RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W GTO1P48239 356 aa3.07□□□□□ -1.92
PTI1YGR156W TRF5P48561 642 aaKnown RBP3.07□□□□□ -1.92
PTI1YGR156W VOA1P53262 265 aa3.07□□□□□ -1.92
PTI1YGR156W CSM3Q04659 317 aa3.07□□□□□ -1.92
PTI1YGR156W PRM6Q04705 352 aa3.07□□□□□ -1.92
PTI1YGR156W YDL114WQ07530 308 aa3.07□□□□□ -1.92
PTI1YGR156W LOT6Q07923 191 aa3.07□□□□□ -1.92
PTI1YGR156W FDH1Q08911 376 aa3.07□□□□□ -1.92
PTI1YGR156W YGK3Q12222 375 aaPredicted RBP3.07□□□□□ -1.92
PTI1YGR156W AUS1Q08409 1394 aa3.07□□□□□ -1.92
PTI1YGR156W YIL177CP40434 1758 aa3.07□□□□□ -1.92
PTI1YGR156W YJL225CP40889 1758 aa3.07□□□□□ -1.92
PTI1YGR156W CAR2P07991 424 aaKnown RBP3.06□□□□□ -1.92
PTI1YGR156W RPS8AP0CX39 200 aaKnown RBP3.06□□□□□ -1.92
PTI1YGR156W RPS8BP0CX40 200 aaKnown RBP3.06□□□□□ -1.92
PTI1YGR156W RPB5P20434 215 aa3.06□□□□□ -1.92
PTI1YGR156W RFS1P38234 210 aaKnown RBP3.06□□□□□ -1.92
PTI1YGR156W FET3P38993 636 aa3.06□□□□□ -1.92
PTI1YGR156W RBG1P39729 369 aa3.06□□□□□ -1.92
PTI1YGR156W PTI1P39927 425 aaPredicted RBP3.06□□□□□ -1.92
PTI1YGR156W CIN2P46670 268 aa3.06□□□□□ -1.92
PTI1YGR156W NCA3P46955 337 aa3.06□□□□□ -1.92
PTI1YGR156W TAF6P53040 516 aa3.06□□□□□ -1.92
PTI1YGR156W YGL185CP53100 379 aa3.06□□□□□ -1.92
PTI1YGR156W MKC7P53379 596 aa3.06□□□□□ -1.92
PTI1YGR156W KAP95Q06142 861 aaKnown RBP3.06□□□□□ -1.92
PTI1YGR156W SMC5Q08204 1093 aa3.06□□□□□ -1.92
PTI1YGR156W YRM1Q12340 786 aa3.06□□□□□ -1.92
PTI1YGR156W MRPL23Q12487 163 aaPredicted RBP3.06□□□□□ -1.92
PTI1YGR156W PIS1P06197 220 aaKnown RBP3.05□□□□□ -1.92
PTI1YGR156W MSI1P13712 422 aa3.05□□□□□ -1.92
PTI1YGR156W ACB1P31787 87 aa3.05□□□□□ -1.92
PTI1YGR156W HXT1P32465 570 aa3.05□□□□□ -1.92
PTI1YGR156W PAD1P33751 242 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
PTI1YGR156W SPO23P33757 523 aa3.05□□□□□ -1.92
PTI1YGR156W ANR2P36090 516 aaPredicted RBP3.05□□□□□ -1.92
PTI1YGR156W YKR015CP36111 568 aa3.05□□□□□ -1.92
PTI1YGR156W YIL029CP40538 142 aa3.05□□□□□ -1.92
PTI1YGR156W YFL067WP43537 175 aa3.05□□□□□ -1.92
PTI1YGR156W AIM24P47127 394 aa3.05□□□□□ -1.92
PTI1YGR156W YJR085CP47131 105 aaKnown RBP3.05□□□□□ -1.92
PTI1YGR156W MST27P53176 234 aa3.05□□□□□ -1.92
PTI1YGR156W TRM112P53738 135 aaPredicted RBP3.05□□□□□ -1.92
PTI1YGR156W CWC25P53854 179 aaKnown RBP3.05□□□□□ -1.92
PTI1YGR156W NUP116Q02630 1113 aa3.05□□□□□ -1.92
PTI1YGR156W RVB1Q03940 463 aaKnown RBP3.05□□□□□ -1.92
PTI1YGR156W BCP1Q06338 283 aa3.05□□□□□ -1.92
PTI1YGR156W MRPL35Q06678 367 aa3.05□□□□□ -1.92
PTI1YGR156W TSR1Q07381 788 aaKnown RBP3.05□□□□□ -1.92
PTI1YGR156W EAF3Q12432 401 aa3.05□□□□□ -1.92
PTI1YGR156W SAL1D6W196 494 aa3.04□□□□□ -1.92
PTI1YGR156W SSA3P09435 649 aaKnown RBP3.04□□□□□ -1.92
PTI1YGR156W SPT15P13393 240 aaKnown RBP3.04□□□□□ -1.92
PTI1YGR156W VMA5P31412 392 aaKnown RBP3.04□□□□□ -1.92
PTI1YGR156W RAD23P32628 398 aaKnown RBP3.04□□□□□ -1.92
PTI1YGR156W RPT5P33297 434 aaKnown RBP3.04□□□□□ -1.92
PTI1YGR156W RPC25P35718 212 aa3.04□□□□□ -1.92
PTI1YGR156W MYO3P36006 1272 aa3.04□□□□□ -1.92
PTI1YGR156W IML3P38265 245 aa3.04□□□□□ -1.92
PTI1YGR156W PEX18P38855 283 aa3.04□□□□□ -1.92
PTI1YGR156W YHR182WP38870 785 aa3.04□□□□□ -1.92
PTI1YGR156W PET100P38958 111 aa3.04□□□□□ -1.92
PTI1YGR156W WWM1P43582 211 aaKnown RBP3.04□□□□□ -1.92
PTI1YGR156W LCB3P47013 409 aa3.04□□□□□ -1.92
PTI1YGR156W MND1P53102 219 aa3.04□□□□□ -1.92
PTI1YGR156W LSG1P53145 640 aaKnown RBP3.04□□□□□ -1.92
PTI1YGR156W OKP1P53298 406 aa3.04□□□□□ -1.92
PTI1YGR156W PXR1P53335 271 aaPredicted RBP3.04□□□□□ -1.92
PTI1YGR156W BIO4P53630 237 aa3.04□□□□□ -1.92
PTI1YGR156W MTQ1P53944 314 aa3.04□□□□□ -1.92
PTI1YGR156W ELP3Q02908 557 aaKnown RBP3.04□□□□□ -1.92
PTI1YGR156W PBA1Q05778 276 aa3.04□□□□□ -1.92
PTI1YGR156W YPR091CQ06833 770 aa3.04□□□□□ -1.92
PTI1YGR156W BSC6Q08280 497 aa3.04□□□□□ -1.92
PTI1YGR156W DNL4Q08387 944 aaPredicted RBP3.04□□□□□ -1.92
PTI1YGR156W FCY22Q12119 530 aa3.04□□□□□ -1.92
PTI1YGR156W MCT1Q12283 360 aa3.04□□□□□ -1.92
PTI1YGR156W YDL199CQ12407 687 aa3.04□□□□□ -1.92
PTI1YGR156W RPL5P26321 297 aaKnown RBP3.03□□□□□ -1.92
PTI1YGR156W POP5P28005 173 aa3.03□□□□□ -1.92
PTI1YGR156W ARO2P28777 376 aaKnown RBP3.03□□□□□ -1.92
PTI1YGR156W RCK2P38623 610 aa3.03□□□□□ -1.92
PTI1YGR156W YPT35P38815 214 aaKnown RBP3.03□□□□□ -1.92
PTI1YGR156W BNS1P50084 137 aa3.03□□□□□ -1.92
PTI1YGR156W YGR168CP53293 376 aa3.03□□□□□ -1.92
PTI1YGR156W YNL260CP53846 198 aa3.03□□□□□ -1.92
PTI1YGR156W TRM44Q02648 567 aaKnown RBP3.03□□□□□ -1.92
PTI1YGR156W YMR027WQ04371 470 aa3.03□□□□□ -1.92
PTI1YGR156W CMS1Q07897 291 aaKnown RBP3.03□□□□□ -1.92
PTI1YGR156W TMS1Q12116 473 aa3.03□□□□□ -1.92
PTI1YGR156W TY3A-GQ12173 290 aa3.03□□□□□ -1.92
PTI1YGR156W RPN6Q12377 434 aa3.03□□□□□ -1.92
PTI1YGR156W APC2Q12440 853 aa3.03□□□□□ -1.92
PTI1YGR156W PCL9Q12477 304 aa3.03□□□□□ -1.92
PTI1YGR156W TY3A-IQ99219 290 aa3.03□□□□□ -1.92
PTI1YGR156W UBA3Q99344 299 aa3.03□□□□□ -1.92
PTI1YGR156W UTP10P42945 1769 aaKnown RBP3.02□□□□□ -1.93
PTI1YGR156W SAC3P46674 1301 aa3.02□□□□□ -1.93
PTI1YGR156W HHF1P02309 103 aaKnown RBP3.02□□□□□ -1.93
PTI1YGR156W RPS18AP0CX55 146 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms