RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDS1	YBR029C	DSE1	P40077	573 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	YER186C	P40101	306 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	AIM23	P47015	356 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	COX16	P47081	118 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	YGL185C	P53100	379 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	MKC7	P53379	596 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	YNL260C	P53846	198 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	YET2	Q04210	160 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	PBP4	Q07362	185 aa	Known RBP	4.78	□□□□□ -1.64
CDS1	YBR029C	TLG2	Q08144	397 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	SIA1	Q12212	622 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	NUP188	P52593	1655 aa	Known RBP	4.77	□□□□□ -1.65
CDS1	YBR029C	IML1	P47170	1584 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	MEK1	P24719	497 aa	Predicted RBP	4.77	□□□□□ -1.65
CDS1	YBR029C	ZRT1	P32804	376 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	RCK2	P38623	610 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	SMF2	P38778	549 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	MIG3	P39943	394 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	YNL050C	P53952	270 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	SKI8	Q02793	397 aa	Predicted RBP	4.77	□□□□□ -1.65
CDS1	YBR029C	YMR027W	Q04371	470 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	LIP2	Q06005	328 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	BCP1	Q06338	283 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	YPQ1	Q12010	308 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	SFM1	Q12314	213 aa		4.77	□□□□□ -1.65
CDS1	YBR029C	STE7	P06784	515 aa		4.76	□□□□□ -1.65
CDS1	YBR029C	SSA3	P09435	649 aa	Known RBP	4.76	□□□□□ -1.65
CDS1	YBR029C	CTA1	P15202	515 aa		4.76	□□□□□ -1.65
CDS1	YBR029C	ECT1	P33412	323 aa		4.76	□□□□□ -1.65
CDS1	YBR029C	MOB2	P43563	287 aa		4.76	□□□□□ -1.65
CDS1	YBR029C	KEL2	P50090	882 aa		4.76	□□□□□ -1.65
CDS1	YBR029C	SLT2	Q00772	484 aa		4.76	□□□□□ -1.65
CDS1	YBR029C	YPL080C	Q02826	108 aa		4.76	□□□□□ -1.65
CDS1	YBR029C	ATP16	Q12165	160 aa		4.76	□□□□□ -1.65
CDS1	YBR029C	WTM1	Q12363	437 aa	Known RBP	4.76	□□□□□ -1.65
CDS1	YBR029C	MRPL37	P36532	105 aa		4.75	□□□□□ -1.65
CDS1	YBR029C	SWD3	P38123	315 aa		4.75	□□□□□ -1.65
CDS1	YBR029C	OKP1	P53298	406 aa		4.75	□□□□□ -1.65
CDS1	YBR029C	PAL1	Q05518	499 aa	Known RBP	4.75	□□□□□ -1.65
CDS1	YBR029C	SLM3	Q12093	417 aa		4.75	□□□□□ -1.65
CDS1	YBR029C	HRT3	Q12347	344 aa		4.75	□□□□□ -1.65
CDS1	YBR029C	RPN6	Q12377	434 aa		4.75	□□□□□ -1.65
CDS1	YBR029C	GPI12	P23797	304 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	CDC50	P25656	391 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	URA10	P30402	227 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	PMT2	P31382	759 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	DEP1	P31385	405 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	KTI12	P34253	313 aa	Known RBP	4.74	□□□□□ -1.65
CDS1	YBR029C	SWD2	P36104	329 aa	Predicted RBP	4.74	□□□□□ -1.65
CDS1	YBR029C	WSC4	P38739	605 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	YHR035W	P38769	630 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	PFS1	P38872	237 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	BAT1	P38891	393 aa	Known RBP	4.74	□□□□□ -1.65
CDS1	YBR029C	UTP18	P40362	594 aa	Predicted RBP	4.74	□□□□□ -1.65
CDS1	YBR029C	YGR266W	P53326	701 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	SUR7	P54003	302 aa		4.74	□□□□□ -1.65
CDS1	YBR029C	PRP38	Q00723	242 aa	Predicted RBP	4.74	□□□□□ -1.65
CDS1	YBR029C	RPS14A	P06367	137 aa	Known RBP	4.73	□□□□□ -1.65
CDS1	YBR029C	SOL2	P37262	315 aa		4.73	□□□□□ -1.65
CDS1	YBR029C	DTR1	P38125	572 aa		4.73	□□□□□ -1.65
CDS1	YBR029C	RPS14B	P39516	138 aa	Known RBP	4.73	□□□□□ -1.65
CDS1	YBR029C	SEH1	P53011	349 aa	Known RBP	4.73	□□□□□ -1.65
CDS1	YBR029C	MCT1	Q12283	360 aa		4.73	□□□□□ -1.65
CDS1	YBR029C	ERP3	Q12403	225 aa		4.73	□□□□□ -1.65
CDS1	YBR029C	FMP16	Q12497	93 aa		4.73	□□□□□ -1.65
CDS1	YBR029C	PDR11	P40550	1411 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	UNG1	P12887	359 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	NUP2	P32499	720 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	YUH1	P35127	236 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	YKL071W	P36086	256 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	HIS2	P38635	335 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	TDA11	P38854	504 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	GAB1	P41733	394 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	MPP6	P53725	186 aa	Predicted RBP	4.72	□□□□□ -1.65
CDS1	YBR029C	VAC7	P53950	1165 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	IZH4	Q99393	312 aa		4.72	□□□□□ -1.65
CDS1	YBR029C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.71	□□□□□ -1.65
CDS1	YBR029C	REP1	P03871	373 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	ZRC1	P20107	442 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	YBR241C	P38142	488 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	OM14	P38325	134 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	TIM17	P39515	158 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	PEX22	P39718	180 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	BIO4	P53630	237 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	ENT5	Q03769	411 aa	Known RBP	4.71	□□□□□ -1.66
CDS1	YBR029C	CSI1	Q04368	295 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	KAP95	Q06142	861 aa	Known RBP	4.71	□□□□□ -1.66
CDS1	YBR029C	YLR177W	Q06251	628 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	RDL2	Q08742	149 aa	Known RBP	4.71	□□□□□ -1.66
CDS1	YBR029C	RSA1	Q08932	381 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	TAF10	Q12030	206 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	LDB17	Q12342	491 aa		4.71	□□□□□ -1.66
CDS1	YBR029C	ERD1	P16151	362 aa		4.7	□□□□□ -1.66
CDS1	YBR029C	CMK2	P22517	447 aa		4.7	□□□□□ -1.66
CDS1	YBR029C	CTM1	P38818	585 aa		4.7	□□□□□ -1.66
CDS1	YBR029C	HEM14	P40012	539 aa		4.7	□□□□□ -1.66
CDS1	YBR029C	YFL040W	P43562	540 aa		4.7	□□□□□ -1.66
CDS1	YBR029C	CDH1	P53197	566 aa		4.7	□□□□□ -1.66
CDS1	YBR029C	SNX41	Q04053	625 aa		4.7	□□□□□ -1.66
CDS1	YBR029C	YLR012C	Q07927	99 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 788.4 ms