RNA–Protein interactions for RNA: YDR457W

TOM1, Transcript of E3 ubiquitin ligase of the hect-domain class, yeastyeast

Gene TOM1, Length 9,807 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOM1YDR457W RNH202Q05635 350 aa2.62□□□□□ -1.99
TOM1YDR457W ECM22Q05958 814 aaPredicted RBP2.62□□□□□ -1.99
TOM1YDR457W TAZ1Q06510 381 aa2.62□□□□□ -1.99
TOM1YDR457W MMP1Q12372 583 aa2.62□□□□□ -1.99
TOM1YDR457W TMA7Q3E764 64 aaKnown RBP2.62□□□□□ -1.99
TOM1YDR457W NFS1P25374 497 aa2.62□□□□□ -1.99
TOM1YDR457W MRP49P32388 137 aa2.62□□□□□ -1.99
TOM1YDR457W ARN1P38731 627 aa2.62□□□□□ -1.99
TOM1YDR457W ORM1P53224 222 aa2.62□□□□□ -1.99
TOM1YDR457W ARV1Q06541 321 aa2.62□□□□□ -1.99
TOM1YDR457W YLR108CQ12259 485 aa2.62□□□□□ -1.99
TOM1YDR457W LSB5P25369 354 aa2.62□□□□□ -1.99
TOM1YDR457W UPS2P35200 230 aa2.62□□□□□ -1.99
TOM1YDR457W CSH1P38287 376 aa2.62□□□□□ -1.99
TOM1YDR457W YGL114WP53134 725 aa2.62□□□□□ -1.99
TOM1YDR457W CAF40P53829 373 aa2.62□□□□□ -1.99
TOM1YDR457W VBA1Q04301 562 aa2.62□□□□□ -1.99
TOM1YDR457W YDL121CQ07541 149 aa2.62□□□□□ -1.99
TOM1YDR457W THI73Q07904 523 aa2.62□□□□□ -1.99
TOM1YDR457W SLO1Q3E784 85 aa2.62□□□□□ -1.99
TOM1YDR457W GRX2P17695 143 aaKnown RBP2.62□□□□□ -1.99
TOM1YDR457W MSS51P32335 436 aa2.62□□□□□ -1.99
TOM1YDR457W DOA1P36037 715 aa2.62□□□□□ -1.99
TOM1YDR457W ART5P53244 586 aaKnown RBP2.62□□□□□ -1.99
TOM1YDR457W GLO2Q05584 274 aa2.62□□□□□ -1.99
TOM1YDR457W YPR172WQ06608 200 aa2.62□□□□□ -1.99
TOM1YDR457W IRC10Q08118 586 aa2.62□□□□□ -1.99
TOM1YDR457W TSC3Q3E790 80 aa2.62□□□□□ -1.99
TOM1YDR457W QCR7P00128 127 aa2.61□□□□□ -1.99
TOM1YDR457W BUD23P25627 275 aaPredicted RBP2.61□□□□□ -1.99
TOM1YDR457W ATG12P38316 186 aa2.61□□□□□ -1.99
TOM1YDR457W PRS3P38689 320 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W CEM1P39525 442 aa2.61□□□□□ -1.99
TOM1YDR457W MNT3P40549 630 aa2.61□□□□□ -1.99
TOM1YDR457W IBA57P47158 497 aa2.61□□□□□ -1.99
TOM1YDR457W BRR6P53062 197 aa2.61□□□□□ -1.99
TOM1YDR457W RRP40Q08285 240 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W SWT1Q12104 458 aa2.61□□□□□ -1.99
TOM1YDR457W PHO5P00635 467 aa2.61□□□□□ -1.99
TOM1YDR457W LDS1P31379 325 aa2.61□□□□□ -1.99
TOM1YDR457W RMA1P36001 430 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W ROT2P38138 954 aa2.61□□□□□ -1.99
TOM1YDR457W DOG1P38774 246 aa2.61□□□□□ -1.99
TOM1YDR457W SMK1P41808 388 aa2.61□□□□□ -1.99
TOM1YDR457W SNN1P48232 102 aa2.61□□□□□ -1.99
TOM1YDR457W PHO23P50947 330 aa2.61□□□□□ -1.99
TOM1YDR457W MST27P53176 234 aa2.61□□□□□ -1.99
TOM1YDR457W YPR003CP53394 754 aa2.61□□□□□ -1.99
TOM1YDR457W DUS1P53759 423 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W AIM11P87275 137 aa2.61□□□□□ -1.99
TOM1YDR457W ERO1Q03103 563 aa2.61□□□□□ -1.99
TOM1YDR457W DXO1Q06349 442 aa2.61□□□□□ -1.99
TOM1YDR457W YEL009C-AA0A023PZF2 135 aa2.61□□□□□ -1.99
TOM1YDR457W GAL7P08431 366 aa2.61□□□□□ -1.99
TOM1YDR457W MDH1P17505 334 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
TOM1YDR457W SIT4P20604 311 aa2.61□□□□□ -1.99
TOM1YDR457W RPL16AP26784 199 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W TMT1P32643 299 aa2.61□□□□□ -1.99
TOM1YDR457W STB5P38699 743 aa2.61□□□□□ -1.99
TOM1YDR457W TRR2P38816 342 aa2.61□□□□□ -1.99
TOM1YDR457W HSP10P38910 106 aa2.61□□□□□ -1.99
TOM1YDR457W POP2P39008 433 aa2.61□□□□□ -1.99
TOM1YDR457W YFL052WP43551 465 aa2.61□□□□□ -1.99
TOM1YDR457W AIM22P47051 409 aa2.61□□□□□ -1.99
TOM1YDR457W AVT1P47082 602 aa2.61□□□□□ -1.99
TOM1YDR457W YVH1Q02256 364 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W TPP1Q03796 238 aa2.61□□□□□ -1.99
TOM1YDR457W RAV2Q03956 351 aa2.61□□□□□ -1.99
TOM1YDR457W NAT4Q04751 285 aa2.61□□□□□ -1.99
TOM1YDR457W ROY1Q04847 553 aa2.61□□□□□ -1.99
TOM1YDR457W YDR262WQ12331 272 aa2.61□□□□□ -1.99
TOM1YDR457W JLP1Q12358 412 aa2.61□□□□□ -1.99
TOM1YDR457W RPS31P05759 152 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W PUT1P09368 476 aa2.61□□□□□ -1.99
TOM1YDR457W UBI4P0CG63 381 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W PUT4P15380 627 aa2.61□□□□□ -1.99
TOM1YDR457W IXR1P33417 597 aa2.61□□□□□ -1.99
TOM1YDR457W APS1P35181 156 aa2.61□□□□□ -1.99
TOM1YDR457W ARL3Q02804 198 aa2.61□□□□□ -1.99
TOM1YDR457W VBA4Q04602 768 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W MSC3Q05812 728 aa2.61□□□□□ -1.99
TOM1YDR457W YLR446WQ06204 433 aa2.61□□□□□ -1.99
TOM1YDR457W PLB3Q08108 686 aa2.61□□□□□ -1.99
TOM1YDR457W PDR11P40550 1411 aa2.61□□□□□ -1.99
TOM1YDR457W GCY1P14065 312 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
TOM1YDR457W NUP1P20676 1076 aa2.61□□□□□ -1.99
TOM1YDR457W MKK1P32490 508 aa2.61□□□□□ -1.99
TOM1YDR457W TRM7P38238 310 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W HXT5P38695 592 aa2.61□□□□□ -1.99
TOM1YDR457W TDA2P40045 126 aa2.61□□□□□ -1.99
TOM1YDR457W RPE1P46969 238 aa2.61□□□□□ -1.99
TOM1YDR457W NMA2P53204 395 aa2.61□□□□□ -1.99
TOM1YDR457W EKI1Q03764 534 aa2.61□□□□□ -1.99
TOM1YDR457W IZH2Q12442 317 aa2.61□□□□□ -1.99
TOM1YDR457W BAR1P12630 587 aa2.61□□□□□ -1.99
TOM1YDR457W ADE2P21264 571 aaKnown RBP2.61□□□□□ -1.99
TOM1YDR457W IMG2P25642 146 aaPredicted RBP2.61□□□□□ -1.99
TOM1YDR457W FRE4P53746 719 aa2.61□□□□□ -1.99
TOM1YDR457W ECM9Q02202 377 aa2.61□□□□□ -1.99
TOM1YDR457W YPR196WQ06595 470 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms