RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W SIA1Q12212 622 aa2.23□□□□□ -2.05
HRD3YLR207W PRP46Q12417 451 aaPredicted RBP2.23□□□□□ -2.05
HRD3YLR207W AIM45Q12480 344 aaKnown RBP2.23□□□□□ -2.05
HRD3YLR207W UBA3Q99344 299 aa2.23□□□□□ -2.05
HRD3YLR207W SUC2P00724 532 aa2.22□□□□□ -2.05
HRD3YLR207W RPS16AP0CX51 143 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W RPS16BP0CX52 143 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W RVS161P25343 265 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W RME1P32338 300 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W PDR3P33200 976 aa2.22□□□□□ -2.05
HRD3YLR207W CSG2P35206 410 aa2.22□□□□□ -2.05
HRD3YLR207W YPK3P38070 525 aa2.22□□□□□ -2.05
HRD3YLR207W RFS1P38234 210 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W IML3P38265 245 aa2.22□□□□□ -2.05
HRD3YLR207W LYS1P38998 373 aaRIP-Chip data2.22□□□□□ -2.05 RIP-Chip
HRD3YLR207W YMR134WP40207 237 aa2.22□□□□□ -2.05
HRD3YLR207W YRB2P40517 327 aa2.22□□□□□ -2.05
HRD3YLR207W OTU1P43558 301 aa2.22□□□□□ -2.05
HRD3YLR207W SSN8P47821 323 aa2.22□□□□□ -2.05
HRD3YLR207W GPI15P53961 229 aa2.22□□□□□ -2.05
HRD3YLR207W RHO4Q00246 291 aa2.22□□□□□ -2.05
HRD3YLR207W STP1Q00947 519 aa2.22□□□□□ -2.05
HRD3YLR207W LGE1Q02796 332 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W MRPS17Q03246 237 aaPredicted RBP2.22□□□□□ -2.05
HRD3YLR207W RVB1Q03940 463 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W CAC2Q04199 468 aa2.22□□□□□ -2.05
HRD3YLR207W GMC2Q06201 188 aa2.22□□□□□ -2.05
HRD3YLR207W YPQ1Q12010 308 aa2.22□□□□□ -2.05
HRD3YLR207W CRC1Q12289 327 aa2.22□□□□□ -2.05
HRD3YLR207W PAB1P04147 577 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
HRD3YLR207W ATP1P07251 545 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W YAR066WP0CX18 203 aa2.22□□□□□ -2.05
HRD3YLR207W YHR214WP0CX19 203 aa2.22□□□□□ -2.05
HRD3YLR207W MRP1P10662 321 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W NHP6BP11633 99 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W YAP1P19880 650 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W MXR2P25566 168 aa2.22□□□□□ -2.05
HRD3YLR207W BUB3P26449 341 aa2.22□□□□□ -2.05
HRD3YLR207W PPA2P28239 310 aa2.22□□□□□ -2.05
HRD3YLR207W HIS2P38635 335 aa2.22□□□□□ -2.05
HRD3YLR207W YIL024CP40543 189 aa2.22□□□□□ -2.05
HRD3YLR207W HIT1P46973 164 aa2.22□□□□□ -2.05
HRD3YLR207W KAP114P53067 1004 aa2.22□□□□□ -2.05
HRD3YLR207W PKP2P53170 491 aa2.22□□□□□ -2.05
HRD3YLR207W RSC9Q03124 581 aa2.22□□□□□ -2.05
HRD3YLR207W IZH1Q03419 316 aa2.22□□□□□ -2.05
HRD3YLR207W BET5Q03630 159 aa2.22□□□□□ -2.05
HRD3YLR207W YMR114CQ04471 368 aaKnown RBP2.22□□□□□ -2.05
HRD3YLR207W NAT4Q04751 285 aa2.22□□□□□ -2.05
HRD3YLR207W SNT309Q06091 175 aaPredicted RBP2.22□□□□□ -2.05
HRD3YLR207W DIC1Q06143 298 aa2.22□□□□□ -2.05
HRD3YLR207W DDC1Q08949 612 aa2.22□□□□□ -2.05
HRD3YLR207W DAP1Q12091 152 aa2.22□□□□□ -2.05
HRD3YLR207W YPR022CQ12139 1133 aa2.22□□□□□ -2.05
HRD3YLR207W HRT3Q12347 344 aa2.22□□□□□ -2.05
HRD3YLR207W YOR338WQ99326 363 aa2.22□□□□□ -2.05
HRD3YLR207W MSF1P08425 469 aa2.21□□□□□ -2.06
HRD3YLR207W POL30P15873 258 aaKnown RBP2.21□□□□□ -2.06
HRD3YLR207W DAL81P21657 970 aa2.21□□□□□ -2.06
HRD3YLR207W MRPL8P22353 238 aa2.21□□□□□ -2.06
HRD3YLR207W CTR86P25355 563 aa2.21□□□□□ -2.06
HRD3YLR207W PUT3P25502 979 aaPredicted RBP2.21□□□□□ -2.06
HRD3YLR207W PPZ1P26570 692 aa2.21□□□□□ -2.06
HRD3YLR207W CUE2P36075 443 aaKnown RBP2.21□□□□□ -2.06
HRD3YLR207W YCR041WP37265 110 aa2.21□□□□□ -2.06
HRD3YLR207W URA8P38627 578 aaPredicted RBP2.21□□□□□ -2.06
HRD3YLR207W CFD1P40558 293 aa2.21□□□□□ -2.06
HRD3YLR207W COX16P47081 118 aa2.21□□□□□ -2.06
HRD3YLR207W BIO3P50277 480 aa2.21□□□□□ -2.06
HRD3YLR207W YIP1P53039 248 aa2.21□□□□□ -2.06
HRD3YLR207W HXT11P54862 567 aa2.21□□□□□ -2.06
HRD3YLR207W SPR6Q01684 191 aa2.21□□□□□ -2.06
HRD3YLR207W NUP100Q02629 959 aa2.21□□□□□ -2.06
HRD3YLR207W RSN1Q03516 953 aa2.21□□□□□ -2.06
HRD3YLR207W PRM6Q04705 352 aa2.21□□□□□ -2.06
HRD3YLR207W PAM18Q07914 168 aa2.21□□□□□ -2.06
HRD3YLR207W YOR029WQ12243 111 aa2.21□□□□□ -2.06
HRD3YLR207W RKM5Q12367 367 aa2.21□□□□□ -2.06
HRD3YLR207W YOS9Q99220 542 aa2.21□□□□□ -2.06
HRD3YLR207W TDH3P00359 332 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
HRD3YLR207W HEM2P05373 342 aa2.21□□□□□ -2.06
HRD3YLR207W DAL82P21705 255 aa2.21□□□□□ -2.06
HRD3YLR207W POP5P28005 173 aa2.21□□□□□ -2.06
HRD3YLR207W ITR1P30605 584 aa2.21□□□□□ -2.06
HRD3YLR207W COS9P36034 407 aa2.21□□□□□ -2.06
HRD3YLR207W LCP5P40079 357 aaPredicted RBP2.21□□□□□ -2.06
HRD3YLR207W RTS2P40962 232 aa2.21□□□□□ -2.06
HRD3YLR207W FMP33P46998 180 aa2.21□□□□□ -2.06
HRD3YLR207W AIM24P47127 394 aa2.21□□□□□ -2.06
HRD3YLR207W FRE4P53746 719 aa2.21□□□□□ -2.06
HRD3YLR207W KTR6P54070 446 aa2.21□□□□□ -2.06
HRD3YLR207W MSS11Q03825 758 aa2.21□□□□□ -2.06
HRD3YLR207W SPG3Q04398 127 aaPredicted RBP2.21□□□□□ -2.06
HRD3YLR207W PBP4Q07362 185 aaKnown RBP2.21□□□□□ -2.06
HRD3YLR207W CMS1Q07897 291 aaKnown RBP2.21□□□□□ -2.06
HRD3YLR207W YDR034W-BQ6Q5X2 51 aa2.21□□□□□ -2.06
HRD3YLR207W AI5_BETAQ9ZZX0 354 aa2.21□□□□□ -2.06
HRD3YLR207W TEL1P38110 2787 aa2.21□□□□□ -2.06
HRD3YLR207W PRP16P15938 1071 aaPredicted RBP2.2□□□□□ -2.06
HRD3YLR207W ARF2P19146 181 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms