RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W RFT1P38206 574 aaPredicted RBP1.86□□□□□ -2.11
PEP8YJL053W YHR035WP38769 630 aa1.86□□□□□ -2.11
PEP8YJL053W TRR2P38816 342 aa1.86□□□□□ -2.11
PEP8YJL053W SDS23P53172 527 aa1.86□□□□□ -2.11
PEP8YJL053W VOA1P53262 265 aa1.86□□□□□ -2.11
PEP8YJL053W UBX2Q04228 584 aa1.86□□□□□ -2.11
PEP8YJL053W VTI1Q04338 217 aa1.86□□□□□ -2.11
PEP8YJL053W GMC1Q04399 608 aa1.86□□□□□ -2.11
PEP8YJL053W STE23Q06010 1027 aa1.86□□□□□ -2.11
PEP8YJL053W VIK1Q12045 647 aa1.86□□□□□ -2.11
PEP8YJL053W YDR018CQ12185 396 aa1.86□□□□□ -2.11
PEP8YJL053W CCH1P50077 2039 aa1.86□□□□□ -2.11
PEP8YJL053W SPS100P13130 326 aa1.85□□□□□ -2.11
PEP8YJL053W MSS116P15424 664 aaKnown RBP1.85□□□□□ -2.11
PEP8YJL053W FUS3P16892 353 aaKnown RBP1.85□□□□□ -2.11
PEP8YJL053W SKG6P32900 734 aaPredicted RBP1.85□□□□□ -2.11
PEP8YJL053W BUD2P33314 1104 aa1.85□□□□□ -2.11
PEP8YJL053W PES4P39684 611 aa1.85□□□□□ -2.11
PEP8YJL053W OSW5P40219 148 aa1.85□□□□□ -2.11
PEP8YJL053W SWC4P53201 476 aa1.85□□□□□ -2.11
PEP8YJL053W OKP1P53298 406 aa1.85□□□□□ -2.11
PEP8YJL053W YGR266WP53326 701 aa1.85□□□□□ -2.11
PEP8YJL053W PRO2P54885 456 aaKnown RBP1.85□□□□□ -2.11
PEP8YJL053W YPL080CQ02826 108 aa1.85□□□□□ -2.11
PEP8YJL053W INP1Q03694 420 aa1.85□□□□□ -2.11
PEP8YJL053W INP2Q03824 705 aa1.85□□□□□ -2.11
PEP8YJL053W MDY2Q12285 212 aa1.85□□□□□ -2.11
PEP8YJL053W UTP23Q12339 254 aaKnown RBP1.85□□□□□ -2.11
PEP8YJL053W TFC7Q12415 435 aa1.85□□□□□ -2.11
PEP8YJL053W IZH4Q99393 312 aa1.85□□□□□ -2.11
PEP8YJL053W RAD7P06779 565 aa1.84□□□□□ -2.11
PEP8YJL053W CAR2P07991 424 aaKnown RBP1.84□□□□□ -2.11
PEP8YJL053W MRPL20P22354 195 aaPredicted RBP1.84□□□□□ -2.11
PEP8YJL053W IFM1P25038 676 aa1.84□□□□□ -2.11
PEP8YJL053W RPL5P26321 297 aaKnown RBP1.84□□□□□ -2.11
PEP8YJL053W RPL16BP26785 198 aaKnown RBP1.84□□□□□ -2.11
PEP8YJL053W INO2P26798 304 aa1.84□□□□□ -2.11
PEP8YJL053W FMT1P32785 401 aa1.84□□□□□ -2.11
PEP8YJL053W CYM1P32898 989 aa1.84□□□□□ -2.11
PEP8YJL053W YMR262WP38430 313 aa1.84□□□□□ -2.11
PEP8YJL053W RCK1P38622 512 aa1.84□□□□□ -2.11
PEP8YJL053W MNN9P39107 395 aaKnown RBP1.84□□□□□ -2.11
PEP8YJL053W BDH1P39714 382 aa1.84□□□□□ -2.11
PEP8YJL053W SLM1P40485 686 aa1.84□□□□□ -2.11
PEP8YJL053W COX16P47081 118 aa1.84□□□□□ -2.11
PEP8YJL053W FMP48P53233 369 aa1.84□□□□□ -2.11
PEP8YJL053W TPC1P53257 314 aa1.84□□□□□ -2.11
PEP8YJL053W ARP5P53946 755 aa1.84□□□□□ -2.11
PEP8YJL053W SNX41Q04053 625 aa1.84□□□□□ -2.11
PEP8YJL053W TRM10Q12400 293 aa1.84□□□□□ -2.11
PEP8YJL053W PRM7Q12459 698 aa1.84□□□□□ -2.11
PEP8YJL053W SAL1D6W196 494 aa1.83□□□□□ -2.12
PEP8YJL053W CSE1P33307 960 aa1.83□□□□□ -2.12
PEP8YJL053W ZRT3P34240 503 aa1.83□□□□□ -2.12
PEP8YJL053W YKL162CP36052 402 aa1.83□□□□□ -2.12
PEP8YJL053W FRM2P37261 193 aa1.83□□□□□ -2.12
PEP8YJL053W FET3P38993 636 aa1.83□□□□□ -2.12
PEP8YJL053W SOP4P39543 234 aaPredicted RBP1.83□□□□□ -2.12
PEP8YJL053W RRG9P40156 214 aa1.83□□□□□ -2.12
PEP8YJL053W PFS2P42841 465 aaKnown RBP1.83□□□□□ -2.12
PEP8YJL053W YFL040WP43562 540 aa1.83□□□□□ -2.12
PEP8YJL053W RIB4P50861 169 aaPredicted RBP1.83□□□□□ -2.12
PEP8YJL053W YGL118CP53132 145 aa1.83□□□□□ -2.12
PEP8YJL053W HST4P53688 370 aa1.83□□□□□ -2.12
PEP8YJL053W DBP6P53734 629 aaKnown RBP1.83□□□□□ -2.12
PEP8YJL053W RRG8Q06109 277 aa1.83□□□□□ -2.12
PEP8YJL053W DIB1Q06819 143 aaPredicted RBP1.83□□□□□ -2.12
PEP8YJL053W RRP42Q12277 265 aaPredicted RBP1.83□□□□□ -2.12
PEP8YJL053W DCP1Q12517 231 aaPredicted RBP1.83□□□□□ -2.12
PEP8YJL053W DFM1Q12743 341 aaKnown RBP1.83□□□□□ -2.12
PEP8YJL053W LAG2Q92325 660 aa1.83□□□□□ -2.12
PEP8YJL053W BI3Q9ZZW7 517 aa1.83□□□□□ -2.12
PEP8YJL053W KOG1P38873 1557 aa1.83□□□□□ -2.12
PEP8YJL053W TDH3P00359 332 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
PEP8YJL053W CUP2P15315 225 aa1.82□□□□□ -2.12
PEP8YJL053W CPT1P17898 393 aa1.82□□□□□ -2.12
PEP8YJL053W MRPL6P32904 214 aa1.82□□□□□ -2.12
PEP8YJL053W AST1P35183 429 aa1.82□□□□□ -2.12
PEP8YJL053W RPC25P35718 212 aa1.82□□□□□ -2.12
PEP8YJL053W SWD2P36104 329 aaPredicted RBP1.82□□□□□ -2.12
PEP8YJL053W TDA11P38854 504 aa1.82□□□□□ -2.12
PEP8YJL053W DSE1P40077 573 aa1.82□□□□□ -2.12
PEP8YJL053W ASG7P46993 209 aa1.82□□□□□ -2.12
PEP8YJL053W KEL2P50090 882 aa1.82□□□□□ -2.12
PEP8YJL053W CAX4P53223 239 aa1.82□□□□□ -2.12
PEP8YJL053W YNR066CP53752 436 aa1.82□□□□□ -2.12
PEP8YJL053W SMD1Q02260 146 aaPredicted RBP1.82□□□□□ -2.12
PEP8YJL053W ABZ2Q03266 374 aa1.82□□□□□ -2.12
PEP8YJL053W YMR244WQ04018 355 aa1.82□□□□□ -2.12
PEP8YJL053W CSI1Q04368 295 aa1.82□□□□□ -2.12
PEP8YJL053W VAC14Q06708 880 aa1.82□□□□□ -2.12
PEP8YJL053W PBP4Q07362 185 aaKnown RBP1.82□□□□□ -2.12
PEP8YJL053W APC9Q12107 265 aa1.82□□□□□ -2.12
PEP8YJL053W YDL211CQ12121 372 aa1.82□□□□□ -2.12
PEP8YJL053W SIA1Q12212 622 aa1.82□□□□□ -2.12
PEP8YJL053W PAA1Q12447 191 aaKnown RBP1.82□□□□□ -2.12
PEP8YJL053W YIL002W-AQ3E7Z5 69 aa1.82□□□□□ -2.12
PEP8YJL053W COX10P21592 462 aa1.81□□□□□ -2.12
PEP8YJL053W MCH2P36032 473 aa1.81□□□□□ -2.12
PEP8YJL053W AIM29P36154 155 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms