RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W PRY1P47032 299 aa3.54□□□□□ -1.84
ECM16YMR128W ECM27P47144 725 aa3.54□□□□□ -1.84
ECM16YMR128W YGR015CP53208 328 aa3.54□□□□□ -1.84
ECM16YMR128W YGR026WP53217 278 aa3.54□□□□□ -1.84
ECM16YMR128W POP6P53218 158 aa3.54□□□□□ -1.84
ECM16YMR128W GSF2Q04697 403 aaKnown RBP3.54□□□□□ -1.84
ECM16YMR128W ELP6Q04868 273 aa3.54□□□□□ -1.84
ECM16YMR128W VID22Q05934 901 aa3.54□□□□□ -1.84
ECM16YMR128W YLR012CQ07927 99 aa3.54□□□□□ -1.84
ECM16YMR128W YLR031WQ07978 186 aa3.54□□□□□ -1.84
ECM16YMR128W SKI7Q08491 747 aaPredicted RBP3.54□□□□□ -1.84
ECM16YMR128W YLR099W-AQ3E798 87 aa3.54□□□□□ -1.84
ECM16YMR128W MNE1P24720 663 aa3.54□□□□□ -1.84
ECM16YMR128W RNA14P25298 677 aaKnown RBP3.54□□□□□ -1.84
ECM16YMR128W NFS1P25374 497 aa3.54□□□□□ -1.84
ECM16YMR128W SFA1P32771 386 aa3.54□□□□□ -1.84
ECM16YMR128W VAM7P32912 316 aa3.54□□□□□ -1.84
ECM16YMR128W SRO77P38163 1010 aa3.54□□□□□ -1.84
ECM16YMR128W UBA4P38820 440 aa3.54□□□□□ -1.84
ECM16YMR128W PFS2P42841 465 aaKnown RBP3.54□□□□□ -1.84
ECM16YMR128W BUL1P48524 976 aa3.54□□□□□ -1.84
ECM16YMR128W SPT20P50875 604 aa3.54□□□□□ -1.84
ECM16YMR128W OCA1P50946 238 aaPredicted RBP3.54□□□□□ -1.84
ECM16YMR128W IPI3P53877 555 aa3.54□□□□□ -1.84
ECM16YMR128W TRM82Q03774 444 aa3.54□□□□□ -1.84
ECM16YMR128W AIM36Q03798 255 aa3.54□□□□□ -1.84
ECM16YMR128W SNX41Q04053 625 aa3.54□□□□□ -1.84
ECM16YMR128W YLR352WQ06479 807 aa3.54□□□□□ -1.84
ECM16YMR128W YEH1Q07804 573 aa3.54□□□□□ -1.84
ECM16YMR128W FRE3Q08905 711 aa3.54□□□□□ -1.84
ECM16YMR128W FEX1Q08913 375 aa3.54□□□□□ -1.84
ECM16YMR128W GUP2Q08929 609 aa3.54□□□□□ -1.84
ECM16YMR128W FEX2Q08991 375 aa3.54□□□□□ -1.84
ECM16YMR128W TRM8Q12009 286 aa3.54□□□□□ -1.84
ECM16YMR128W RTK1Q12100 620 aaPredicted RBP3.54□□□□□ -1.84
ECM16YMR128W YDL177CQ12257 170 aa3.54□□□□□ -1.84
ECM16YMR128W YOL114CQ12322 202 aa3.54□□□□□ -1.84
ECM16YMR128W RKM5Q12367 367 aa3.54□□□□□ -1.84
ECM16YMR128W YHR213W-AQ8TGT4 77 aa3.54□□□□□ -1.84
ECM16YMR128W YBR085C-AO43137 85 aa3.53□□□□□ -1.84
ECM16YMR128W RPP1AP05318 106 aaPredicted RBP3.53□□□□□ -1.84
ECM16YMR128W MRP2P10663 115 aaPredicted RBP3.53□□□□□ -1.84
ECM16YMR128W ADK2P26364 225 aa3.53□□□□□ -1.84
ECM16YMR128W FAU1P40099 211 aa3.53□□□□□ -1.84
ECM16YMR128W PKP1P40530 394 aa3.53□□□□□ -1.84
ECM16YMR128W HXT9P40885 567 aa3.53□□□□□ -1.84
ECM16YMR128W SSN8P47821 323 aa3.53□□□□□ -1.84
ECM16YMR128W UBC12P52491 188 aa3.53□□□□□ -1.84
ECM16YMR128W BSC5P53755 489 aa3.53□□□□□ -1.84
ECM16YMR128W COS1P53822 381 aa3.53□□□□□ -1.84
ECM16YMR128W MTQ1P53944 314 aa3.53□□□□□ -1.84
ECM16YMR128W OST6Q03723 332 aa3.53□□□□□ -1.84
ECM16YMR128W RIM13Q03792 727 aa3.53□□□□□ -1.84
ECM16YMR128W EAF3Q12432 401 aa3.53□□□□□ -1.84
ECM16YMR128W SLM5P25345 492 aaKnown RBP3.53□□□□□ -1.84
ECM16YMR128W CAM1P29547 415 aaKnown RBP3.53□□□□□ -1.84
ECM16YMR128W TMA19P35691 167 aaKnown RBP3.53□□□□□ -1.84
ECM16YMR128W SSO2P39926 295 aa3.53□□□□□ -1.84
ECM16YMR128W YGR201CP42936 225 aa3.53□□□□□ -1.84
ECM16YMR128W SIP4P46954 829 aa3.53□□□□□ -1.84
ECM16YMR128W SUT2Q12286 268 aa3.53□□□□□ -1.84
ECM16YMR128W UTR1P21373 530 aa3.53□□□□□ -1.84
ECM16YMR128W CWH43P25618 953 aa3.53□□□□□ -1.84
ECM16YMR128W MSS4P38994 779 aa3.53□□□□□ -1.84
ECM16YMR128W PTI1P39927 425 aaPredicted RBP3.53□□□□□ -1.84
ECM16YMR128W CIN1P40987 1014 aa3.53□□□□□ -1.84
ECM16YMR128W CHA4P43634 648 aa3.53□□□□□ -1.84
ECM16YMR128W PBP1P53297 722 aaKnown RBP3.53□□□□□ -1.84
ECM16YMR128W YPQ1Q12010 308 aa3.53□□□□□ -1.84
ECM16YMR128W KIN28P06242 306 aa3.52□□□□□ -1.85
ECM16YMR128W PEP4P07267 405 aaKnown RBP3.52□□□□□ -1.85
ECM16YMR128W FUS3P16892 353 aaKnown RBP3.52□□□□□ -1.85
ECM16YMR128W SAC7P17121 654 aa3.52□□□□□ -1.85
ECM16YMR128W ITR1P30605 584 aa3.52□□□□□ -1.85
ECM16YMR128W CBT1P36038 271 aaPredicted RBP3.52□□□□□ -1.85
ECM16YMR128W FMP10P40098 244 aa3.52□□□□□ -1.85
ECM16YMR128W URM1P40554 99 aaPredicted RBP3.52□□□□□ -1.85
ECM16YMR128W CAT5P41735 233 aa3.52□□□□□ -1.85
ECM16YMR128W BAP3P41815 604 aa3.52□□□□□ -1.85
ECM16YMR128W TAD2P47058 250 aa3.52□□□□□ -1.85
ECM16YMR128W TOS2P50078 622 aa3.52□□□□□ -1.85
ECM16YMR128W FOL2P51601 243 aaKnown RBP3.52□□□□□ -1.85
ECM16YMR128W SGF73P53165 657 aa3.52□□□□□ -1.85
ECM16YMR128W YNL260CP53846 198 aa3.52□□□□□ -1.85
ECM16YMR128W CTL1Q03220 320 aaKnown RBP3.52□□□□□ -1.85
ECM16YMR128W PRM15Q03262 622 aa3.52□□□□□ -1.85
ECM16YMR128W YMR206WQ03695 313 aa3.52□□□□□ -1.85
ECM16YMR128W SSY1Q03770 852 aa3.52□□□□□ -1.85
ECM16YMR128W VBA1Q04301 562 aa3.52□□□□□ -1.85
ECM16YMR128W GAS2Q06135 555 aa3.52□□□□□ -1.85
ECM16YMR128W NMD4Q12129 218 aa3.52□□□□□ -1.85
ECM16YMR128W SPC3Q12133 184 aa3.52□□□□□ -1.85
ECM16YMR128W YOL107WQ12239 342 aa3.52□□□□□ -1.85
ECM16YMR128W PRB1P09232 635 aa3.52□□□□□ -1.85
ECM16YMR128W YMC1P32331 307 aa3.52□□□□□ -1.85
ECM16YMR128W VPH1P32563 840 aaKnown RBP3.52□□□□□ -1.85
ECM16YMR128W LOT5P34234 306 aa3.52□□□□□ -1.85
ECM16YMR128W YPT52P36018 234 aaKnown RBP3.52□□□□□ -1.85
ECM16YMR128W HMT1P38074 348 aa3.52□□□□□ -1.85
ECM16YMR128W ZTA1P38230 334 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms