RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 MPA43P53583 542 aaPredicted RBP-1.18□□□□□ -2.6
snR47snR47 OSH6Q02201 448 aa-1.18□□□□□ -2.6
snR47snR47 PRP3Q03338 469 aaPredicted RBP-1.18□□□□□ -2.6
snR47snR47 RPN9Q04062 393 aaKnown RBP-1.18□□□□□ -2.6
snR47snR47 YLH47Q06493 454 aa-1.18□□□□□ -2.6
snR47snR47 TPK3P05986 398 aa-1.19□□□□□ -2.6
snR47snR47 MDH2P22133 377 aa-1.19□□□□□ -2.6
snR47snR47 YKL187CP34231 750 aa-1.19□□□□□ -2.6
snR47snR47 EDC2P40023 145 aaPredicted RBP-1.19□□□□□ -2.6
snR47snR47 YER079WP40052 210 aaKnown RBP-1.19□□□□□ -2.6
snR47snR47 DSE1P40077 573 aa-1.19□□□□□ -2.6
snR47snR47 SVL3Q03088 825 aaKnown RBP-1.19□□□□□ -2.6
snR47snR47 TRM82Q03774 444 aa-1.19□□□□□ -2.6
snR47snR47 FCF1Q05498 189 aaPredicted RBP-1.19□□□□□ -2.6
snR47snR47 GAT3Q07928 141 aa-1.19□□□□□ -2.6
snR47snR47 PUT1P09368 476 aa-1.2□□□□□ -2.6
snR47snR47 DSF1P0CX08 502 aa-1.2□□□□□ -2.6
snR47snR47 YNR073CP0CX09 502 aa-1.2□□□□□ -2.6
snR47snR47 VPS1P21576 704 aaKnown RBP-1.2□□□□□ -2.6
snR47snR47 CDC13P32797 924 aaKnown RBP-1.2□□□□□ -2.6
snR47snR47 MPE1P35728 441 aaKnown RBP-1.2□□□□□ -2.6
snR47snR47 AVT2P39981 480 aa-1.2□□□□□ -2.6
snR47snR47 ATM1P40416 690 aa-1.2□□□□□ -2.6
snR47snR47 CAK1P43568 368 aaPredicted RBP-1.2□□□□□ -2.6
snR47snR47 COS5P47187 383 aa-1.2□□□□□ -2.6
snR47snR47 MPS2P53159 387 aa-1.2□□□□□ -2.6
snR47snR47 DOS2P54858 310 aa-1.2□□□□□ -2.6
snR47snR47 STE23Q06010 1027 aa-1.2□□□□□ -2.6
snR47snR47 VTA1Q06263 330 aa-1.2□□□□□ -2.6
snR47snR47 COS7Q07788 383 aa-1.2□□□□□ -2.6
snR47snR47 NSE1Q07913 336 aa-1.2□□□□□ -2.6
snR47snR47 LCL2Q08045 131 aa-1.2□□□□□ -2.6
snR47snR47 RUP1Q12242 671 aa-1.2□□□□□ -2.6
snR47snR47 AQY2P0CD90 149 aa-1.21□□□□□ -2.6
snR47snR47 CAT2P32796 670 aaKnown RBP-1.21□□□□□ -2.6
snR47snR47 MET18P40469 1032 aa-1.21□□□□□ -2.6
snR47snR47 PAC11P40960 533 aa-1.21□□□□□ -2.6
snR47snR47 RSM27P53305 110 aa-1.21□□□□□ -2.6
snR47snR47 UBC7Q02159 165 aa-1.21□□□□□ -2.6
snR47snR47 RRP45Q05636 305 aaKnown RBP-1.21□□□□□ -2.6
snR47snR47 DIS3Q08162 1001 aaKnown RBP-1.21□□□□□ -2.6
snR47snR47 BYE1P36106 594 aa-1.22□□□□□ -2.6
snR47snR47 NOP4P37838 685 aaKnown RBP-1.22□□□□□ -2.6
snR47snR47 BMT5P40493 336 aa-1.22□□□□□ -2.6
snR47snR47 RMD8P43620 662 aa-1.22□□□□□ -2.6
snR47snR47 VPS75P53853 264 aa-1.22□□□□□ -2.6
snR47snR47 JJJ1P53863 590 aa-1.22□□□□□ -2.6
snR47snR47 ISA2Q12425 185 aa-1.22□□□□□ -2.6
snR47snR47 SCM4P32564 187 aa-1.23□□□□□ -2.61
snR47snR47 SIF2P38262 535 aa-1.23□□□□□ -2.61
snR47snR47 VTC1P40046 129 aaRIP-Chip data-1.23□□□□□ -2.61not detected
snR47snR47 OST3P48439 350 aa-1.23□□□□□ -2.61
snR47snR47 PRP42Q03776 544 aaKnown RBP-1.23□□□□□ -2.61
snR47snR47 RNH203Q12338 110 aa-1.23□□□□□ -2.61
snR47snR47 RPL12AP0CX53 165 aaKnown RBP-1.24□□□□□ -2.61
snR47snR47 RPL12BP0CX54 165 aa-1.24□□□□□ -2.61
snR47snR47 GPA2P10823 449 aa-1.24□□□□□ -2.61
snR47snR47 ARF1P11076 181 aaKnown RBP-1.24□□□□□ -2.61
snR47snR47 RPL3P14126 387 aaKnown RBP-1.24□□□□□ -2.61
snR47snR47 FBA1P14540 359 aaKnown RBP-1.24□□□□□ -2.61
snR47snR47 IMP2'P32351 346 aa-1.24□□□□□ -2.61
snR47snR47 PTH2P34222 208 aa-1.24□□□□□ -2.61
snR47snR47 DOA1P36037 715 aa-1.24□□□□□ -2.61
snR47snR47 MUD2P36084 527 aaKnown RBP-1.24□□□□□ -2.61
snR47snR47 TPC1P53257 314 aa-1.24□□□□□ -2.61
snR47snR47 CIK1Q01649 594 aa-1.24□□□□□ -2.61
snR47snR47 RRB1Q04225 511 aaKnown RBP-1.24□□□□□ -2.61
snR47snR47 TAF10Q12030 206 aa-1.24□□□□□ -2.61
snR47snR47 SEM1O94742 89 aa-1.25□□□□□ -2.61
snR47snR47 SCL1P21243 252 aaKnown RBP-1.25□□□□□ -2.61
snR47snR47 OCA4P25366 362 aa-1.25□□□□□ -2.61
snR47snR47 VPH2P32341 215 aa-1.25□□□□□ -2.61
snR47snR47 PEX5P35056 612 aa-1.25□□□□□ -2.61
snR47snR47 ZTA1P38230 334 aaKnown RBP-1.25□□□□□ -2.61
snR47snR47 NTC20P38302 140 aaPredicted RBP-1.25□□□□□ -2.61
snR47snR47 SRP72P38688 640 aaKnown RBP-1.25□□□□□ -2.61
snR47snR47 STN1P38960 494 aa-1.25□□□□□ -2.61
snR47snR47 YHB1P39676 399 aaKnown RBP-1.25□□□□□ -2.61
snR47snR47 TIF34P40217 347 aaKnown RBP-1.25□□□□□ -2.61
snR47snR47 DON1Q05610 365 aa-1.25□□□□□ -2.61
snR47snR47 CDC21P06785 304 aa-1.26□□□□□ -2.61
snR47snR47 GFD2P25370 566 aaKnown RBP-1.26□□□□□ -2.61
snR47snR47 GPI10P30777 616 aa-1.26□□□□□ -2.61
snR47snR47 INM1P38710 295 aa-1.26□□□□□ -2.61
snR47snR47 SYS1P41544 203 aa-1.26□□□□□ -2.61
snR47snR47 PMT4P46971 762 aa-1.26□□□□□ -2.61
snR47snR47 MNP1P53163 194 aaPredicted RBP-1.26□□□□□ -2.61
snR47snR47 OCA2P53949 197 aa-1.26□□□□□ -2.61
snR47snR47 CTR3Q06686 241 aa-1.26□□□□□ -2.61
snR47snR47 SCM3Q12334 223 aa-1.26□□□□□ -2.61
snR47snR47 OPI3P05375 206 aa-1.27□□□□□ -2.61
snR47snR47 RNA1P11745 407 aaKnown RBP-1.27□□□□□ -2.61
snR47snR47 RRP7P25368 297 aaPredicted RBP-1.27□□□□□ -2.61
snR47snR47 OTU2P38747 307 aaKnown RBP-1.27□□□□□ -2.61
snR47snR47 YGL138CP53122 345 aa-1.27□□□□□ -2.61
snR47snR47 BUD25P85052 153 aa-1.27□□□□□ -2.61
snR47snR47 SKO1Q02100 647 aa-1.27□□□□□ -2.61
snR47snR47 ERO1Q03103 563 aa-1.27□□□□□ -2.61
snR47snR47 GLE1Q12315 538 aa-1.27□□□□□ -2.61
snR47snR47 UBA3Q99344 299 aa-1.27□□□□□ -2.61
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms