RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC97	YHR172W	YCR102C	P25608	368 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	CAM1	P29547	415 aa	Known RBP	4.9	□□□□□ -1.63
SPC97	YHR172W	MSN2	P33748	704 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	UPS2	P35200	230 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	CBP4	P37267	147 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	YPT10	P38146	199 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	CUE1	P38428	203 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	BDH1	P39714	382 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	AIR1	P40507	360 aa	Known RBP	4.9	□□□□□ -1.63
SPC97	YHR172W	YJR111C	P47148	283 aa	Known RBP	4.9	□□□□□ -1.63
SPC97	YHR172W	IBD2	P53892	351 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	YPL077C	Q02831	240 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	YMR114C	Q04471	368 aa	Known RBP	4.9	□□□□□ -1.63
SPC97	YHR172W	OPT2	Q06593	877 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	RFU1	Q08003	200 aa		4.9	□□□□□ -1.63
SPC97	YHR172W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.9	□□□□□ -1.63
SPC97	YHR172W	ILV1	P00927	576 aa	Known RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	RPL28	P02406	149 aa	Known RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	PET54	P10834	293 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	MET22	P32179	357 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SPC97	YHR172W	PHO90	P39535	881 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	PCI8	P40512	444 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	UFE1	P41834	346 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	YJR079W	P47126	109 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	TIS11	P47977	285 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	YIP4	P53093	235 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	TRM82	Q03774	444 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	MRPL51	Q06090	140 aa	Predicted RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	RRP42	Q12277	265 aa	Predicted RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	YOR338W	Q99326	363 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	NHP6A	P11632	93 aa	Known RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	TIP20	P33891	701 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	SHE3	P38272	425 aa	Known RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	YJR030C	P47101	745 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	NBP1	P52919	319 aa	Predicted RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	YIF1	P53845	314 aa	Known RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	SNU56	Q03782	492 aa	Known RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	RAD34	Q06665	692 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	YNG1	Q08465	219 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	SET6	Q12529	373 aa		4.89	□□□□□ -1.63
SPC97	YHR172W	RPO41	P13433	1351 aa	Known RBP	4.89	□□□□□ -1.63
SPC97	YHR172W	SNF3	P10870	884 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	CPT1	P17898	393 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	ATO2	P32907	282 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	QRI1	P43123	477 aa	Known RBP	4.88	□□□□□ -1.63
SPC97	YHR172W	YFH7	P43591	353 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	CHA4	P43634	648 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	RIM8	P53179	542 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	CPD1	P53314	239 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	ABF2	Q02486	183 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	PLM2	Q04383	521 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	ARC18	Q05933	178 aa	Known RBP	4.88	□□□□□ -1.63
SPC97	YHR172W	YLR346C	Q06139	101 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	NPC2	Q12408	173 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	RAD52	P06778	471 aa	Known RBP	4.88	□□□□□ -1.63
SPC97	YHR172W	COS2	P0CX12	379 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	COS3	P0CX13	379 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	AIM17	P23180	465 aa	Known RBP	4.88	□□□□□ -1.63
SPC97	YHR172W	MBR1	P23493	339 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	FUN19	P28003	413 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC97	YHR172W	UBC8	P28263	218 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	ECM15	P35195	104 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	IST2	P38250	946 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	SUL1	P38359	859 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	ICP55	P40051	511 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	PYK2	P52489	506 aa	Known RBP	4.88	□□□□□ -1.63
SPC97	YHR172W	NBP35	P52920	328 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	GTR2	P53290	341 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	DUG3	P53871	357 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	HER2	Q03557	464 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	YDR387C	Q04162	555 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	FCY22	Q12119	530 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	POM33	Q12164	279 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	RPN6	Q12377	434 aa		4.88	□□□□□ -1.63
SPC97	YHR172W	CYC1	P00044	109 aa	Predicted RBP	4.87	□□□□□ -1.63
SPC97	YHR172W	KIN3	P22209	435 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	DHH1	P39517	506 aa	Known RBP	4.87	□□□□□ -1.63
SPC97	YHR172W	BDH2	P39713	417 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	CCC1	P47818	322 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	MMS2	P53152	137 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	JAC1	P53193	184 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	MHR1	Q06630	226 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	BBP1	Q12365	385 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	AMD1	P15274	810 aa	Known RBP	4.87	□□□□□ -1.63
SPC97	YHR172W	DCC1	P25559	380 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	APE2	P32454	952 aa	Known RBP	4.87	□□□□□ -1.63
SPC97	YHR172W	ZRT1	P32804	376 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	YKL187C	P34231	750 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	ECM13	P38195	257 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	YBP1	P38315	674 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	YGR201C	P42936	225 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	ASG7	P46993	209 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	TOS2	P50078	622 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	GTF1	P53260	183 aa	Predicted RBP	4.87	□□□□□ -1.63
SPC97	YHR172W	NRK1	P53915	240 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	GPI15	P53961	229 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	AAT1	Q01802	451 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	KIN4	Q01919	800 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	YVH1	Q02256	364 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 104.2 ms