RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W RPN14P53196 417 aa2.84□□□□□ -1.95
SHR3YDL212W YNL143CP53908 130 aa2.84□□□□□ -1.95
SHR3YDL212W YDR286CQ05530 114 aa2.84□□□□□ -1.95
SHR3YDL212W APC5Q08683 685 aa2.84□□□□□ -1.95
SHR3YDL212W SAG1P20840 650 aa2.83□□□□□ -1.96
SHR3YDL212W SRB2P34162 210 aa2.83□□□□□ -1.96
SHR3YDL212W CAJ1P39101 391 aa2.83□□□□□ -1.96
SHR3YDL212W RRG9P40156 214 aa2.83□□□□□ -1.96
SHR3YDL212W YNL320WP42840 284 aa2.83□□□□□ -1.96
SHR3YDL212W TPC1P53257 314 aa2.83□□□□□ -1.96
SHR3YDL212W PRM1P53835 661 aa2.83□□□□□ -1.96
SHR3YDL212W YMR244WQ04018 355 aa2.83□□□□□ -1.96
SHR3YDL212W YMR310CQ04867 317 aaPredicted RBP2.83□□□□□ -1.96
SHR3YDL212W PML1Q07930 204 aaPredicted RBP2.83□□□□□ -1.96
SHR3YDL212W RPN8Q08723 338 aaKnown RBP2.83□□□□□ -1.96
SHR3YDL212W CKA2P19454 339 aa2.82□□□□□ -1.96
SHR3YDL212W YMR262WP38430 313 aa2.82□□□□□ -1.96
SHR3YDL212W RPA34P47006 233 aaPredicted RBP2.82□□□□□ -1.96
SHR3YDL212W NRM1P53718 249 aa2.82□□□□□ -1.96
SHR3YDL212W FAR10Q06001 478 aa2.82□□□□□ -1.96
SHR3YDL212W PGC1Q08959 321 aa2.82□□□□□ -1.96
SHR3YDL212W PSY3Q12318 242 aa2.82□□□□□ -1.96
SHR3YDL212W APC2Q12440 853 aa2.82□□□□□ -1.96
SHR3YDL212W STE3P06783 470 aa2.81□□□□□ -1.96
SHR3YDL212W RPB9P27999 122 aa2.81□□□□□ -1.96
SHR3YDL212W HMX1P32339 317 aa2.81□□□□□ -1.96
SHR3YDL212W YEL043WP32618 956 aa2.81□□□□□ -1.96
SHR3YDL212W YKL071WP36086 256 aa2.81□□□□□ -1.96
SHR3YDL212W IML3P38265 245 aa2.81□□□□□ -1.96
SHR3YDL212W YIL059CP40520 121 aa2.81□□□□□ -1.96
SHR3YDL212W NAS2P40555 220 aa2.81□□□□□ -1.96
SHR3YDL212W CUE3P53137 624 aaKnown RBP2.81□□□□□ -1.96
SHR3YDL212W PDR16P53860 351 aaKnown RBP2.81□□□□□ -1.96
SHR3YDL212W AQR1P53943 586 aa2.81□□□□□ -1.96
SHR3YDL212W SMD1Q02260 146 aaPredicted RBP2.81□□□□□ -1.96
SHR3YDL212W APC4Q04601 652 aa2.81□□□□□ -1.96
SHR3YDL212W ECM19Q06011 112 aa2.81□□□□□ -1.96
SHR3YDL212W GLE1Q12315 538 aa2.81□□□□□ -1.96
SHR3YDL212W ERG9P29704 444 aa2.8□□□□□ -1.96
SHR3YDL212W UIP5P36137 443 aa2.8□□□□□ -1.96
SHR3YDL212W PEX32P38292 413 aa2.8□□□□□ -1.96
SHR3YDL212W EFM1P38732 585 aa2.8□□□□□ -1.96
SHR3YDL212W DIA1P54005 336 aa2.8□□□□□ -1.96
SHR3YDL212W INP1Q03694 420 aa2.8□□□□□ -1.96
SHR3YDL212W UTP15Q04305 513 aaKnown RBP2.8□□□□□ -1.96
SHR3YDL212W DFM1Q12743 341 aaKnown RBP2.8□□□□□ -1.96
SHR3YDL212W NBL1Q3E7Y6 73 aa2.8□□□□□ -1.96
SHR3YDL212W VPS63O13549 108 aa2.79□□□□□ -1.96
SHR3YDL212W SMI1P32566 505 aa2.79□□□□□ -1.96
SHR3YDL212W PCH2P38126 564 aa2.79□□□□□ -1.96
SHR3YDL212W HRT1Q08273 121 aa2.79□□□□□ -1.96
SHR3YDL212W TAL1P15019 335 aaKnown RBP2.78□□□□□ -1.96
SHR3YDL212W CPT1P17898 393 aa2.78□□□□□ -1.96
SHR3YDL212W HXT2P23585 541 aa2.78□□□□□ -1.96
SHR3YDL212W CIN8P27895 1000 aa2.78□□□□□ -1.96
SHR3YDL212W ZRT3P34240 503 aa2.78□□□□□ -1.96
SHR3YDL212W FYV8P46949 817 aaKnown RBP2.78□□□□□ -1.96
SHR3YDL212W RPS23AP0CX29 145 aaKnown RBP2.77□□□□□ -1.97
SHR3YDL212W RPS23BP0CX30 145 aa2.77□□□□□ -1.97
SHR3YDL212W MMS21P38632 267 aa2.77□□□□□ -1.97
SHR3YDL212W SMF2P38778 549 aa2.77□□□□□ -1.97
SHR3YDL212W YMR134WP40207 237 aa2.77□□□□□ -1.97
SHR3YDL212W SPH1Q06160 661 aa2.77□□□□□ -1.97
SHR3YDL212W ARR1Q06596 294 aa2.77□□□□□ -1.97
SHR3YDL212W DIB1Q06819 143 aaPredicted RBP2.77□□□□□ -1.97
SHR3YDL212W MIM1Q08176 113 aa2.77□□□□□ -1.97
SHR3YDL212W CUP2P15315 225 aa2.76□□□□□ -1.97
SHR3YDL212W YIL089WP40500 205 aa2.76□□□□□ -1.97
SHR3YDL212W SHE4P51534 789 aa2.76□□□□□ -1.97
SHR3YDL212W RRB1Q04225 511 aaKnown RBP2.76□□□□□ -1.97
SHR3YDL212W GMC1Q04399 608 aa2.76□□□□□ -1.97
SHR3YDL212W SPO24Q3E752 67 aa2.76□□□□□ -1.97
SHR3YDL212W MYO3P36006 1272 aa2.75□□□□□ -1.97
SHR3YDL212W RFT1P38206 574 aaPredicted RBP2.75□□□□□ -1.97
SHR3YDL212W ALP1P38971 573 aa2.75□□□□□ -1.97
SHR3YDL212W FMP48P53233 369 aa2.75□□□□□ -1.97
SHR3YDL212W VTI1Q04338 217 aa2.75□□□□□ -1.97
SHR3YDL212W MHP1P43638 1398 aa2.74□□□□□ -1.97
SHR3YDL212W REP1P03871 373 aa2.74□□□□□ -1.97
SHR3YDL212W SPS100P13130 326 aa2.74□□□□□ -1.97
SHR3YDL212W CTA1P15202 515 aa2.74□□□□□ -1.97
SHR3YDL212W KRR1P25586 316 aaPredicted RBP2.74□□□□□ -1.97
SHR3YDL212W RCK1P38622 512 aa2.74□□□□□ -1.97
SHR3YDL212W HIT1P46973 164 aa2.74□□□□□ -1.97
SHR3YDL212W YJL144WP47009 104 aa2.74□□□□□ -1.97
SHR3YDL212W YLL053CP0CD98 152 aa2.73□□□□□ -1.97
SHR3YDL212W VMA2P16140 517 aaKnown RBP2.73□□□□□ -1.97
SHR3YDL212W DCC1P25559 380 aa2.73□□□□□ -1.97
SHR3YDL212W LIN1P38852 340 aaPredicted RBP2.73□□□□□ -1.97
SHR3YDL212W DSE1P40077 573 aa2.73□□□□□ -1.97
SHR3YDL212W GTO3Q04806 366 aa2.73□□□□□ -1.97
SHR3YDL212W YDR222WQ04925 415 aa2.73□□□□□ -1.97
SHR3YDL212W PRP46Q12417 451 aaPredicted RBP2.73□□□□□ -1.97
SHR3YDL212W TRX1P22217 103 aaKnown RBP2.72□□□□□ -1.97
SHR3YDL212W PRP39P39682 629 aaKnown RBP2.72□□□□□ -1.97
SHR3YDL212W BTT1P40314 149 aaPredicted RBP2.72□□□□□ -1.97
SHR3YDL212W PMT4P46971 762 aa2.72□□□□□ -1.97
SHR3YDL212W SDS23P53172 527 aa2.72□□□□□ -1.97
SHR3YDL212W SDH4P37298 181 aa2.71□□□□□ -1.98
SHR3YDL212W YGL114WP53134 725 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 158.6 ms