RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT3	YIL038C	YPR011C	Q12251	326 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	SWM1	Q12379	170 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	MRX4	Q12467	430 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	CNA1	P23287	553 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	NTH1	P32356	751 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	NUP2	P32499	720 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	UTP11	P34247	250 aa	Predicted RBP	4.85	□□□□□ -1.63
NOT3	YIL038C	KAP120	Q02932	1032 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	PLM2	Q04383	521 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	SPO77	Q06134	477 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	SWA2	Q06677	668 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	TUB1	P09733	447 aa	Known RBP	4.85	□□□□□ -1.63
NOT3	YIL038C	ART10	P18634	518 aa	Known RBP	4.85	□□□□□ -1.63
NOT3	YIL038C	TYR1	P20049	452 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	HCM1	P25364	564 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	PEX3	P28795	441 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	ATP11	P32453	318 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	UGP1	P32861	499 aa	Known RBP	4.85	□□□□□ -1.63
NOT3	YIL038C	LHS1	P36016	881 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	SNU114	P36048	1008 aa	Known RBP	4.85	□□□□□ -1.63
NOT3	YIL038C	ECM8	P38246	354 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	ELO1	P39540	310 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	PDS1	P40316	373 aa	Predicted RBP	4.85	□□□□□ -1.63
NOT3	YIL038C	LYS12	P40495	371 aa	Known RBP	4.85	□□□□□ -1.63
NOT3	YIL038C	MSS2	P40990	351 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	NRG1	Q03125	231 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	YHC1	Q05900	231 aa	Known RBP	4.85	□□□□□ -1.63
NOT3	YIL038C	TEN1	Q07921	160 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	YLR030W	Q07967	263 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	SIA1	Q12212	622 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	MHF1	Q3E835	90 aa		4.85	□□□□□ -1.63
NOT3	YIL038C	YPT1	P01123	206 aa	Known RBP	4.84	□□□□□ -1.63
NOT3	YIL038C	CTR86	P25355	563 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	YMC1	P32331	307 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	CYS4	P32582	507 aa	Known RBP	4.84	□□□□□ -1.63
NOT3	YIL038C	TAT1	P38085	619 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	SKN7	P38889	622 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	MTW1	P39731	289 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	SER33	P40510	469 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	YPT32	P51996	222 aa	Known RBP	4.84	□□□□□ -1.63
NOT3	YIL038C	YGR066C	P53242	292 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	YAT1	P80235	687 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	YVH1	Q02256	364 aa	Known RBP	4.84	□□□□□ -1.63
NOT3	YIL038C	URC2	Q04411	772 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	ATG10	Q07879	167 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	YDR034W-B	Q6Q5X2	51 aa		4.84	□□□□□ -1.63
NOT3	YIL038C	UNG1	P12887	359 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	CDC13	P32797	924 aa	Known RBP	4.84	□□□□□ -1.64
NOT3	YIL038C	NUF2	P33895	451 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	SPC34	P36131	295 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	RRN10	P38204	145 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	NTC20	P38302	140 aa	Predicted RBP	4.84	□□□□□ -1.64
NOT3	YIL038C	MET30	P39014	640 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	ATF1	P40353	525 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	MEP2	P41948	499 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	HXT14	P42833	540 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	AGX1	P43567	385 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	PMT4	P46971	762 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	BPL1	P48445	690 aa	Predicted RBP	4.84	□□□□□ -1.64
NOT3	YIL038C	ROG1	P53118	685 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	YPR172W	Q06608	200 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	YDL007C-A	Q2V2Q0	85 aa		4.84	□□□□□ -1.64
NOT3	YIL038C	YOL163W	P0CF20	169 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	PPZ1	P26570	692 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	PDX3	P38075	228 aa	Known RBP	4.83	□□□□□ -1.64
NOT3	YIL038C	INM1	P38710	295 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	IPT1	P38954	527 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	MPM1	P40364	252 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	BNA6	P43619	295 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	EMC4	P53073	190 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	YNL181W	P53878	407 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	SMA1	Q02651	245 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	REX4	Q08237	289 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	SRN2	Q99176	213 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	SEC12	P11655	471 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	DPM1	P14020	267 aa	Known RBP	4.83	□□□□□ -1.64
NOT3	YIL038C	PRP28	P23394	588 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	TRX3	P25372	127 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	YJU2	P28320	278 aa	Predicted RBP	4.83	□□□□□ -1.64
NOT3	YIL038C	GSH1	P32477	678 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	SFC1	P33303	322 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	ECM15	P35195	104 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	ARN2	P38724	620 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	ATG7	P38862	630 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	PFS1	P38872	237 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	MUP1	P50276	574 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	FIN1	Q03898	291 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	CTK1	Q03957	528 aa	Known RBP	4.83	□□□□□ -1.64
NOT3	YIL038C	MGR3	Q04472	501 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	SWF1	Q04629	336 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	SNT309	Q06091	175 aa	Predicted RBP	4.83	□□□□□ -1.64
NOT3	YIL038C	TGS1	Q12052	315 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	RGT2	Q12300	763 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	PNS1	Q12412	539 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	STT4	P37297	1900 aa		4.83	□□□□□ -1.64
NOT3	YIL038C	YKR073C	P36153	106 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	STP2	P38704	541 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	BNA3	P47039	444 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	HMS2	P47175	358 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	MRK1	P50873	501 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms