RNA–Protein interactions for RNA: YHL027W

RIM101, Transcript of Cys2His2 zinc-finger transcriptional repressor, yeast

Gene RIM101, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM101	YHL027W	SDO1	Q07953	250 aa	Known RBP	5.21	□□□□□ -1.58
RIM101	YHL027W	ATX2	Q12067	313 aa		5.21	□□□□□ -1.58
RIM101	YHL027W	MRX4	Q12467	430 aa		5.21	□□□□□ -1.58
RIM101	YHL027W	QCR7	P00128	127 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	GAL80	P04387	435 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	PUT1	P09368	476 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	CKA1	P15790	372 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	YPK2	P18961	677 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	ZRC1	P20107	442 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	MIH1	P23748	554 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
RIM101	YHL027W	FAA1	P30624	700 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	PRE4	P30657	266 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	YNK1	P36010	153 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	SCO2	P38072	301 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	ERT1	P38140	529 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	TCM62	P38228	572 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	MTC4	P38335	694 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	LAS21	P40367	830 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	GZF3	P42944	551 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	LYS20	P48570	428 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	EXG2	P52911	562 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	VPS73	P53142	486 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	RPN14	P53196	417 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	SYF2	P53277	215 aa	Predicted RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	FMP41	P53889	259 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	ARG5,6	Q01217	863 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	YMR265C	Q03508	461 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	SWF1	Q04629	336 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	TMA10	Q06177	86 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	CDD1	Q06549	142 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	RRI1	Q12468	440 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	YLR358C	O13565	187 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	ADE8	P04161	214 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	MRP17	P28778	131 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	ERG3	P32353	365 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	DOA4	P32571	926 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	SOL2	P37262	315 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	YCR087C-A	P37263	153 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	POL12	P38121	705 aa	Predicted RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	GND1	P38720	489 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	CTF8	P38877	133 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	ASP1	P38986	381 aa	Predicted RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	PTC2	P39966	464 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	PUS4	P48567	403 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	SEH1	P53011	349 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	TIM13	P53299	105 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	YSA1	Q01976	231 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	PEX29	Q03370	554 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	PAL1	Q05518	499 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	VID22	Q05934	901 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	YPR127W	Q06494	345 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	YLR040C	Q07988	224 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	YDL176W	Q12027	708 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	BSC1	Q12140	328 aa		5.2	□□□□□ -1.58
RIM101	YHL027W	TIR4	Q12218	487 aa	Predicted RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	PDH1	Q12428	516 aa	Known RBP	5.2	□□□□□ -1.58
RIM101	YHL027W	HIS1	P00498	297 aa	Known RBP	5.19	□□□□□ -1.58
RIM101	YHL027W	SCEI	P03882	235 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	PCL2	P25693	308 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	YUH1	P35127	236 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	SFK1	P35735	353 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	ELF1	P36053	145 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	MRPL15	P36523	253 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	SDH4	P37298	181 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	DTR1	P38125	572 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	YBR284W	P38150	797 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	SHE1	P38200	338 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	POP7	P38291	140 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	SMK1	P41808	388 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	DAN1	P47178	298 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	TIS11	P47977	285 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	MNN10	P50108	393 aa	Known RBP	5.19	□□□□□ -1.58
RIM101	YHL027W	ART5	P53244	586 aa	Known RBP	5.19	□□□□□ -1.58
RIM101	YHL027W	ASI3	P53983	676 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	YLR099W-A	Q3E798	87 aa		5.19	□□□□□ -1.58
RIM101	YHL027W	CDC28	P00546	298 aa	Known RBP	5.18	□□□□□ -1.58
RIM101	YHL027W	MRP1	P10662	321 aa	Known RBP	5.18	□□□□□ -1.58
RIM101	YHL027W	RPB3	P16370	318 aa	Known RBP	5.18	□□□□□ -1.58
RIM101	YHL027W	SEC59	P20048	519 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	SEC22	P22214	214 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	FUN26	P31381	517 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	SEF1	P34228	1148 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	RMA1	P36001	430 aa	Known RBP	5.18	□□□□□ -1.58
RIM101	YHL027W	COS9	P36034	407 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	KAE1	P36132	386 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	OSW5	P40219	148 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	LTP1	P40347	161 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	YIL108W	P40483	696 aa	Known RBP	5.18	□□□□□ -1.58
RIM101	YHL027W	PFA3	P42836	336 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	COX16	P47081	118 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	VPS62	P53285	467 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	NRK1	P53915	240 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	EOS1	P53938	366 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	GPI15	P53961	229 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	VBA4	Q04602	768 aa	Known RBP	5.18	□□□□□ -1.58
RIM101	YHL027W	HDA2	Q06629	674 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	IPK1	Q06667	281 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	MED7	Q08278	222 aa		5.18	□□□□□ -1.58
RIM101	YHL027W	AKR2	Q12013	749 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 25 ms