ENV7	Q12003	364 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	YLR125W	Q12138	136 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	TIR4	Q12218	487 aa	Predicted RBP	4.61	□□□□□ -1.67
KTI12	YKL110C	YOL114C	Q12322	202 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	YLR099W-A	Q3E798	87 aa		4.61	□□□□□ -1.67
KTI12	YKL110C	HFA1	P32874	2273 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	HIS3	P06633	220 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	RPS18A	P0CX55	146 aa	Known RBP	4.6	□□□□□ -1.67
KTI12	YKL110C	RPS18B	P0CX56	146 aa	Predicted RBP	4.6	□□□□□ -1.67
KTI12	YKL110C	PRE7	P23724	241 aa	Known RBP	4.6	□□□□□ -1.67
KTI12	YKL110C	ERG4	P25340	473 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	MTC2	P34246	357 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	VPS51	P36116	164 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	MBA1	P38300	278 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
KTI12	YKL110C	VPS52	P39904	641 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	YIL166C	P40445	542 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	ICE2	P40499	491 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	YIL086C	P40503	102 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	YFR054C	P43622	192 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	TIM54	P47045	478 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	TRM9	P49957	279 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	COS10	P52924	374 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	NCE101	Q02820	53 aa		4.6	□□□□□ -1.67
KTI12	YKL110C	YMR315W	Q04869	349 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms