RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C GRX3Q03835 250 aa7.58□□□□□ -1.2
SRP54YPR088C PLM2Q04383 521 aa7.58□□□□□ -1.2
SRP54YPR088C DCR2Q05924 578 aa7.58□□□□□ -1.2
SRP54YPR088C SEI1Q06058 285 aa7.58□□□□□ -1.2
SRP54YPR088C MDM36Q06820 579 aa7.58□□□□□ -1.2
SRP54YPR088C ENB1Q08299 606 aa7.58□□□□□ -1.2
SRP54YPR088C AKR2Q12013 749 aa7.58□□□□□ -1.2
SRP54YPR088C YDL109CQ12103 647 aa7.58□□□□□ -1.2
SRP54YPR088C FRE7Q12333 620 aa7.58□□□□□ -1.2
SRP54YPR088C RAS1P01119 309 aa7.57□□□□□ -1.2
SRP54YPR088C HSP150P32478 413 aa7.57□□□□□ -1.2
SRP54YPR088C ZUO1P32527 433 aaKnown RBP7.57□□□□□ -1.2
SRP54YPR088C YEF1P32622 495 aa7.57□□□□□ -1.2
SRP54YPR088C TRS65P32893 560 aa7.57□□□□□ -1.2
SRP54YPR088C NIC96P34077 839 aa7.57□□□□□ -1.2
SRP54YPR088C YKL071WP36086 256 aa7.57□□□□□ -1.2
SRP54YPR088C MTC4P38335 694 aaKnown RBP7.57□□□□□ -1.2
SRP54YPR088C NAB3P38996 802 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
SRP54YPR088C IRC6P43615 237 aa7.57□□□□□ -1.2
SRP54YPR088C VPS73P53142 486 aaKnown RBP7.57□□□□□ -1.2
SRP54YPR088C BUD9P53226 547 aa7.57□□□□□ -1.2
SRP54YPR088C CUZ1P53899 274 aa7.57□□□□□ -1.2
SRP54YPR088C YPS7Q06325 596 aa7.57□□□□□ -1.2
SRP54YPR088C YDL114WQ07530 308 aa7.57□□□□□ -1.2
SRP54YPR088C MSH5Q12175 901 aa7.57□□□□□ -1.2
SRP54YPR088C YGR161W-CQ3E744 92 aa7.57□□□□□ -1.2
SRP54YPR088C RIP1P08067 215 aa7.56□□□□□ -1.2
SRP54YPR088C PRE2P30656 287 aaKnown RBP7.56□□□□□ -1.2
SRP54YPR088C SLC1P33333 303 aa7.56□□□□□ -1.2
SRP54YPR088C HIS7P33734 552 aaKnown RBP7.56□□□□□ -1.2
SRP54YPR088C RPP1P38786 293 aa7.56□□□□□ -1.2
SRP54YPR088C NVJ1P38881 321 aa7.56□□□□□ -1.2
SRP54YPR088C YNL208WP40159 199 aaKnown RBP7.56□□□□□ -1.2
SRP54YPR088C JLP2P40206 208 aa7.56□□□□□ -1.2
SRP54YPR088C OCA1P50946 238 aaPredicted RBP7.56□□□□□ -1.2
SRP54YPR088C MGR3Q04472 501 aa7.56□□□□□ -1.2
SRP54YPR088C MDM30Q05930 598 aa7.56□□□□□ -1.2
SRP54YPR088C YLR173WQ06247 608 aa7.56□□□□□ -1.2
SRP54YPR088C HDA2Q06629 674 aa7.56□□□□□ -1.2
SRP54YPR088C CYK3Q07533 885 aa7.56□□□□□ -1.2
SRP54YPR088C YOR238WQ08634 303 aa7.56□□□□□ -1.2
SRP54YPR088C HSP42Q12329 375 aa7.56□□□□□ -1.2
SRP54YPR088C IES3Q12345 250 aa7.56□□□□□ -1.2
SRP54YPR088C SEC12P11655 471 aa7.56□□□□□ -1.2
SRP54YPR088C NUP1P20676 1076 aa7.56□□□□□ -1.2
SRP54YPR088C MSN4P33749 630 aa7.56□□□□□ -1.2
SRP54YPR088C TPO5P36029 618 aa7.56□□□□□ -1.2
SRP54YPR088C SHE1P38200 338 aa7.56□□□□□ -1.2
SRP54YPR088C PCL6P40038 420 aa7.56□□□□□ -1.2
SRP54YPR088C YFR054CP43622 192 aa7.56□□□□□ -1.2
SRP54YPR088C SAM37P50110 327 aa7.56□□□□□ -1.2
