RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE5YOR042W PTP2P29461 750 aa4.5□□□□□ -1.69
CUE5YOR042W MRPL6P32904 214 aa4.5□□□□□ -1.69
CUE5YOR042W VPS52P39904 641 aa4.5□□□□□ -1.69
CUE5YOR042W YRB2P40517 327 aa4.5□□□□□ -1.69
CUE5YOR042W SNM1P40993 198 aa4.5□□□□□ -1.69
CUE5YOR042W FAR7P43592 221 aa4.5□□□□□ -1.69
CUE5YOR042W APS3P47064 194 aa4.5□□□□□ -1.69
CUE5YOR042W LCL3P53153 274 aa4.5□□□□□ -1.69
CUE5YOR042W DCP2P53550 970 aaKnown RBP4.5□□□□□ -1.69
CUE5YOR042W TPS1Q00764 495 aaKnown RBP4.5□□□□□ -1.69
CUE5YOR042W SWP1Q02795 286 aa4.5□□□□□ -1.69
CUE5YOR042W YPL107WQ02873 248 aa4.5□□□□□ -1.69
CUE5YOR042W GCN1P33892 2672 aaKnown RBP4.49□□□□□ -1.69
CUE5YOR042W RPL20AP0CX23 172 aaKnown RBP4.49□□□□□ -1.69
CUE5YOR042W RPL20BP0CX24 172 aaPredicted RBP4.49□□□□□ -1.69
CUE5YOR042W FAR1P21268 830 aa4.49□□□□□ -1.69
CUE5YOR042W YCK1P23291 538 aa4.49□□□□□ -1.69
CUE5YOR042W FEN2P25621 512 aaKnown RBP4.49□□□□□ -1.69
CUE5YOR042W CYS4P32582 507 aaKnown RBP4.49□□□□□ -1.69
CUE5YOR042W ECM34P38728 170 aa4.49□□□□□ -1.69
CUE5YOR042W ANS1P38832 159 aa4.49□□□□□ -1.69
CUE5YOR042W SPO73P40031 143 aa4.49□□□□□ -1.69
CUE5YOR042W COG3P40094 801 aa4.49□□□□□ -1.69
CUE5YOR042W PRE6P40303 254 aaKnown RBP4.49□□□□□ -1.69
CUE5YOR042W GVP36P40531 326 aaKnown RBP4.49□□□□□ -1.69
CUE5YOR042W BUD8P41698 603 aa4.49□□□□□ -1.69
CUE5YOR042W SNO3P43544 222 aa4.49□□□□□ -1.69
CUE5YOR042W BNA3P47039 444 aaKnown RBP4.49□□□□□ -1.69
CUE5YOR042W TOS2P50078 622 aa4.49□□□□□ -1.69
CUE5YOR042W PRM8P53174 237 aa4.49□□□□□ -1.69
CUE5YOR042W YPL068CQ02749 293 aa4.49□□□□□ -1.69
CUE5YOR042W PEX25Q02969 394 aa4.49□□□□□ -1.69
CUE5YOR042W INP1Q03694 420 aa4.49□□□□□ -1.69
CUE5YOR042W STP4Q07351 490 aa4.49□□□□□ -1.69
CUE5YOR042W NFI1Q12216 726 aa4.49□□□□□ -1.69
CUE5YOR042W YOR214CQ12282 236 aa4.49□□□□□ -1.69
CUE5YOR042W YLR126CQ12288 251 aa4.49□□□□□ -1.69
CUE5YOR042W PSF1Q12488 208 aa4.49□□□□□ -1.69
CUE5YOR042W BAR1P12630 587 aa4.48□□□□□ -1.69
CUE5YOR042W KSS1P14681 368 aa4.48□□□□□ -1.69
CUE5YOR042W PRP28P23394 588 aa4.48□□□□□ -1.69
CUE5YOR042W RHB1P25378 209 aa4.48□□□□□ -1.69
CUE5YOR042W PBN1P25580 416 aa4.48□□□□□ -1.69
CUE5YOR042W SAC1P32368 623 aaKnown RBP4.48□□□□□ -1.69
CUE5YOR042W EMP70P32802 667 aa4.48□□□□□ -1.69
CUE5YOR042W ECM8P38246 354 aa4.48□□□□□ -1.69
CUE5YOR042W EXO84P38261 753 aa4.48□□□□□ -1.69
CUE5YOR042W IFA38P38286 347 aa4.48□□□□□ -1.69
CUE5YOR042W YHR097CP38809 366 aaKnown RBP4.48□□□□□ -1.69
CUE5YOR042W YIL077CP40508 320 aa4.48□□□□□ -1.69
CUE5YOR042W SMK1P41808 388 aa4.48□□□□□ -1.69
CUE5YOR042W NIT2P47016 307 aa4.48□□□□□ -1.69
CUE5YOR042W NUP57P48837 541 aa4.48□□□□□ -1.69
CUE5YOR042W IMD4P50094 524 aaKnown RBP4.48□□□□□ -1.69
CUE5YOR042W MPC1P53157 130 aaKnown RBP4.48□□□□□ -1.69
CUE5YOR042W MEP3P53390 489 aa4.48□□□□□ -1.69
CUE5YOR042W MPA43P53583 542 aaPredicted RBP4.48□□□□□ -1.69
CUE5YOR042W YDR541CQ03049 344 aa4.48□□□□□ -1.69
CUE5YOR042W YMR099CQ03161 297 aaKnown RBP4.48□□□□□ -1.69
CUE5YOR042W RSM10Q03201 203 aa4.48□□□□□ -1.69
CUE5YOR042W RNH202Q05635 350 aa4.48□□□□□ -1.69
CUE5YOR042W ARV1Q06541 321 aa4.48□□□□□ -1.69
CUE5YOR042W REX3Q12090 404 aa4.48□□□□□ -1.69
CUE5YOR042W YDL211CQ12121 372 aa4.48□□□□□ -1.69
CUE5YOR042W FRE7Q12333 620 aa4.48□□□□□ -1.69
CUE5YOR042W RIB3Q99258 208 aa4.48□□□□□ -1.69
CUE5YOR042W RPC40P07703 335 aaKnown RBP4.47□□□□□ -1.69
CUE5YOR042W YOL163WP0CF20 169 aa4.47□□□□□ -1.69
CUE5YOR042W KGD1P20967 1014 aaKnown RBP4.47□□□□□ -1.69
CUE5YOR042W RRP7P25368 297 aaPredicted RBP4.47□□□□□ -1.69
CUE5YOR042W SSE2P32590 693 aaKnown RBP4.47□□□□□ -1.69
CUE5YOR042W ORC2P32833 620 aa4.47□□□□□ -1.69
CUE5YOR042W YBR285WP38354 144 aa4.47□□□□□ -1.69
CUE5YOR042W PDS1P40316 373 aaPredicted RBP4.47□□□□□ -1.69
CUE5YOR042W CUP9P41817 306 aa4.47□□□□□ -1.69
CUE5YOR042W MDV1P47025 714 aa4.47□□□□□ -1.69
CUE5YOR042W TAF4P50105 388 aa4.47□□□□□ -1.69
CUE5YOR042W YGR168CP53293 376 aa4.47□□□□□ -1.69
CUE5YOR042W DBP6P53734 629 aaKnown RBP4.47□□□□□ -1.69
CUE5YOR042W YLR460CP54007 376 aa4.47□□□□□ -1.69
CUE5YOR042W SMX3P54999 86 aaPredicted RBP4.47□□□□□ -1.69
CUE5YOR042W NCE101Q02820 53 aa4.47□□□□□ -1.69
CUE5YOR042W SMP3Q04174 516 aa4.47□□□□□ -1.69
CUE5YOR042W ENT2Q05785 613 aa4.47□□□□□ -1.69
CUE5YOR042W SEI1Q06058 285 aa4.47□□□□□ -1.69
CUE5YOR042W SKI7Q08491 747 aaPredicted RBP4.47□□□□□ -1.69
CUE5YOR042W AKR2Q12013 749 aa4.47□□□□□ -1.69
CUE5YOR042W USV1Q12132 391 aa4.47□□□□□ -1.69
CUE5YOR042W TPO4Q12256 659 aa4.47□□□□□ -1.69
CUE5YOR042W PRP46Q12417 451 aaPredicted RBP4.47□□□□□ -1.69
CUE5YOR042W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69 RIP-Chip
CUE5YOR042W YPT1P01123 206 aaKnown RBP4.46□□□□□ -1.7
CUE5YOR042W LDB16P25587 256 aa4.46□□□□□ -1.7
CUE5YOR042W ITR2P30606 609 aa4.46□□□□□ -1.7
CUE5YOR042W ASF2P32448 525 aaPredicted RBP4.46□□□□□ -1.7
CUE5YOR042W HIR2P32480 875 aa4.46□□□□□ -1.7
CUE5YOR042W TIF3P34167 436 aaKnown RBP4.46□□□□□ -1.7
CUE5YOR042W LHS1P36016 881 aa4.46□□□□□ -1.7
CUE5YOR042W YBR139WP38109 508 aa4.46□□□□□ -1.7
CUE5YOR042W YEL068CP39977 110 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms