RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	ZRT3	P34240	503 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	SNU114	P36048	1008 aa	Known RBP	4.67	□□□□□ -1.66
KTI12	YKL110C	FMP23	P38231	175 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	YJL218W	P40892	196 aa	Known RBP	4.67	□□□□□ -1.66
KTI12	YKL110C	PAM16	P42949	149 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	IRC7	P43623	340 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	BAT2	P47176	376 aa	Known RBP	4.67	□□□□□ -1.66
KTI12	YKL110C	NQM1	P53228	333 aa	Predicted RBP	4.67	□□□□□ -1.66
KTI12	YKL110C	TPC1	P53257	314 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	BUD17	P53727	317 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	CIK1	Q01649	594 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
KTI12	YKL110C	EGD1	Q02642	157 aa	Known RBP	4.67	□□□□□ -1.66
KTI12	YKL110C	SIZ1	Q04195	904 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	YMR087W	Q04299	284 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	PLM2	Q04383	521 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	DAL4	Q04895	635 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	VID22	Q05934	901 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	STP3	Q05937	343 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	IRC13	Q08630	104 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	RKM1	Q08961	583 aa	Predicted RBP	4.67	□□□□□ -1.66
KTI12	YKL110C	YDL211C	Q12121	372 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	LEU9	Q12166	604 aa	Known RBP	4.67	□□□□□ -1.66
KTI12	YKL110C	LAG2	Q92325	660 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	CDC31	P06704	161 aa	Known RBP	4.66	□□□□□ -1.66
KTI12	YKL110C	APN1	P22936	367 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	MXR2	P25566	168 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	BUD23	P25627	275 aa	Predicted RBP	4.66	□□□□□ -1.66
KTI12	YKL110C	YJU2	P28320	278 aa	Predicted RBP	4.66	□□□□□ -1.66
KTI12	YKL110C	SSH4	P32343	579 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	TEF4	P36008	412 aa	Known RBP	4.66	□□□□□ -1.66
KTI12	YKL110C	SHE1	P38200	338 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	FCY21	P40039	528 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	CFD1	P40558	293 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	AAD10	P47182	288 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	RPS12	P48589	143 aa	Known RBP	4.66	□□□□□ -1.66
KTI12	YKL110C	YGR250C	P53316	781 aa	Known RBP	4.66	□□□□□ -1.66
KTI12	YKL110C	YKR011C	Q02209	353 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	GRX3	Q03835	250 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	ARV1	Q06541	321 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	YLR040C	Q07988	224 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	YDL007C-A	Q2V2Q0	85 aa		4.66	□□□□□ -1.66
KTI12	YKL110C	FAS1	P07149	2051 aa	Known RBP	4.65	□□□□□ -1.66
KTI12	YKL110C	ADE5,7	P07244	802 aa	Known RBP	4.65	□□□□□ -1.67
KTI12	YKL110C	BAR1	P12630	587 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	SPT14	P32363	452 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	ASF2	P32448	525 aa	Predicted RBP	4.65	□□□□□ -1.67
KTI12	YKL110C	YEF1	P32622	495 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	ORC2	P32833	620 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	ECM15	P35195	104 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	RCN1	P36054	211 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	YHR035W	P38769	630 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	NVJ1	P38881	321 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	CHL4	P38907	458 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	BUR6	P40096	142 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	YNL208W	P40159	199 aa	Known RBP	4.65	□□□□□ -1.67
KTI12	YKL110C	YIL152W	P40455	235 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	FMC1	P40491	155 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	UTP25	P40498	721 aa	Known RBP	4.65	□□□□□ -1.67
KTI12	YKL110C	SMK1	P41808	388 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	SER2	P42941	309 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	YAE1	P47118	141 aa	Predicted RBP	4.65	□□□□□ -1.67
KTI12	YKL110C	LSG1	P53145	640 aa	Known RBP	4.65	□□□□□ -1.67
KTI12	YKL110C	IMO32	P53219	342 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	MKC7	P53379	596 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	PGA1	P53896	198 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	YAT1	P80235	687 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	FDC1	Q03034	503 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	PEX10	Q05568	337 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	YLR173W	Q06247	608 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	RKM5	Q12367	367 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	YGR161W-C	Q3E744	92 aa		4.65	□□□□□ -1.67
KTI12	YKL110C	BRR2	P32639	2163 aa	Known RBP	4.65	□□□□□ -1.67
KTI12	YKL110C	YEL009C-A	A0A023PZF2	135 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	YMR084W	A2P2R3	262 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	RPL1A	P0CX43	217 aa	Known RBP	4.64	□□□□□ -1.67
KTI12	YKL110C	RPL1B	P0CX44	217 aa	Known RBP	4.64	□□□□□ -1.67
KTI12	YKL110C	PTC6	P25646	442 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	SUR1	P33300	382 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	RPS27A	P35997	82 aa	Known RBP	4.64	□□□□□ -1.67
KTI12	YKL110C	UTH1	P36135	365 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	MCM7	P38132	845 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	RPS20	P38701	121 aa	Known RBP	4.64	□□□□□ -1.67
KTI12	YKL110C	RPS27B	P38711	82 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	IPI1	P38803	334 aa	Predicted RBP	4.64	□□□□□ -1.67
KTI12	YKL110C	TRR2	P38816	342 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	PRP39	P39682	629 aa	Known RBP	4.64	□□□□□ -1.67
KTI12	YKL110C	LTP1	P40347	161 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	ATF1	P40353	525 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	CIN1	P40987	1014 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	POP1	P41812	875 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	GDS1	P41913	522 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	MSS11	Q03825	758 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	SMA2	Q04658	369 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	CYK3	Q07533	885 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	BRX1	Q08235	291 aa	Known RBP	4.64	□□□□□ -1.67
KTI12	YKL110C	RRG7	Q08774	242 aa	Predicted RBP	4.64	□□□□□ -1.67
KTI12	YKL110C	UIP4	Q08926	304 aa		4.64	□□□□□ -1.67
KTI12	YKL110C	YOR289W	Q12012	251 aa	Predicted RBP	4.64	□□□□□ -1.67
KTI12	YKL110C	TPO4	Q12256	659 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 63.1 ms