RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	PHO84	P25297	587 aa	Known RBP	2.68	□□□□□ -1.98
RTG3	YBL103C	RRF1	P38771	230 aa		2.68	□□□□□ -1.98
RTG3	YBL103C	RBG1	P39729	369 aa		2.68	□□□□□ -1.98
RTG3	YBL103C	YNL320W	P42840	284 aa		2.68	□□□□□ -1.98
RTG3	YBL103C	INP1	Q03694	420 aa		2.68	□□□□□ -1.98
RTG3	YBL103C	SMP3	Q04174	516 aa		2.68	□□□□□ -1.98
RTG3	YBL103C	RPC40	P07703	335 aa	Known RBP	2.67	□□□□□ -1.98
RTG3	YBL103C	UIP5	P36137	443 aa		2.67	□□□□□ -1.98
RTG3	YBL103C	DAD2	P36162	133 aa		2.67	□□□□□ -1.98
RTG3	YBL103C	EFM1	P38732	585 aa		2.67	□□□□□ -1.98
RTG3	YBL103C	PCL7	P40186	285 aa		2.67	□□□□□ -1.98
RTG3	YBL103C	GMC1	Q04399	608 aa		2.67	□□□□□ -1.98
RTG3	YBL103C	PML1	Q07930	204 aa	Predicted RBP	2.67	□□□□□ -1.98
RTG3	YBL103C	TAF10	Q12030	206 aa		2.67	□□□□□ -1.98
RTG3	YBL103C	AIM45	Q12480	344 aa	Known RBP	2.67	□□□□□ -1.98
RTG3	YBL103C	LSG1	P53145	640 aa	Known RBP	2.66	□□□□□ -1.98
RTG3	YBL103C	YNR068C	P53754	272 aa		2.66	□□□□□ -1.98
RTG3	YBL103C	SPH1	Q06160	661 aa		2.66	□□□□□ -1.98
RTG3	YBL103C	PSY3	Q12318	242 aa		2.66	□□□□□ -1.98
RTG3	YBL103C	RPL6B	P05739	176 aa	Known RBP	2.65	□□□□□ -1.98
RTG3	YBL103C	CKI1	P20485	582 aa		2.65	□□□□□ -1.98
RTG3	YBL103C	GRR1	P24814	1151 aa		2.65	□□□□□ -1.98
RTG3	YBL103C	ADH5	P38113	351 aa	Known RBP	2.65	□□□□□ -1.98
RTG3	YBL103C	PCH2	P38126	564 aa		2.65	□□□□□ -1.98
RTG3	YBL103C	YSW1	P38280	609 aa		2.65	□□□□□ -1.98
RTG3	YBL103C	OSW5	P40219	148 aa		2.65	□□□□□ -1.98
RTG3	YBL103C	NAS2	P40555	220 aa		2.65	□□□□□ -1.98
RTG3	YBL103C	RPL6A	Q02326	176 aa	Known RBP	2.65	□□□□□ -1.98
RTG3	YBL103C	CSM3	Q04659	317 aa		2.65	□□□□□ -1.98
RTG3	YBL103C	ECM19	Q06011	112 aa		2.65	□□□□□ -1.98
RTG3	YBL103C	VPS63	O13549	108 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	RPB9	P27999	122 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	MKK1	P32490	508 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	IST2	P38250	946 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	YIL089W	P40500	205 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	HIT1	P46973	164 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	ASG7	P46993	209 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	CUE3	P53137	624 aa	Known RBP	2.65	□□□□□ -1.99
RTG3	YBL103C	MPS2	P53159	387 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	DBP9	Q06218	594 aa	Known RBP	2.65	□□□□□ -1.99
RTG3	YBL103C	MDY2	Q12285	212 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	RPN6	Q12377	434 aa		2.65	□□□□□ -1.99
RTG3	YBL103C	DAP2	P18962	818 aa		2.64	□□□□□ -1.99
RTG3	YBL103C	YEL043W	P32618	956 aa		2.64	□□□□□ -1.99
RTG3	YBL103C	PPQ1	P32945	549 aa		2.64	□□□□□ -1.99
RTG3	YBL103C	ZRT3	P34240	503 aa		2.64	□□□□□ -1.99
RTG3	YBL103C	RTT105	P40063	208 aa		2.64	□□□□□ -1.99
RTG3	YBL103C	RRG9	P40156	214 aa		2.64	□□□□□ -1.99
RTG3	YBL103C	DFM1	Q12743	341 aa	Known RBP	2.64	□□□□□ -1.99
RTG3	YBL103C	MRPS5	P33759	307 aa		2.63	□□□□□ -1.99
RTG3	YBL103C	SDH4	P37298	181 aa		2.63	□□□□□ -1.99
RTG3	YBL103C	YCH1	P42937	148 aa		2.63	□□□□□ -1.99
RTG3	YBL103C	SHE4	P51534	789 aa		2.63	□□□□□ -1.99
RTG3	YBL103C	PDR16	P53860	351 aa	Known RBP	2.63	□□□□□ -1.99
RTG3	YBL103C	YMR111C	Q04461	462 aa	Predicted RBP	2.63	□□□□□ -1.99
RTG3	YBL103C	NAT4	Q04751	285 aa		2.63	□□□□□ -1.99
RTG3	YBL103C	RPN8	Q08723	338 aa	Known RBP	2.63	□□□□□ -1.99
RTG3	YBL103C	YOR012W	Q12351	137 aa		2.63	□□□□□ -1.99
RTG3	YBL103C	PRP46	Q12417	451 aa	Predicted RBP	2.63	□□□□□ -1.99
RTG3	YBL103C	TFB5	Q3E7C1	72 aa	Predicted RBP	2.63	□□□□□ -1.99
RTG3	YBL103C	INO80	P53115	1489 aa		2.62	□□□□□ -1.99
RTG3	YBL103C	ARF2	P19146	181 aa	Known RBP	2.62	□□□□□ -1.99
RTG3	YBL103C	SUR1	P33300	382 aa		2.62	□□□□□ -1.99
RTG3	YBL103C	GDT1	P38301	280 aa	Predicted RBP	2.62	□□□□□ -1.99
RTG3	YBL103C	AQR1	P53943	586 aa		2.62	□□□□□ -1.99
RTG3	YBL103C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
RTG3	YBL103C	RTC5	Q12108	567 aa	Known RBP	2.62	□□□□□ -1.99
RTG3	YBL103C	MXR2	P25566	168 aa		2.61	□□□□□ -1.99
RTG3	YBL103C	FAA1	P30624	700 aa	Known RBP	2.61	□□□□□ -1.99
RTG3	YBL103C	UTR5	P32630	166 aa		2.61	□□□□□ -1.99
RTG3	YBL103C	RIB7	P33312	244 aa		2.61	□□□□□ -1.99
RTG3	YBL103C	TKL2	P33315	681 aa		2.61	□□□□□ -1.99
RTG3	YBL103C	FMP48	P53233	369 aa		2.61	□□□□□ -1.99
RTG3	YBL103C	RRB1	Q04225	511 aa	Known RBP	2.61	□□□□□ -1.99
RTG3	YBL103C	APC5	Q08683	685 aa		2.61	□□□□□ -1.99
RTG3	YBL103C	TAL1	P15019	335 aa	Known RBP	2.6	□□□□□ -1.99
RTG3	YBL103C	UTR1	P21373	530 aa		2.6	□□□□□ -1.99
RTG3	YBL103C	DAL80	P26343	269 aa		2.6	□□□□□ -1.99
RTG3	YBL103C	ECM14	P38836	430 aa		2.6	□□□□□ -1.99
RTG3	YBL103C	PRO2	P54885	456 aa	Known RBP	2.6	□□□□□ -1.99
RTG3	YBL103C	GTO3	Q04806	366 aa		2.6	□□□□□ -1.99
RTG3	YBL103C	GLE1	Q12315	538 aa		2.6	□□□□□ -1.99
RTG3	YBL103C	MAS1	P10507	462 aa		2.59	□□□□□ -1.99
RTG3	YBL103C	HPR1	P17629	752 aa	Known RBP	2.59	□□□□□ -1.99
RTG3	YBL103C	ALK2	P32789	676 aa	Predicted RBP	2.59	□□□□□ -1.99
RTG3	YBL103C	TPC1	P53257	314 aa		2.59	□□□□□ -1.99
RTG3	YBL103C	YNL143C	P53908	130 aa		2.59	□□□□□ -1.99
RTG3	YBL103C	ERV25	P54837	211 aa	Known RBP	2.59	□□□□□ -1.99
RTG3	YBL103C	ABZ2	Q03266	374 aa		2.59	□□□□□ -1.99
RTG3	YBL103C	MGR3	Q04472	501 aa		2.59	□□□□□ -1.99
RTG3	YBL103C	DIB1	Q06819	143 aa	Predicted RBP	2.59	□□□□□ -1.99
RTG3	YBL103C	RRP36	Q12481	300 aa	Predicted RBP	2.59	□□□□□ -1.99
RTG3	YBL103C	SFG1	Q12507	346 aa		2.59	□□□□□ -1.99
RTG3	YBL103C	STE3	P06783	470 aa		2.58	□□□□□ -2
RTG3	YBL103C	CTA1	P15202	515 aa		2.58	□□□□□ -2
RTG3	YBL103C	UBA1	P22515	1024 aa	Known RBP	2.58	□□□□□ -2
RTG3	YBL103C	RFT1	P38206	574 aa	Predicted RBP	2.58	□□□□□ -2
RTG3	YBL103C	YDR089W	P38966	869 aa		2.58	□□□□□ -2
RTG3	YBL103C	YHC3	P47040	408 aa		2.58	□□□□□ -2
RTG3	YBL103C	CAX4	P53223	239 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms