RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	FMP48	P53233	369 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	APJ1	P53940	528 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	PRO2	P54885	456 aa	Known RBP	1.72	□□□□□ -2.13
NUP82	YJL061W	INP2	Q03824	705 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	UBX2	Q04228	584 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	GMC1	Q04399	608 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	SAM4	Q08985	325 aa	Known RBP	1.72	□□□□□ -2.13
NUP82	YJL061W	REX3	Q12090	404 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	YPL245W	Q12179	454 aa	Known RBP	1.72	□□□□□ -2.13
NUP82	YJL061W	PRM7	Q12459	698 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	MSS116	P15424	664 aa	Known RBP	1.72	□□□□□ -2.13
NUP82	YJL061W	ERD1	P16151	362 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	SWC5	P38326	303 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	YHR035W	P38769	630 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	YDR089W	P38966	869 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	RRG9	P40156	214 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	PFS2	P42841	465 aa	Known RBP	1.72	□□□□□ -2.13
NUP82	YJL061W	VTI1	Q04338	217 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	YPR1	Q12458	312 aa		1.72	□□□□□ -2.13
NUP82	YJL061W	DFM1	Q12743	341 aa	Known RBP	1.72	□□□□□ -2.13
NUP82	YJL061W	GCD2	P12754	651 aa	Predicted RBP	1.71	□□□□□ -2.14
NUP82	YJL061W	COX10	P21592	462 aa		1.71	□□□□□ -2.14
NUP82	YJL061W	ZRT1	P32804	376 aa		1.71	□□□□□ -2.14
NUP82	YJL061W	ZRT3	P34240	503 aa		1.71	□□□□□ -2.14
NUP82	YJL061W	MRPL20	P22354	195 aa	Predicted RBP	1.7	□□□□□ -2.14
NUP82	YJL061W	YKL162C	P36052	402 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	DSE1	P40077	573 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	OSW5	P40219	148 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	SLM1	P40485	686 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	LOH1	P47055	219 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	OKP1	P53298	406 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	ZRG17	P53735	605 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	YPL080C	Q02826	108 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	YMR244W	Q04018	355 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	SNX41	Q04053	625 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	DIB1	Q06819	143 aa	Predicted RBP	1.7	□□□□□ -2.14
NUP82	YJL061W	VIK1	Q12045	647 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	YDL211C	Q12121	372 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	UTP23	Q12339	254 aa	Known RBP	1.7	□□□□□ -2.14
NUP82	YJL061W	CUP2	P15315	225 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	SAR1	P20606	190 aa	Known RBP	1.7	□□□□□ -2.14
NUP82	YJL061W	INO2	P26798	304 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	AST1	P35183	429 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	FET3	P38993	636 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	SOP4	P39543	234 aa	Predicted RBP	1.7	□□□□□ -2.14
NUP82	YJL061W	YFL040W	P43562	540 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	YGL118C	P53132	145 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	VOA1	P53262	265 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	SMD1	Q02260	146 aa	Predicted RBP	1.7	□□□□□ -2.14
NUP82	YJL061W	ECM19	Q06011	112 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	MIM1	Q08176	113 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	TRM10	Q12400	293 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	TFC7	Q12415	435 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	PAA1	Q12447	191 aa	Known RBP	1.7	□□□□□ -2.14
NUP82	YJL061W	BI3	Q9ZZW7	517 aa		1.7	□□□□□ -2.14
NUP82	YJL061W	CPT1	P17898	393 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	YMR262W	P38430	313 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	PET8	P38921	284 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	COX16	P47081	118 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	YGR266W	P53326	701 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	YNR066C	P53752	436 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	ABZ2	Q03266	374 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	YPR195C	Q06594	109 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	MDY2	Q12285	212 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	IZH4	Q99393	312 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	CAR2	P07991	424 aa	Known RBP	1.69	□□□□□ -2.14
NUP82	YJL061W	IFM1	P25038	676 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	RPL5	P26321	297 aa	Known RBP	1.69	□□□□□ -2.14
NUP82	YJL061W	PRY2	P36110	329 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	MNN9	P39107	395 aa	Known RBP	1.69	□□□□□ -2.14
NUP82	YJL061W	PES4	P39684	611 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	ASG7	P46993	209 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	RIB4	P50861	169 aa	Predicted RBP	1.69	□□□□□ -2.14
NUP82	YJL061W	SWC4	P53201	476 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	CAX4	P53223	239 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	DBP6	P53734	629 aa	Known RBP	1.69	□□□□□ -2.14
NUP82	YJL061W	PBP4	Q07362	185 aa	Known RBP	1.69	□□□□□ -2.14
NUP82	YJL061W	LAG2	Q92325	660 aa		1.69	□□□□□ -2.14
NUP82	YJL061W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	1.68	□□□□□ -2.14	not detected
NUP82	YJL061W	MCH2	P36032	473 aa		1.68	□□□□□ -2.14
NUP82	YJL061W	YIL059C	P40520	121 aa		1.68	□□□□□ -2.14
NUP82	YJL061W	CDC40	P40968	455 aa	Predicted RBP	1.68	□□□□□ -2.14
NUP82	YJL061W	COS4	P43542	379 aa		1.68	□□□□□ -2.14
NUP82	YJL061W	RRG8	Q06109	277 aa		1.68	□□□□□ -2.14
NUP82	YJL061W	DCP1	Q12517	231 aa	Predicted RBP	1.68	□□□□□ -2.14
NUP82	YJL061W	FAB1	P34756	2278 aa		1.68	□□□□□ -2.14
NUP82	YJL061W	RAD7	P06779	565 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	RPL16B	P26785	198 aa	Known RBP	1.67	□□□□□ -2.14
NUP82	YJL061W	RPB9	P27999	122 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	CSE1	P33307	960 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	ASP1	P38986	381 aa	Predicted RBP	1.67	□□□□□ -2.14
NUP82	YJL061W	CPR7	P47103	393 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	YLR446W	Q06204	433 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	CUR1	Q06469	252 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	APC9	Q12107	265 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	SIA1	Q12212	622 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	YPS3	Q12303	508 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	VPH2	P32341	215 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	AGA2	P32781	87 aa		1.67	□□□□□ -2.14
NUP82	YJL061W	MRPL6	P32904	214 aa		1.67	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 240.6 ms