RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W YPR078CQ06813 372 aa2.12□□□□□ -2.07
SSF2YDR312W SFG1Q12507 346 aa2.12□□□□□ -2.07
SSF2YDR312W FSH3Q99369 266 aa2.12□□□□□ -2.07
SSF2YDR312W PRP8P33334 2413 aaKnown RBP2.12□□□□□ -2.07
SSF2YDR312W CBP6P07253 162 aaPredicted RBP2.11□□□□□ -2.07
SSF2YDR312W RNR2P09938 399 aaKnown RBP2.11□□□□□ -2.07
SSF2YDR312W ARF2P19146 181 aaKnown RBP2.11□□□□□ -2.07
SSF2YDR312W GIT1P25346 518 aa2.11□□□□□ -2.07
SSF2YDR312W LDS1P31379 325 aa2.11□□□□□ -2.07
SSF2YDR312W SRB2P34162 210 aa2.11□□□□□ -2.07
SSF2YDR312W MRPL27P36526 146 aaPredicted RBP2.11□□□□□ -2.07
SSF2YDR312W RBG1P39729 369 aa2.11□□□□□ -2.07
SSF2YDR312W YHC3P47040 408 aa2.11□□□□□ -2.07
SSF2YDR312W TRF5P48561 642 aaKnown RBP2.11□□□□□ -2.07
SSF2YDR312W YGL262WP53054 175 aa2.11□□□□□ -2.07
SSF2YDR312W CUE3P53137 624 aaKnown RBP2.11□□□□□ -2.07
SSF2YDR312W VHS1Q03785 461 aa2.11□□□□□ -2.07
SSF2YDR312W MSC3Q05812 728 aa2.11□□□□□ -2.07
SSF2YDR312W SFM1Q12314 213 aa2.11□□□□□ -2.07
SSF2YDR312W GLE1Q12315 538 aa2.11□□□□□ -2.07
SSF2YDR312W PSY3Q12318 242 aa2.11□□□□□ -2.07
SSF2YDR312W APC2Q12440 853 aa2.11□□□□□ -2.07
SSF2YDR312W YBL111CQ3E7Y5 667 aa2.11□□□□□ -2.07
SSF2YDR312W RGS2Q99188 309 aa2.11□□□□□ -2.07
SSF2YDR312W YOR338WQ99326 363 aa2.11□□□□□ -2.07
SSF2YDR312W DUR1,2P32528 1835 aaKnown RBP2.11□□□□□ -2.07
SSF2YDR312W FKS1P38631 1876 aaKnown RBP2.11□□□□□ -2.07
SSF2YDR312W HEM4P06174 275 aa2.1□□□□□ -2.07
SSF2YDR312W TRX1P22217 103 aaKnown RBP2.1□□□□□ -2.07
SSF2YDR312W RSA4P25382 515 aaKnown RBP2.1□□□□□ -2.07
SSF2YDR312W RPL16AP26784 199 aaKnown RBP2.1□□□□□ -2.07
SSF2YDR312W EBP2P36049 427 aaKnown RBP2.1□□□□□ -2.07
SSF2YDR312W PEX32P38292 413 aa2.1□□□□□ -2.07
SSF2YDR312W WSC4P38739 605 aa2.1□□□□□ -2.07
SSF2YDR312W SEH1P53011 349 aaKnown RBP2.1□□□□□ -2.07
SSF2YDR312W VAC7P53950 1165 aa2.1□□□□□ -2.07
SSF2YDR312W PRP38Q00723 242 aaPredicted RBP2.1□□□□□ -2.07
SSF2YDR312W TPS1Q00764 495 aaKnown RBP2.1□□□□□ -2.07
SSF2YDR312W YLH47Q06493 454 aa2.1□□□□□ -2.07
SSF2YDR312W YOR376WQ08900 122 aa2.1□□□□□ -2.07
SSF2YDR312W LDB17Q12342 491 aa2.1□□□□□ -2.07
SSF2YDR312W FOL3Q12676 427 aaPredicted RBP2.1□□□□□ -2.07
SSF2YDR312W CSF1Q12150 2958 aa2.1□□□□□ -2.07
SSF2YDR312W MYO1P08964 1928 aa2.1□□□□□ -2.07
SSF2YDR312W HAP2P06774 265 aa2.1□□□□□ -2.07
SSF2YDR312W RPS19AP07280 144 aaKnown RBP2.1□□□□□ -2.07
SSF2YDR312W RPS19BP07281 144 aaPredicted RBP2.1□□□□□ -2.07
SSF2YDR312W DBR1P24309 405 aaKnown RBP2.1□□□□□ -2.07
SSF2YDR312W PET18P25362 215 aa2.1□□□□□ -2.07
SSF2YDR312W DCC1P25559 380 aa2.1□□□□□ -2.07
SSF2YDR312W ERG9P29704 444 aa2.1□□□□□ -2.07
SSF2YDR312W ACB1P31787 87 aa2.1□□□□□ -2.07
SSF2YDR312W MRPS9P38120 278 aa2.1□□□□□ -2.07
SSF2YDR312W NAS2P40555 220 aa2.1□□□□□ -2.07
SSF2YDR312W SHE4P51534 789 aa2.1□□□□□ -2.07
SSF2YDR312W YGL114WP53134 725 aa2.1□□□□□ -2.07
SSF2YDR312W LST7P53237 242 aa2.1□□□□□ -2.07
SSF2YDR312W VHT1P53241 593 aa2.1□□□□□ -2.07
SSF2YDR312W YNL146WP53906 100 aa2.1□□□□□ -2.07
SSF2YDR312W YLR177WQ06251 628 aa2.1□□□□□ -2.07
SSF2YDR312W YPQ1Q12010 308 aa2.1□□□□□ -2.07
SSF2YDR312W RTC5Q12108 567 aaKnown RBP2.1□□□□□ -2.07
SSF2YDR312W UBA3Q99344 299 aa2.1□□□□□ -2.07
SSF2YDR312W STF1P01098 86 aa2.09□□□□□ -2.08
SSF2YDR312W STE3P06783 470 aa2.09□□□□□ -2.08
SSF2YDR312W YLL053CP0CD98 152 aa2.09□□□□□ -2.08
SSF2YDR312W RPL43AP0CX25 92 aaKnown RBP2.09□□□□□ -2.08
SSF2YDR312W RPL43BP0CX26 92 aa2.09□□□□□ -2.08
SSF2YDR312W SAG1P20840 650 aa2.09□□□□□ -2.08
SSF2YDR312W PDC2P32896 925 aa2.09□□□□□ -2.08
SSF2YDR312W CSE1P33307 960 aa2.09□□□□□ -2.08
SSF2YDR312W ECT1P33412 323 aa2.09□□□□□ -2.08
SSF2YDR312W MRPS5P33759 307 aa2.09□□□□□ -2.08
SSF2YDR312W MYO3P36006 1272 aa2.09□□□□□ -2.08
SSF2YDR312W SOL2P37262 315 aa2.09□□□□□ -2.08
SSF2YDR312W HMT1P38074 348 aa2.09□□□□□ -2.08
SSF2YDR312W BMT2P38278 337 aa2.09□□□□□ -2.08
SSF2YDR312W LIN1P38852 340 aaPredicted RBP2.09□□□□□ -2.08
SSF2YDR312W POP2P39008 433 aa2.09□□□□□ -2.08
SSF2YDR312W KTR6P54070 446 aa2.09□□□□□ -2.08
SSF2YDR312W YDR115WQ04598 105 aa2.09□□□□□ -2.08
SSF2YDR312W ARR1Q06596 294 aa2.09□□□□□ -2.08
SSF2YDR312W PML1Q07930 204 aaPredicted RBP2.09□□□□□ -2.08
SSF2YDR312W APC5Q08683 685 aa2.09□□□□□ -2.08
SSF2YDR312W YDL109CQ12103 647 aa2.09□□□□□ -2.08
SSF2YDR312W ATP16Q12165 160 aa2.09□□□□□ -2.08
SSF2YDR312W YDR262WQ12331 272 aa2.09□□□□□ -2.08
SSF2YDR312W AIM45Q12480 344 aaKnown RBP2.09□□□□□ -2.08
SSF2YDR312W NCB2Q92317 146 aa2.09□□□□□ -2.08
SSF2YDR312W DET1Q99288 334 aaKnown RBP2.09□□□□□ -2.08
SSF2YDR312W CDC37P06101 506 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W RPL23AP0CX41 137 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W RPL23BP0CX42 137 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W RPS16AP0CX51 143 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W RPS16BP0CX52 143 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W MSS116P15424 664 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W CKI1P20485 582 aa2.08□□□□□ -2.08
SSF2YDR312W FAR1P21268 830 aa2.08□□□□□ -2.08
SSF2YDR312W HXT2P23585 541 aa2.08□□□□□ -2.08
SSF2YDR312W RBK1P25332 333 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms