RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C SRB2P34162 210 aa3.52□□□□□ -1.85
BLS1YLR408C EFM1P38732 585 aa3.52□□□□□ -1.85
BLS1YLR408C RRT13P40042 185 aa3.52□□□□□ -1.85
BLS1YLR408C TAF6P53040 516 aa3.52□□□□□ -1.85
BLS1YLR408C PRO2P54885 456 aaKnown RBP3.52□□□□□ -1.85
BLS1YLR408C API2Q04413 109 aa3.52□□□□□ -1.85
BLS1YLR408C STE2D6VTK4 431 aa3.51□□□□□ -1.85
BLS1YLR408C RPS19AP07280 144 aaKnown RBP3.51□□□□□ -1.85
BLS1YLR408C RPS19BP07281 144 aaPredicted RBP3.51□□□□□ -1.85
BLS1YLR408C GAL3P13045 520 aa3.51□□□□□ -1.85
BLS1YLR408C ACB1P31787 87 aa3.51□□□□□ -1.85
BLS1YLR408C YKL071WP36086 256 aa3.51□□□□□ -1.85
BLS1YLR408C FHL1P39521 936 aa3.51□□□□□ -1.85
BLS1YLR408C PXR1P53335 271 aaPredicted RBP3.51□□□□□ -1.85
BLS1YLR408C RNY1Q02933 434 aaKnown RBP3.51□□□□□ -1.85
BLS1YLR408C YDR018CQ12185 396 aa3.51□□□□□ -1.85
BLS1YLR408C REP1P03871 373 aa3.5□□□□□ -1.85
BLS1YLR408C TRX1P22217 103 aaKnown RBP3.5□□□□□ -1.85
BLS1YLR408C RBK1P25332 333 aa3.5□□□□□ -1.85
BLS1YLR408C VMA5P31412 392 aaKnown RBP3.5□□□□□ -1.85
BLS1YLR408C SMF2P38778 549 aa3.5□□□□□ -1.85
BLS1YLR408C YFR018CP43599 363 aa3.5□□□□□ -1.85
BLS1YLR408C COQ5P49017 307 aa3.5□□□□□ -1.85
BLS1YLR408C VPS20Q04272 221 aa3.5□□□□□ -1.85
BLS1YLR408C MMT2Q08970 484 aa3.5□□□□□ -1.85
BLS1YLR408C MSS116P15424 664 aaKnown RBP3.49□□□□□ -1.85
BLS1YLR408C RAD23P32628 398 aaKnown RBP3.49□□□□□ -1.85
BLS1YLR408C TPC1P53257 314 aa3.49□□□□□ -1.85
BLS1YLR408C HCH1P53834 153 aa3.49□□□□□ -1.85
BLS1YLR408C RVB1Q03940 463 aaKnown RBP3.49□□□□□ -1.85
BLS1YLR408C PRM4Q12498 284 aa3.49□□□□□ -1.85
BLS1YLR408C YAL067W-AQ8TGK6 75 aa3.49□□□□□ -1.85
BLS1YLR408C RPL18AP0CX49 186 aaKnown RBP3.48□□□□□ -1.85
BLS1YLR408C RPL18BP0CX50 186 aaKnown RBP3.48□□□□□ -1.85
BLS1YLR408C DBP7P36120 742 aaKnown RBP3.48□□□□□ -1.85
BLS1YLR408C TAE1P38340 232 aa3.48□□□□□ -1.85
BLS1YLR408C RDL2Q08742 149 aaKnown RBP3.48□□□□□ -1.85
BLS1YLR408C CDC37P06101 506 aaKnown RBP3.47□□□□□ -1.85
BLS1YLR408C CTA1P15202 515 aa3.47□□□□□ -1.85
BLS1YLR408C CBF5P33322 483 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
BLS1YLR408C RCK1P38622 512 aa3.47□□□□□ -1.85
BLS1YLR408C YER184CP39961 794 aa3.47□□□□□ -1.85
BLS1YLR408C UFE1P41834 346 aa3.47□□□□□ -1.85
BLS1YLR408C YFL040WP43562 540 aa3.47□□□□□ -1.85
BLS1YLR408C APC4Q04601 652 aa3.47□□□□□ -1.85
BLS1YLR408C MRX9Q07349 420 aaKnown RBP3.47□□□□□ -1.85
BLS1YLR408C YLR012CQ07927 99 aa3.47□□□□□ -1.85
BLS1YLR408C YOL029CQ08187 201 aa3.47□□□□□ -1.85
BLS1YLR408C VPS63O13549 108 aa3.46□□□□□ -1.86
BLS1YLR408C PET18P25362 215 aa3.46□□□□□ -1.86
BLS1YLR408C ITR2P30606 609 aa3.46□□□□□ -1.86
BLS1YLR408C CYM1P32898 989 aa3.46□□□□□ -1.86
BLS1YLR408C SUR1P33300 382 aa3.46□□□□□ -1.86
BLS1YLR408C BUD2P33314 1104 aa3.46□□□□□ -1.86
BLS1YLR408C FRM2P37261 193 aa3.46□□□□□ -1.86
BLS1YLR408C RRG9P40156 214 aa3.46□□□□□ -1.86
BLS1YLR408C AIM20P40451 204 aa3.46□□□□□ -1.86
BLS1YLR408C INA22P40576 216 aa3.46□□□□□ -1.86
BLS1YLR408C NRM1P53718 249 aa3.46□□□□□ -1.86
BLS1YLR408C DTD1Q07648 150 aaKnown RBP3.46□□□□□ -1.86
BLS1YLR408C REX3Q12090 404 aa3.46□□□□□ -1.86
BLS1YLR408C AUS1Q08409 1394 aa3.46□□□□□ -1.86
BLS1YLR408C FUS3P16892 353 aaKnown RBP3.45□□□□□ -1.86
BLS1YLR408C YPS1P32329 569 aa3.45□□□□□ -1.86
BLS1YLR408C YKL187CP34231 750 aa3.45□□□□□ -1.86
BLS1YLR408C KTI12P34253 313 aaKnown RBP3.45□□□□□ -1.86
BLS1YLR408C SSO2P39926 295 aa3.45□□□□□ -1.86
BLS1YLR408C PMT4P46971 762 aa3.45□□□□□ -1.86
BLS1YLR408C UBX2Q04228 584 aa3.45□□□□□ -1.86
BLS1YLR408C BUR2Q05949 395 aa3.45□□□□□ -1.86
BLS1YLR408C RTC5Q12108 567 aaKnown RBP3.45□□□□□ -1.86
BLS1YLR408C APC2Q12440 853 aa3.45□□□□□ -1.86
BLS1YLR408C MHP1P43638 1398 aa3.44□□□□□ -1.86
BLS1YLR408C ZIP1P31111 875 aa3.44□□□□□ -1.86
BLS1YLR408C MEI5P32489 222 aa3.44□□□□□ -1.86
BLS1YLR408C YDR089WP38966 869 aa3.44□□□□□ -1.86
BLS1YLR408C UTP25P40498 721 aaKnown RBP3.44□□□□□ -1.86
BLS1YLR408C SDS23P53172 527 aa3.44□□□□□ -1.86
BLS1YLR408C YGR168CP53293 376 aa3.44□□□□□ -1.86
BLS1YLR408C HST4P53688 370 aa3.44□□□□□ -1.86
BLS1YLR408C CBP2P03874 630 aaPredicted RBP3.43□□□□□ -1.86
BLS1YLR408C CKA2P19454 339 aa3.43□□□□□ -1.86
BLS1YLR408C TPS2P31688 896 aaKnown RBP3.43□□□□□ -1.86
BLS1YLR408C TRR2P38816 342 aa3.43□□□□□ -1.86
BLS1YLR408C DIB1Q06819 143 aaPredicted RBP3.43□□□□□ -1.86
BLS1YLR408C PAA1Q12447 191 aaKnown RBP3.43□□□□□ -1.86
BLS1YLR408C SPS100P13130 326 aa3.42□□□□□ -1.86
BLS1YLR408C COX10P21592 462 aa3.42□□□□□ -1.86
BLS1YLR408C YKL162CP36052 402 aa3.42□□□□□ -1.86
BLS1YLR408C CDC40P40968 455 aaPredicted RBP3.42□□□□□ -1.86
BLS1YLR408C INP2Q03824 705 aa3.42□□□□□ -1.86
BLS1YLR408C CAB5Q03941 241 aa3.42□□□□□ -1.86
BLS1YLR408C MRX8Q05473 314 aa3.42□□□□□ -1.86
BLS1YLR408C MIM1Q08176 113 aa3.42□□□□□ -1.86
BLS1YLR408C SLF1Q12034 447 aaKnown RBP3.42□□□□□ -1.86
BLS1YLR408C FMT1P32785 401 aa3.41□□□□□ -1.86
BLS1YLR408C RFT1P38206 574 aaPredicted RBP3.41□□□□□ -1.86
BLS1YLR408C SWC5P38326 303 aa3.41□□□□□ -1.86
BLS1YLR408C POP2P39008 433 aa3.41□□□□□ -1.86
BLS1YLR408C FRT2P39734 528 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 726 ms