RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C IZH4Q99393 312 aa2.43□□□□□ -2.02
SRD1YCR018C SAL1D6W196 494 aa2.42□□□□□ -2.02
SRD1YCR018C CBP6P07253 162 aaPredicted RBP2.42□□□□□ -2.02
SRD1YCR018C OM45P16547 393 aa2.42□□□□□ -2.02
SRD1YCR018C GPI12P23797 304 aa2.42□□□□□ -2.02
SRD1YCR018C PRS1P32895 427 aaKnown RBP2.42□□□□□ -2.02
SRD1YCR018C ECT1P33412 323 aa2.42□□□□□ -2.02
SRD1YCR018C MRPL27P36526 146 aaPredicted RBP2.42□□□□□ -2.02
SRD1YCR018C ECM34P38728 170 aa2.42□□□□□ -2.02
SRD1YCR018C EFM1P38732 585 aa2.42□□□□□ -2.02
SRD1YCR018C PEX18P38855 283 aa2.42□□□□□ -2.02
SRD1YCR018C GGC1P38988 300 aa2.42□□□□□ -2.02
SRD1YCR018C ALD5P40047 520 aaKnown RBP2.42□□□□□ -2.02
SRD1YCR018C YFL040WP43562 540 aa2.42□□□□□ -2.02
SRD1YCR018C GCD14P46959 383 aaPredicted RBP2.42□□□□□ -2.02
SRD1YCR018C YNL260CP53846 198 aa2.42□□□□□ -2.02
SRD1YCR018C YNL050CP53952 270 aa2.42□□□□□ -2.02
SRD1YCR018C VHS1Q03785 461 aa2.42□□□□□ -2.02
SRD1YCR018C ECM18Q04623 453 aa2.42□□□□□ -2.02
SRD1YCR018C ERV41Q04651 352 aa2.42□□□□□ -2.02
SRD1YCR018C FAR10Q06001 478 aa2.42□□□□□ -2.02
SRD1YCR018C BCP1Q06338 283 aa2.42□□□□□ -2.02
SRD1YCR018C RRP42Q12277 265 aaPredicted RBP2.42□□□□□ -2.02
SRD1YCR018C TFC7Q12415 435 aa2.42□□□□□ -2.02
SRD1YCR018C MRPL20P22354 195 aaPredicted RBP2.41□□□□□ -2.02
SRD1YCR018C RPL16BP26785 198 aaKnown RBP2.41□□□□□ -2.02
SRD1YCR018C PPQ1P32945 549 aa2.41□□□□□ -2.02
SRD1YCR018C CBF5P33322 483 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SRD1YCR018C TAE1P38340 232 aa2.41□□□□□ -2.02
SRD1YCR018C CTM1P38818 585 aa2.41□□□□□ -2.02
SRD1YCR018C CHL4P38907 458 aa2.41□□□□□ -2.02
SRD1YCR018C GTO1P48239 356 aa2.41□□□□□ -2.02
SRD1YCR018C SWC4P53201 476 aa2.41□□□□□ -2.02
SRD1YCR018C SCS7Q03529 384 aa2.41□□□□□ -2.02
SRD1YCR018C TSA2Q04120 196 aa2.41□□□□□ -2.02
SRD1YCR018C API2Q04413 109 aa2.41□□□□□ -2.02
SRD1YCR018C MEK1P24719 497 aaPredicted RBP2.4□□□□□ -2.03
SRD1YCR018C MID2P36027 376 aa2.4□□□□□ -2.03
SRD1YCR018C YKL070WP36087 169 aa2.4□□□□□ -2.03
SRD1YCR018C MRPS9P38120 278 aa2.4□□□□□ -2.03
SRD1YCR018C SMP1P38128 452 aa2.4□□□□□ -2.03
SRD1YCR018C MRP21P38175 177 aa2.4□□□□□ -2.03
SRD1YCR018C HIS2P38635 335 aa2.4□□□□□ -2.03
SRD1YCR018C VPS45P38932 577 aa2.4□□□□□ -2.03
SRD1YCR018C SOP4P39543 234 aaPredicted RBP2.4□□□□□ -2.03
SRD1YCR018C RRT13P40042 185 aa2.4□□□□□ -2.03
SRD1YCR018C EMC2P47133 292 aaKnown RBP2.4□□□□□ -2.03
SRD1YCR018C YGL185CP53100 379 aa2.4□□□□□ -2.03
SRD1YCR018C MND1P53102 219 aa2.4□□□□□ -2.03
SRD1YCR018C BIO4P53630 237 aa2.4□□□□□ -2.03
SRD1YCR018C SED5Q01590 340 aa2.4□□□□□ -2.03
SRD1YCR018C APC9Q12107 265 aa2.4□□□□□ -2.03
SRD1YCR018C YPL245WQ12179 454 aaKnown RBP2.4□□□□□ -2.03
SRD1YCR018C SWR1Q05471 1514 aa2.4□□□□□ -2.03
SRD1YCR018C DNA2P38859 1522 aa2.39□□□□□ -2.03
SRD1YCR018C ADH1P00330 348 aaKnown RBP2.39□□□□□ -2.03
SRD1YCR018C RIB7P33312 244 aa2.39□□□□□ -2.03
SRD1YCR018C YKL063CP35725 167 aa2.39□□□□□ -2.03
SRD1YCR018C YFL012WP43580 148 aa2.39□□□□□ -2.03
SRD1YCR018C PGU1P47180 361 aa2.39□□□□□ -2.03
SRD1YCR018C TPC1P53257 314 aa2.39□□□□□ -2.03
SRD1YCR018C INP1Q03694 420 aa2.39□□□□□ -2.03
SRD1YCR018C GPN3Q06543 272 aa2.39□□□□□ -2.03
SRD1YCR018C BER1Q06688 274 aaKnown RBP2.39□□□□□ -2.03
SRD1YCR018C ASR1Q06834 288 aa2.39□□□□□ -2.03
SRD1YCR018C YOL029CQ08187 201 aa2.39□□□□□ -2.03
SRD1YCR018C BI3Q9ZZW7 517 aa2.39□□□□□ -2.03
SRD1YCR018C SSA3P09435 649 aaKnown RBP2.38□□□□□ -2.03
SRD1YCR018C RPL31AP0C2H8 113 aaKnown RBP2.38□□□□□ -2.03
SRD1YCR018C IFM1P25038 676 aa2.38□□□□□ -2.03
SRD1YCR018C ZIP1P31111 875 aa2.38□□□□□ -2.03
SRD1YCR018C YKL187CP34231 750 aa2.38□□□□□ -2.03
SRD1YCR018C MCH2P36032 473 aa2.38□□□□□ -2.03
SRD1YCR018C RFT1P38206 574 aaPredicted RBP2.38□□□□□ -2.03
SRD1YCR018C RCK1P38622 512 aa2.38□□□□□ -2.03
SRD1YCR018C PET8P38921 284 aa2.38□□□□□ -2.03
SRD1YCR018C SEO1P39709 593 aa2.38□□□□□ -2.03
SRD1YCR018C YER184CP39961 794 aa2.38□□□□□ -2.03
SRD1YCR018C YIA6P40556 373 aa2.38□□□□□ -2.03
SRD1YCR018C AGP3P43548 558 aa2.38□□□□□ -2.03
SRD1YCR018C MRX5P47007 382 aa2.38□□□□□ -2.03
SRD1YCR018C SDS23P53172 527 aa2.38□□□□□ -2.03
SRD1YCR018C YGR018CP53211 109 aa2.38□□□□□ -2.03
SRD1YCR018C YPL077CQ02831 240 aa2.38□□□□□ -2.03
SRD1YCR018C INP2Q03824 705 aa2.38□□□□□ -2.03
SRD1YCR018C ECM11Q04110 302 aa2.38□□□□□ -2.03
SRD1YCR018C UTP15Q04305 513 aaKnown RBP2.38□□□□□ -2.03
SRD1YCR018C VIK1Q12045 647 aa2.38□□□□□ -2.03
SRD1YCR018C POM33Q12164 279 aa2.38□□□□□ -2.03
SRD1YCR018C RAX2Q12465 1220 aa2.38□□□□□ -2.03
SRD1YCR018C YPR064WQ12492 139 aa2.38□□□□□ -2.03
SRD1YCR018C FMP16Q12497 93 aa2.38□□□□□ -2.03
SRD1YCR018C LAG2Q92325 660 aa2.38□□□□□ -2.03
SRD1YCR018C TCB3Q03640 1545 aaKnown RBP2.37□□□□□ -2.03
SRD1YCR018C TDH3P00359 332 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SRD1YCR018C ILV1P00927 576 aaKnown RBP2.37□□□□□ -2.03
SRD1YCR018C RPS19AP07280 144 aaKnown RBP2.37□□□□□ -2.03
SRD1YCR018C RPS19BP07281 144 aaPredicted RBP2.37□□□□□ -2.03
SRD1YCR018C DAL5P15365 543 aa2.37□□□□□ -2.03
SRD1YCR018C YSR3P23501 404 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms