RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W ECM10P39987 644 aa3.45□□□□□ -1.86
SSL1YLR005W LSM4P40070 187 aaKnown RBP3.45□□□□□ -1.86
SSL1YLR005W ALG5P40350 334 aa3.45□□□□□ -1.86
SSL1YLR005W JEM1P40358 645 aa3.45□□□□□ -1.86
SSL1YLR005W AVT7P40501 490 aa3.45□□□□□ -1.86
SSL1YLR005W RET2P43621 546 aa3.45□□□□□ -1.86
SSL1YLR005W YPL039WQ03080 316 aa3.45□□□□□ -1.86
SSL1YLR005W FAR8Q05040 523 aa3.45□□□□□ -1.86
SSL1YLR005W SSQ1Q05931 657 aaPredicted RBP3.45□□□□□ -1.86
SSL1YLR005W ARR1Q06596 294 aa3.45□□□□□ -1.86
SSL1YLR005W POM34Q12445 299 aa3.45□□□□□ -1.86
SSL1YLR005W DYN1P36022 4092 aa3.44□□□□□ -1.86
SSL1YLR005W ZWF1P11412 505 aaKnown RBP3.44□□□□□ -1.86
SSL1YLR005W UNG1P12887 359 aa3.44□□□□□ -1.86
SSL1YLR005W YCL049CP25577 312 aa3.44□□□□□ -1.86
SSL1YLR005W FRE2P36033 711 aa3.44□□□□□ -1.86
SSL1YLR005W YHL037CP38733 133 aa3.44□□□□□ -1.86
SSL1YLR005W PTH1P38876 190 aaKnown RBP3.44□□□□□ -1.86
SSL1YLR005W VPS41P38959 992 aa3.44□□□□□ -1.86
SSL1YLR005W FAA2P39518 744 aa3.44□□□□□ -1.86
SSL1YLR005W GPP2P40106 250 aaKnown RBP3.44□□□□□ -1.86
SSL1YLR005W PFK26P40433 827 aaKnown RBP3.44□□□□□ -1.86
SSL1YLR005W GAB1P41733 394 aa3.44□□□□□ -1.86
SSL1YLR005W NIT2P47016 307 aa3.44□□□□□ -1.86
SSL1YLR005W MSY1P48527 492 aa3.44□□□□□ -1.86
SSL1YLR005W MRK1P50873 501 aa3.44□□□□□ -1.86
SSL1YLR005W OGG1P53397 376 aaPredicted RBP3.44□□□□□ -1.86
SSL1YLR005W TIM10P87108 93 aa3.44□□□□□ -1.86
SSL1YLR005W NUP116Q02630 1113 aa3.44□□□□□ -1.86
SSL1YLR005W MMT1Q03218 510 aa3.44□□□□□ -1.86
SSL1YLR005W RAF1Q06891 181 aa3.44□□□□□ -1.86
SSL1YLR005W RSA1Q08932 381 aa3.44□□□□□ -1.86
SSL1YLR005W BSC1Q12140 328 aa3.44□□□□□ -1.86
SSL1YLR005W NOT5Q12514 560 aaPredicted RBP3.44□□□□□ -1.86
SSL1YLR005W ADE5,7P07244 802 aaKnown RBP3.43□□□□□ -1.86
SSL1YLR005W PUT2P07275 575 aa3.43□□□□□ -1.86
SSL1YLR005W RAP1P11938 827 aa3.43□□□□□ -1.86
SSL1YLR005W YCK1P23291 538 aa3.43□□□□□ -1.86
SSL1YLR005W PHO91P27514 894 aa3.43□□□□□ -1.86
SSL1YLR005W DEP1P31385 405 aa3.43□□□□□ -1.86
SSL1YLR005W PUP2P32379 260 aa3.43□□□□□ -1.86
SSL1YLR005W MSS1P32559 526 aaPredicted RBP3.43□□□□□ -1.86
SSL1YLR005W YPT7P32939 208 aa3.43□□□□□ -1.86
SSL1YLR005W OAF3P36023 863 aa3.43□□□□□ -1.86
SSL1YLR005W FAT1P38225 669 aa3.43□□□□□ -1.86
SSL1YLR005W ANS1P38832 159 aa3.43□□□□□ -1.86
SSL1YLR005W SMK1P41808 388 aa3.43□□□□□ -1.86
SSL1YLR005W GDS1P41913 522 aa3.43□□□□□ -1.86
SSL1YLR005W PTR3P43606 678 aa3.43□□□□□ -1.86
SSL1YLR005W RNR4P49723 345 aaKnown RBP3.43□□□□□ -1.86
SSL1YLR005W IMA1P53051 589 aa3.43□□□□□ -1.86
SSL1YLR005W RIM13Q03792 727 aa3.43□□□□□ -1.86
SSL1YLR005W NAT4Q04751 285 aa3.43□□□□□ -1.86
SSL1YLR005W GRE1Q08969 168 aa3.43□□□□□ -1.86
SSL1YLR005W PSY3Q12318 242 aa3.43□□□□□ -1.86
SSL1YLR005W JLP1Q12358 412 aa3.43□□□□□ -1.86
SSL1YLR005W DBP10Q12389 995 aaKnown RBP3.43□□□□□ -1.86
SSL1YLR005W FOL3Q12676 427 aaPredicted RBP3.43□□□□□ -1.86
SSL1YLR005W Q0297Q9ZZV8 51 aa3.43□□□□□ -1.86
SSL1YLR005W CAR1P00812 333 aaKnown RBP3.42□□□□□ -1.86
SSL1YLR005W FRS1P15624 595 aaKnown RBP3.42□□□□□ -1.86
SSL1YLR005W CLB2P24869 491 aa3.42□□□□□ -1.86
SSL1YLR005W CLB3P24870 427 aa3.42□□□□□ -1.86
SSL1YLR005W APL3P38065 1025 aa3.42□□□□□ -1.86
SSL1YLR005W YBL029WP38201 376 aa3.42□□□□□ -1.86
SSL1YLR005W YHR177WP38867 453 aa3.42□□□□□ -1.86
SSL1YLR005W SHO1P40073 367 aa3.42□□□□□ -1.86
SSL1YLR005W PRE6P40303 254 aaKnown RBP3.42□□□□□ -1.86
SSL1YLR005W TOM22P49334 152 aa3.42□□□□□ -1.86
SSL1YLR005W MRM2P53123 320 aa3.42□□□□□ -1.86
SSL1YLR005W DCP2P53550 970 aaKnown RBP3.42□□□□□ -1.86
SSL1YLR005W DBP6P53734 629 aaKnown RBP3.42□□□□□ -1.86
SSL1YLR005W MRPL19P53875 158 aa3.42□□□□□ -1.86
SSL1YLR005W YMR010WQ03687 405 aa3.42□□□□□ -1.86
SSL1YLR005W EKI1Q03764 534 aa3.42□□□□□ -1.86
SSL1YLR005W RAD30Q04049 632 aa3.42□□□□□ -1.86
SSL1YLR005W YKU80Q04437 629 aa3.42□□□□□ -1.86
SSL1YLR005W MRPL1Q04599 285 aa3.42□□□□□ -1.86
SSL1YLR005W YEH2Q07950 538 aa3.42□□□□□ -1.86
SSL1YLR005W SGT1Q08446 395 aa3.42□□□□□ -1.86
SSL1YLR005W SLF1Q12034 447 aaKnown RBP3.42□□□□□ -1.86
SSL1YLR005W RKI1Q12189 258 aa3.42□□□□□ -1.86
SSL1YLR005W YDL180WQ12301 547 aa3.42□□□□□ -1.86
SSL1YLR005W NCA2Q12374 616 aa3.42□□□□□ -1.86
SSL1YLR005W SNF8Q12483 233 aa3.42□□□□□ -1.86
SSL1YLR005W MHF1Q3E835 90 aa3.42□□□□□ -1.86
SSL1YLR005W DET1Q99288 334 aaKnown RBP3.42□□□□□ -1.86
SSL1YLR005W RPL15AP05748 204 aaKnown RBP3.41□□□□□ -1.86
SSL1YLR005W PRB1P09232 635 aa3.41□□□□□ -1.86
SSL1YLR005W PDA1P16387 420 aaKnown RBP3.41□□□□□ -1.86
SSL1YLR005W DBP3P20447 523 aaKnown RBP3.41□□□□□ -1.86
SSL1YLR005W NUP1P20676 1076 aa3.41□□□□□ -1.86
SSL1YLR005W SAN1P22470 610 aa3.41□□□□□ -1.86
SSL1YLR005W YCR051WP25631 222 aa3.41□□□□□ -1.86
SSL1YLR005W MRPS5P33759 307 aa3.41□□□□□ -1.86
SSL1YLR005W ELF1P36053 145 aa3.41□□□□□ -1.86
SSL1YLR005W YBR032WP38223 100 aa3.41□□□□□ -1.86
SSL1YLR005W ARN2P38724 620 aa3.41□□□□□ -1.86
SSL1YLR005W COG3P40094 801 aa3.41□□□□□ -1.86
SSL1YLR005W PMT6P42934 759 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms