RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC9	YGR009C	YPS1	P32329	569 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	UGP1	P32861	499 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	IXR1	P33417	597 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	MRPL24	P36525	258 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	VBA2	P38358	474 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	MMS21	P38632	267 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	FSH1	P38777	243 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	SKN7	P38889	622 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	CHL4	P38907	458 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	PLB1	P39105	664 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YER158C	P40095	573 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	MAD2	P40958	196 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YCH1	P42937	148 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SEC9	YGR009C	YJL045W	P47052	634 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	STE24	P47154	453 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YPR003C	P53394	754 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	HCH1	P53834	153 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	UBC7	Q02159	165 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	STD1	Q02794	444 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	AIM34	Q03673	198 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	CTK1	Q03957	528 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	SIZ1	Q04195	904 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YMR130W	Q04223	302 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	MRX9	Q07349	420 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	SHS1	Q07657	551 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	GPB1	Q08886	897 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	PRP46	Q12417	451 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	YBR298C-A	Q8TGK4	73 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	COB	P00163	385 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	ADH2	P00331	348 aa	Known RBP	4.55	□□□□□ -1.68
SEC9	YGR009C	CDC26	P14724	124 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	CTS1	P29029	562 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	EMP70	P32802	667 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	YHR112C	P38716	378 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	YHR127W	P38833	243 aa	Known RBP	4.55	□□□□□ -1.68
SEC9	YGR009C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SEC9	YGR009C	IST3	P40565	148 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC9	YGR009C	GLC8	P41818	229 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	SPG5	P42933	373 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	RPS12	P48589	143 aa	Known RBP	4.55	□□□□□ -1.68
SEC9	YGR009C	AIF1	P52923	378 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	NIF3	P53081	288 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	FLC3	P53121	802 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	ERV14	P53173	138 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	APS2	Q00381	147 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	SHR3	Q02774	210 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	ODC1	Q03028	310 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	IPK1	Q06667	281 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	FEX2	Q08991	375 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	YPR063C	Q12160	140 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	RRI1	Q12468	440 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	MEX67	Q99257	599 aa	Known RBP	4.55	□□□□□ -1.68
SEC9	YGR009C	NUP170	P38181	1502 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	LYS2	P07702	1392 aa		4.55	□□□□□ -1.68
SEC9	YGR009C	ADE4	P04046	510 aa	Known RBP	4.54	□□□□□ -1.68
SEC9	YGR009C	PHO2	P07269	559 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	IMA3	P0CW40	589 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	IMA4	P0CW41	589 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SEC9	YGR009C	MRPL44	P19956	98 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	DAL82	P21705	255 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	SPO11	P23179	398 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	YCR023C	P25351	611 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	ILV6	P25605	309 aa	Known RBP	4.54	□□□□□ -1.68
SEC9	YGR009C	RCK1	P38622	512 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	RRG9	P40156	214 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	RPL10	P41805	221 aa	Known RBP	4.54	□□□□□ -1.68
SEC9	YGR009C	GNA1	P43577	159 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC9	YGR009C	CIN2	P46670	268 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	IKS1	P47042	667 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	ZAP1	P47043	880 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	YGR149W	P48236	432 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	PMT5	P52867	743 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	YGR026W	P53217	278 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	GIP3	Q03016	1276 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	NAT4	Q04751	285 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	TVP18	Q04767	167 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	AAD4	Q07747	329 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	IMA2	Q08295	589 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	RDI1	Q12434	202 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	YHR213W-A	Q8TGT4	77 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	SAS5	Q99314	248 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	ROM2	P51862	1356 aa	Known RBP	4.54	□□□□□ -1.68
SEC9	YGR009C	SCC2	Q04002	1493 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	PEX4	P29340	183 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	ARP2	P32381	391 aa	Known RBP	4.54	□□□□□ -1.68
SEC9	YGR009C	YKL162C	P36052	402 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	SOL2	P37262	315 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	PMT4	P46971	762 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	SPT20	P50875	604 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	CSL4	P53859	292 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC9	YGR009C	INN1	P53901	409 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	SDH1	Q00711	640 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	YMR160W	Q03823	816 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	OSW1	Q08692	278 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	SAM4	Q08985	325 aa	Known RBP	4.54	□□□□□ -1.68
SEC9	YGR009C	ATX2	Q12067	313 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	YOR012W	Q12351	137 aa		4.54	□□□□□ -1.68
SEC9	YGR009C	PRM4	Q12498	284 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms