RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W MRX10Q05648 414 aa12.65□□□□□ -0.38
RPN10YHR200W UTP21Q06078 939 aaPredicted RBP12.65□□□□□ -0.38
RPN10YHR200W HDA2Q06629 674 aa12.65□□□□□ -0.38
RPN10YHR200W DAT1P13483 248 aaKnown RBP12.64□□□□□ -0.39
RPN10YHR200W HSP30P25619 332 aa12.64□□□□□ -0.39
RPN10YHR200W RRP4P38792 359 aaKnown RBP12.64□□□□□ -0.39
RPN10YHR200W JLP2P40206 208 aa12.64□□□□□ -0.39
RPN10YHR200W BAP3P41815 604 aa12.64□□□□□ -0.39
RPN10YHR200W YGR054WP53235 642 aaKnown RBP12.64□□□□□ -0.39
RPN10YHR200W YNR062CP53748 327 aa12.64□□□□□ -0.39
RPN10YHR200W NOG1Q02892 647 aaKnown RBP12.64□□□□□ -0.39
RPN10YHR200W RSM10Q03201 203 aa12.64□□□□□ -0.39
RPN10YHR200W MDM30Q05930 598 aa12.64□□□□□ -0.39
RPN10YHR200W MSH5Q12175 901 aa12.64□□□□□ -0.39
RPN10YHR200W YPK2P18961 677 aa12.63□□□□□ -0.39
RPN10YHR200W MTC4P38335 694 aaKnown RBP12.63□□□□□ -0.39
RPN10YHR200W SKN7P38889 622 aa12.63□□□□□ -0.39
RPN10YHR200W FET3P38993 636 aa12.63□□□□□ -0.39
RPN10YHR200W AIM10P39965 576 aaKnown RBP12.63□□□□□ -0.39
RPN10YHR200W OGG1P53397 376 aaPredicted RBP12.63□□□□□ -0.39
RPN10YHR200W PGA1P53896 198 aa12.63□□□□□ -0.39
RPN10YHR200W MAK3Q03503 176 aa12.63□□□□□ -0.39
RPN10YHR200W YMR315WQ04869 349 aaKnown RBP12.63□□□□□ -0.39
RPN10YHR200W YDL114WQ07530 308 aa12.63□□□□□ -0.39
RPN10YHR200W COQ10Q08058 207 aa12.63□□□□□ -0.39
RPN10YHR200W YOR376WQ08900 122 aa12.63□□□□□ -0.39
RPN10YHR200W YOR289WQ12012 251 aaPredicted RBP12.63□□□□□ -0.39
RPN10YHR200W YDL177CQ12257 170 aa12.63□□□□□ -0.39
RPN10YHR200W YOR032W-AQ8TGS1 66 aa12.63□□□□□ -0.39
RPN10YHR200W RAS1P01119 309 aa12.62□□□□□ -0.39
RPN10YHR200W MET2P08465 486 aa12.62□□□□□ -0.39
RPN10YHR200W ERD1P16151 362 aa12.62□□□□□ -0.39
RPN10YHR200W MSN4P33749 630 aa12.62□□□□□ -0.39
RPN10YHR200W RTC2P38279 296 aa12.62□□□□□ -0.39
RPN10YHR200W NVJ1P38881 321 aa12.62□□□□□ -0.39
RPN10YHR200W YER158CP40095 573 aa12.62□□□□□ -0.39
RPN10YHR200W OCA1P50946 238 aaPredicted RBP12.62□□□□□ -0.39
RPN10YHR200W YDR249CQ03787 373 aa12.62□□□□□ -0.39
RPN10YHR200W BUR2Q05949 395 aa12.62□□□□□ -0.39
RPN10YHR200W SEI1Q06058 285 aa12.62□□□□□ -0.39
RPN10YHR200W IES3Q12345 250 aa12.62□□□□□ -0.39
RPN10YHR200W YKR073CP36153 106 aa12.61□□□□□ -0.39
RPN10YHR200W YHR180WP38868 163 aa12.61□□□□□ -0.39
RPN10YHR200W RCF1Q03713 159 aa12.61□□□□□ -0.39
RPN10YHR200W YDR514CQ04408 483 aa12.61□□□□□ -0.39
RPN10YHR200W RLM1Q12224 676 aa12.61□□□□□ -0.39
RPN10YHR200W CUP1-1P0CX80 61 aa12.6□□□□□ -0.39
RPN10YHR200W CUP1-2P0CX81 61 aa12.6□□□□□ -0.39
RPN10YHR200W AIM17P23180 465 aaKnown RBP12.6□□□□□ -0.39
RPN10YHR200W YBR063CP38083 404 aa12.6□□□□□ -0.39
RPN10YHR200W MLH1P38920 769 aa12.6□□□□□ -0.39
RPN10YHR200W HIS6P40545 261 aa12.6□□□□□ -0.39
RPN10YHR200W QRI7P43122 407 aa12.6□□□□□ -0.39
RPN10YHR200W YLR173WQ06247 608 aa12.6□□□□□ -0.39
RPN10YHR200W IPK1Q06667 281 aa12.6□□□□□ -0.39
RPN10YHR200W CYK3Q07533 885 aa12.6□□□□□ -0.39
RPN10YHR200W HSP42Q12329 375 aa12.6□□□□□ -0.39
RPN10YHR200W ADE5,7P07244 802 aaKnown RBP12.59□□□□□ -0.39
RPN10YHR200W PRE2P30656 287 aaKnown RBP12.59□□□□□ -0.39
RPN10YHR200W MTC2P34246 357 aa12.59□□□□□ -0.39
RPN10YHR200W TPO5P36029 618 aa12.59□□□□□ -0.39
RPN10YHR200W VBA2P38358 474 aaKnown RBP12.59□□□□□ -0.39
RPN10YHR200W YER184CP39961 794 aa12.59□□□□□ -0.39
RPN10YHR200W MPP6P53725 186 aaPredicted RBP12.59□□□□□ -0.39
RPN10YHR200W CIK1Q01649 594 aa12.59□□□□□ -0.39
RPN10YHR200W CGI121Q03705 181 aaKnown RBP12.59□□□□□ -0.39
RPN10YHR200W YPS7Q06325 596 aa12.59□□□□□ -0.39
RPN10YHR200W SET6Q12529 373 aa12.59□□□□□ -0.39
RPN10YHR200W RIP1P08067 215 aa12.58□□□□□ -0.4
RPN10YHR200W RPL24BP24000 155 aaKnown RBP12.58□□□□□ -0.4
RPN10YHR200W RAD51P25454 400 aa12.58□□□□□ -0.4
RPN10YHR200W YEF1P32622 495 aa12.58□□□□□ -0.4
RPN10YHR200W SEF1P34228 1148 aa12.58□□□□□ -0.4
RPN10YHR200W SHE1P38200 338 aa12.58□□□□□ -0.4
RPN10YHR200W FMC1P40491 155 aa12.58□□□□□ -0.4
RPN10YHR200W PKP1P40530 394 aa12.58□□□□□ -0.4
RPN10YHR200W PFS2P42841 465 aaKnown RBP12.58□□□□□ -0.4
RPN10YHR200W NUP53Q03790 475 aa12.58□□□□□ -0.4
RPN10YHR200W CDA2Q06703 312 aa12.58□□□□□ -0.4
RPN10YHR200W IRC19Q07843 230 aa12.58□□□□□ -0.4
RPN10YHR200W FRE7Q12333 620 aa12.58□□□□□ -0.4
RPN10YHR200W YGR161W-CQ3E744 92 aa12.58□□□□□ -0.4
RPN10YHR200W CYR1P08678 2026 aaKnown RBP12.57□□□□□ -0.4
RPN10YHR200W PEP4P07267 405 aaKnown RBP12.57□□□□□ -0.4
RPN10YHR200W FPS1P23900 669 aa12.57□□□□□ -0.4
RPN10YHR200W GIT1P25346 518 aa12.57□□□□□ -0.4
RPN10YHR200W LDB16P25587 256 aa12.57□□□□□ -0.4
RPN10YHR200W HSP150P32478 413 aa12.57□□□□□ -0.4
RPN10YHR200W ECT1P33412 323 aa12.57□□□□□ -0.4
RPN10YHR200W CHK1P38147 527 aa12.57□□□□□ -0.4
RPN10YHR200W PHO90P39535 881 aa12.57□□□□□ -0.4
RPN10YHR200W RTT105P40063 208 aa12.57□□□□□ -0.4
RPN10YHR200W SFH5P47008 294 aa12.57□□□□□ -0.4
RPN10YHR200W PFA5Q03289 374 aa12.57□□□□□ -0.4
RPN10YHR200W MRPL1Q04599 285 aa12.57□□□□□ -0.4
RPN10YHR200W SOG2Q08817 791 aa12.57□□□□□ -0.4
RPN10YHR200W BRR2P32639 2163 aaKnown RBP12.56□□□□□ -0.4
RPN10YHR200W EHD3P28817 500 aa12.56□□□□□ -0.4
RPN10YHR200W PCL6P40038 420 aa12.56□□□□□ -0.4
RPN10YHR200W YAE1P47118 141 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 197.9 ms