SRP54YPR088C COQ10Q08058 207 aa7.56□□□□□ -1.2
SRP54YPR088C YOR376WQ08900 122 aa7.56□□□□□ -1.2
SRP54YPR088C RPL24BP24000 155 aaKnown RBP7.55□□□□□ -1.2
SRP54YPR088C ARO7P32178 256 aa7.55□□□□□ -1.2
SRP54YPR088C YHR180WP38868 163 aa7.55□□□□□ -1.2
SRP54YPR088C RRN9P53437 365 aa7.55□□□□□ -1.2
SRP54YPR088C MPP6P53725 186 aaPredicted RBP7.55□□□□□ -1.2
SRP54YPR088C YMR315WQ04869 349 aaKnown RBP7.55□□□□□ -1.2
SRP54YPR088C DFG5Q05031 458 aa7.55□□□□□ -1.2
SRP54YPR088C UTP21Q06078 939 aaPredicted RBP7.55□□□□□ -1.2
SRP54YPR088C HNT3Q08702 217 aa7.55□□□□□ -1.2
SRP54YPR088C RKM1Q08961 583 aaPredicted RBP7.55□□□□□ -1.2
SRP54YPR088C THP3Q12049 470 aaKnown RBP7.55□□□□□ -1.2
SRP54YPR088C SET6Q12529 373 aa7.55□□□□□ -1.2
SRP54YPR088C GLT1Q12680 2145 aaKnown RBP7.55□□□□□ -1.2
SRP54YPR088C FPS1P23900 669 aa7.54□□□□□ -1.2
SRP54YPR088C GIT1P25346 518 aa7.54□□□□□ -1.2
SRP54YPR088C FET3P38993 636 aa7.54□□□□□ -1.2
SRP54YPR088C HIS6P40545 261 aa7.54□□□□□ -1.2
SRP54YPR088C VNX1P42839 908 aa7.54□□□□□ -1.2
SRP54YPR088C SCW11P53189 542 aa7.54□□□□□ -1.2
SRP54YPR088C OGG1P53397 376 aaPredicted RBP7.54□□□□□ -1.2
SRP54YPR088C NOG1Q02892 647 aaKnown RBP7.54□□□□□ -1.2
SRP54YPR088C CGI121Q03705 181 aaKnown RBP7.54□□□□□ -1.2
SRP54YPR088C RCF1Q03713 159 aa7.54□□□□□ -1.2
SRP54YPR088C YDR249CQ03787 373 aa7.54□□□□□ -1.2
SRP54YPR088C BUR2Q05949 395 aa7.54□□□□□ -1.2
SRP54YPR088C RLM1Q12224 676 aa7.54□□□□□ -1.2
SRP54YPR088C YGL041W-AP0C5N3 154 aa7.53□□□□□ -1.2
SRP54YPR088C YCL002CP25565 263 aa7.53□□□□□ -1.2
SRP54YPR088C ECT1P33412 323 aa7.53□□□□□ -1.2
SRP54YPR088C SEF1P34228 1148 aa7.53□□□□□ -1.2
SRP54YPR088C MTC2P34246 357 aa7.53□□□□□ -1.2
SRP54YPR088C YKR073CP36153 106 aa7.53□□□□□ -1.2
SRP54YPR088C MRPL16P38064 232 aa7.53□□□□□ -1.2
SRP54YPR088C GPX2P38143 162 aa7.53□□□□□ -1.2
SRP54YPR088C FMC1P40491 155 aa7.53□□□□□ -1.2
SRP54YPR088C PFS2P42841 465 aaKnown RBP7.53□□□□□ -1.2
SRP54YPR088C YAE1P47118 141 aaPredicted RBP7.53□□□□□ -1.2
SRP54YPR088C ECL1P48235 211 aa7.53□□□□□ -1.2
SRP54YPR088C MRPL1Q04599 285 aa7.53□□□□□ -1.2
SRP54YPR088C SOG2Q08817 791 aa7.53□□□□□ -1.2
SRP54YPR088C RDR1Q08904 546 aa7.53□□□□□ -1.2
SRP54YPR088C BTS1Q12051 335 aa7.53□□□□□ -1.2
SRP54YPR088C DCP1Q12517 231 aaPredicted RBP7.53□□□□□ -1.2
SRP54YPR088C YOR032W-AQ8TGS1 66 aa7.53□□□□□ -1.2
SRP54YPR088C CYT1P07143 309 aa7.52□□□□□ -1.2
SRP54YPR088C EHD3P28817 500 aa7.52□□□□□ -1.2
SRP54YPR088C MDH3P32419 343 aaKnown RBP RIP-Chip data7.52□□□□□ -1.2not detected
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms