RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeast

Gene LSM12, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM12	YHR121W	RPS14B	P39516	138 aa	Known RBP	3.23	□□□□□ -1.89
LSM12	YHR121W	COS4	P43542	379 aa		3.23	□□□□□ -1.89
LSM12	YHR121W	IRA1	P18963	3092 aa		3.23	□□□□□ -1.89
LSM12	YHR121W	TIP20	P33891	701 aa		3.22	□□□□□ -1.89
LSM12	YHR121W	YPT35	P38815	214 aa	Known RBP	3.22	□□□□□ -1.89
LSM12	YHR121W	TRM82	Q03774	444 aa		3.22	□□□□□ -1.89
LSM12	YHR121W	APC4	Q04601	652 aa		3.22	□□□□□ -1.89
LSM12	YHR121W	RPO41	P13433	1351 aa	Known RBP	3.22	□□□□□ -1.89
LSM12	YHR121W	GSC2	P40989	1895 aa		3.22	□□□□□ -1.89
LSM12	YHR121W	MSK1	P32048	576 aa		3.21	□□□□□ -1.9
LSM12	YHR121W	BDH1	P39714	382 aa		3.21	□□□□□ -1.9
LSM12	YHR121W	PEX27	Q08580	376 aa		3.21	□□□□□ -1.9
LSM12	YHR121W	FRE8	Q12209	686 aa		3.21	□□□□□ -1.9
LSM12	YHR121W	TY4B-H	P0C2J7	1802 aa		3.21	□□□□□ -1.9
LSM12	YHR121W	TY4B-J	P47024	1803 aa		3.21	□□□□□ -1.9
LSM12	YHR121W	MNE1	P24720	663 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	URA10	P30402	227 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	YKL071W	P36086	256 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	EPL1	P43572	832 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	NAS6	P50086	228 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	PRM1	P53835	661 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	SUR7	P54003	302 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	YOL075C	Q08234	1294 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	HRT1	Q08273	121 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	YDL211C	Q12121	372 aa		3.2	□□□□□ -1.9
LSM12	YHR121W	PSO2	P30620	661 aa		3.19	□□□□□ -1.9
LSM12	YHR121W	RBG1	P39729	369 aa		3.19	□□□□□ -1.9
LSM12	YHR121W	SNL1	P40548	159 aa		3.19	□□□□□ -1.9
LSM12	YHR121W	YJL144W	P47009	104 aa		3.19	□□□□□ -1.9
LSM12	YHR121W	MLC1	P53141	149 aa		3.19	□□□□□ -1.9
LSM12	YHR121W	RSC1	P53236	928 aa		3.19	□□□□□ -1.9
LSM12	YHR121W	YPR078C	Q06813	372 aa		3.19	□□□□□ -1.9
LSM12	YHR121W	DIB1	Q06819	143 aa	Predicted RBP	3.19	□□□□□ -1.9
LSM12	YHR121W	ALE1	Q08548	619 aa		3.19	□□□□□ -1.9
LSM12	YHR121W	DBR1	P24309	405 aa	Known RBP	3.18	□□□□□ -1.9
LSM12	YHR121W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
LSM12	YHR121W	LCP5	P40079	357 aa	Predicted RBP	3.18	□□□□□ -1.9
LSM12	YHR121W	YNL320W	P42840	284 aa		3.18	□□□□□ -1.9
LSM12	YHR121W	UTP15	Q04305	513 aa	Known RBP	3.18	□□□□□ -1.9
LSM12	YHR121W	GMC1	Q04399	608 aa		3.18	□□□□□ -1.9
LSM12	YHR121W	YFH1	Q07540	174 aa		3.18	□□□□□ -1.9
LSM12	YHR121W	PAR32	Q12515	295 aa	Known RBP	3.18	□□□□□ -1.9
LSM12	YHR121W	COX10	P21592	462 aa		3.17	□□□□□ -1.9
LSM12	YHR121W	MPS2	P53159	387 aa		3.17	□□□□□ -1.9
LSM12	YHR121W	LST7	P53237	242 aa		3.17	□□□□□ -1.9
LSM12	YHR121W	SCS7	Q03529	384 aa		3.17	□□□□□ -1.9
LSM12	YHR121W	TY3A-G	Q12173	290 aa		3.17	□□□□□ -1.9
LSM12	YHR121W	TY3A-I	Q99219	290 aa		3.17	□□□□□ -1.9
LSM12	YHR121W	FSH3	Q99369	266 aa		3.17	□□□□□ -1.9
LSM12	YHR121W	FAR1	P21268	830 aa		3.16	□□□□□ -1.9
LSM12	YHR121W	PCH2	P38126	564 aa		3.16	□□□□□ -1.9
LSM12	YHR121W	TAE1	P38340	232 aa		3.16	□□□□□ -1.9
LSM12	YHR121W	NRM1	P53718	249 aa		3.16	□□□□□ -1.9
LSM12	YHR121W	ACC1	Q00955	2233 aa	Known RBP	3.16	□□□□□ -1.9
LSM12	YHR121W	CUP2	P15315	225 aa		3.15	□□□□□ -1.91
LSM12	YHR121W	LRP1	P38801	184 aa	Known RBP	3.15	□□□□□ -1.91
LSM12	YHR121W	GDI1	P39958	451 aa	Known RBP	3.15	□□□□□ -1.91
LSM12	YHR121W	YFR018C	P43599	363 aa		3.15	□□□□□ -1.91
LSM12	YHR121W	HIT1	P46973	164 aa		3.15	□□□□□ -1.91
LSM12	YHR121W	SMD1	Q02260	146 aa	Predicted RBP	3.15	□□□□□ -1.91
LSM12	YHR121W	AIM33	Q04516	312 aa		3.15	□□□□□ -1.91
LSM12	YHR121W	RPN8	Q08723	338 aa	Known RBP	3.15	□□□□□ -1.91
LSM12	YHR121W	SIR4	P11978	1358 aa		3.14	□□□□□ -1.91
LSM12	YHR121W	RPL6B	P05739	176 aa	Known RBP	3.14	□□□□□ -1.91
LSM12	YHR121W	CPT1	P17898	393 aa		3.14	□□□□□ -1.91
LSM12	YHR121W	GDT1	P38301	280 aa	Predicted RBP	3.14	□□□□□ -1.91
LSM12	YHR121W	YMR262W	P38430	313 aa		3.14	□□□□□ -1.91
LSM12	YHR121W	RPL6A	Q02326	176 aa	Known RBP	3.14	□□□□□ -1.91
LSM12	YHR121W	YDR018C	Q12185	396 aa		3.14	□□□□□ -1.91
LSM12	YHR121W	FLO1	P32768	1537 aa		3.14	□□□□□ -1.91
LSM12	YHR121W	VPS63	O13549	108 aa		3.13	□□□□□ -1.91
LSM12	YHR121W	RRB1	Q04225	511 aa	Known RBP	3.13	□□□□□ -1.91
LSM12	YHR121W	ERP4	Q12450	207 aa		3.13	□□□□□ -1.91
LSM12	YHR121W	SAL1	D6W196	494 aa		3.12	□□□□□ -1.91
LSM12	YHR121W	OSM1	P21375	501 aa	Known RBP	3.12	□□□□□ -1.91
LSM12	YHR121W	DAL5	P15365	543 aa		3.11	□□□□□ -1.91
LSM12	YHR121W	MDL1	P33310	695 aa		3.11	□□□□□ -1.91
LSM12	YHR121W	SMP3	Q04174	516 aa		3.11	□□□□□ -1.91
LSM12	YHR121W	RPS23A	P0CX29	145 aa	Known RBP	3.1	□□□□□ -1.91
LSM12	YHR121W	RPS23B	P0CX30	145 aa		3.1	□□□□□ -1.91
LSM12	YHR121W	RPS16A	P0CX51	143 aa	Known RBP	3.1	□□□□□ -1.91
LSM12	YHR121W	RPS16B	P0CX52	143 aa	Known RBP	3.1	□□□□□ -1.91
LSM12	YHR121W	ARF2	P19146	181 aa	Known RBP	3.1	□□□□□ -1.91
LSM12	YHR121W	ATG7	P38862	630 aa		3.1	□□□□□ -1.91
LSM12	YHR121W	RPS24A	P0CX31	135 aa	Known RBP	3.09	□□□□□ -1.91
LSM12	YHR121W	RPS24B	P0CX32	135 aa	Known RBP	3.09	□□□□□ -1.91
LSM12	YHR121W	GRR1	P24814	1151 aa		3.09	□□□□□ -1.91
LSM12	YHR121W	LSG1	P53145	640 aa	Known RBP	3.09	□□□□□ -1.91
LSM12	YHR121W	INP1	Q03694	420 aa		3.09	□□□□□ -1.91
LSM12	YHR121W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.09	□□□□□ -1.91
LSM12	YHR121W	MEC1	P38111	2368 aa		3.09	□□□□□ -1.92
LSM12	YHR121W	SCH9	P11792	824 aa	Known RBP	3.08	□□□□□ -1.92
LSM12	YHR121W	UTR5	P32630	166 aa		3.08	□□□□□ -1.92
LSM12	YHR121W	YIL054W	P40524	105 aa		3.08	□□□□□ -1.92
LSM12	YHR121W	ASG7	P46993	209 aa		3.08	□□□□□ -1.92
LSM12	YHR121W	CSM3	Q04659	317 aa		3.08	□□□□□ -1.92
LSM12	YHR121W	GLE1	Q12315	538 aa		3.08	□□□□□ -1.92
LSM12	YHR121W	DFM1	Q12743	341 aa	Known RBP	3.08	□□□□□ -1.92
LSM12	YHR121W	CSF1	Q12150	2958 aa		3.07	□□□□□ -1.92
LSM12	YHR121W	CKI1	P20485	582 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms