RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	VAC7	P53950	1165 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	SKI8	Q02793	397 aa	Predicted RBP	4.56	□□□□□ -1.68
SIS2	YKR072C	YPL077C	Q02831	240 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	RIM13	Q03792	727 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	YMR034C	Q05131	434 aa	Predicted RBP	4.56	□□□□□ -1.68
SIS2	YKR072C	THI7	Q05998	598 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	ASR1	Q06834	288 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	NDE2	Q07500	545 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	SGT1	Q08446	395 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	RKM5	Q12367	367 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	ORT1	Q12375	292 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	YOP1	Q12402	180 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	SEC3	P33332	1336 aa	Known RBP	4.56	□□□□□ -1.68
SIS2	YKR072C	POL1	P13382	1468 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	QCR7	P00128	127 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	BI2	P03873	423 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	RNA15	P25299	296 aa	Predicted RBP	4.55	□□□□□ -1.68
SIS2	YKR072C	NDC1	P32500	655 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	FLO10	P36170	1169 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	FES1	P38260	290 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	POP7	P38291	140 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	PRS2	P38620	318 aa	Known RBP	4.55	□□□□□ -1.68
SIS2	YKR072C	URA8	P38627	578 aa	Predicted RBP	4.55	□□□□□ -1.68
SIS2	YKR072C	TRM5	P38793	499 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	BDH2	P39713	417 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	EXO1	P39875	702 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	HAT2	P39984	401 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	SNZ3	P43545	298 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	HOC1	P47124	396 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	YIP1	P53039	248 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	SNZ2	P53824	298 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	IRC4	Q03036	179 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	YDR209C	Q03480	137 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	SPC2	Q04969	178 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	CSM4	Q08955	156 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	GRE1	Q08969	168 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	PER33	Q12144	273 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	TSC11	P40061	1430 aa		4.55	□□□□□ -1.68
SIS2	YKR072C	TRP3	P00937	484 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	MAK32	P23060	363 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	CSE1	P33307	960 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	DTR1	P38125	572 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	PHO90	P39535	881 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	RPL10	P41805	221 aa	Known RBP	4.54	□□□□□ -1.68
SIS2	YKR072C	MNN10	P50108	393 aa	Known RBP	4.54	□□□□□ -1.68
SIS2	YKR072C	YPT32	P51996	222 aa	Known RBP	4.54	□□□□□ -1.68
SIS2	YKR072C	CPD1	P53314	239 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	RRN9	P53437	365 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	CAF40	P53829	373 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	MSS11	Q03825	758 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	ARP10	Q04549	284 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	NNT1	Q05874	261 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	YDL218W	Q07629	317 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	SRL2	Q12020	392 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SIS2	YKR072C	YCL012C	Q8J0M4	134 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	SNT2	P53127	1403 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	YOR1	P53049	1477 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	ULS1	Q08562	1619 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	SPO12	P17123	173 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	MBR1	P23493	339 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	PTP1	P25044	335 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	YCR007C	P25354	239 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	LSB5	P25369	354 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	SSO1	P32867	290 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	SPO23	P33757	523 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	YKL063C	P35725	167 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	AIM3	P38266	947 aa	Known RBP	4.54	□□□□□ -1.68
SIS2	YKR072C	YHR035W	P38769	630 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	PCL5	P38794	229 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	NPT1	P39683	429 aa	Known RBP	4.54	□□□□□ -1.68
SIS2	YKR072C	YIR016W	P40572	265 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	KEG1	P43614	200 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	ERG13	P54839	491 aa	Known RBP	4.54	□□□□□ -1.68
SIS2	YKR072C	SPR6	Q01684	191 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	BET5	Q03630	159 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	SWF1	Q04629	336 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	ALE1	Q08548	619 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	MCA1	Q08601	432 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	POM33	Q12164	279 aa		4.54	□□□□□ -1.68
SIS2	YKR072C	MKK1	P32490	508 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	MRPL6	P32904	214 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	YNK1	P36010	153 aa	Known RBP	4.53	□□□□□ -1.68
SIS2	YKR072C	FZO1	P38297	855 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	RCK2	P38623	610 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	ARN1	P38731	627 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	VEL1	P53058	206 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	FRE4	P53746	719 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	SLD5	Q03406	294 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	VBA1	Q04301	562 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	PEX10	Q05568	337 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	GLO2	Q05584	274 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	NCA2	Q12374	616 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	IZH4	Q99393	312 aa		4.53	□□□□□ -1.68
SIS2	YKR072C	TRM3	Q07527	1436 aa		4.52	□□□□□ -1.69
SIS2	YKR072C	YDR157W	A0A023PZE8	133 aa		4.52	□□□□□ -1.69
SIS2	YKR072C	HEM1	P09950	548 aa	Predicted RBP	4.52	□□□□□ -1.69
SIS2	YKR072C	RPS2	P25443	254 aa	Known RBP	4.52	□□□□□ -1.69
SIS2	YKR072C	RFA3	P26755	122 aa	Known RBP	4.52	□□□□□ -1.69
SIS2	YKR072C	NAM9	P27929	486 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 58 ms