RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	GNA1	P43577	159 aa	Predicted RBP	3.55	□□□□□ -1.84
SWH1	YAR042W	YJR030C	P47101	745 aa		3.55	□□□□□ -1.84
SWH1	YAR042W	MUP1	P50276	574 aa		3.55	□□□□□ -1.84
SWH1	YAR042W	PHO23	P50947	330 aa		3.55	□□□□□ -1.84
SWH1	YAR042W	SAY1	P53324	424 aa		3.55	□□□□□ -1.84
SWH1	YAR042W	SNO1	Q03144	224 aa		3.55	□□□□□ -1.84
SWH1	YAR042W	LRS4	Q04087	347 aa	Known RBP	3.55	□□□□□ -1.84
SWH1	YAR042W	RRN11	Q04712	507 aa		3.55	□□□□□ -1.84
SWH1	YAR042W	ANT1	Q06497	328 aa		3.55	□□□□□ -1.84
SWH1	YAR042W	FMP40	Q08968	688 aa	Predicted RBP	3.55	□□□□□ -1.84
SWH1	YAR042W	YPR011C	Q12251	326 aa		3.55	□□□□□ -1.84
SWH1	YAR042W	SFM1	Q12314	213 aa		3.55	□□□□□ -1.84
SWH1	YAR042W	CDC9	P04819	755 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	SST2	P11972	698 aa	Known RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	APA1	P16550	321 aa	Known RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	RPA135	P22138	1203 aa	Known RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	ADE1	P27616	306 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	LDS1	P31379	325 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	SFC1	P33303	322 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	PRP18	P33411	251 aa	Predicted RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	LOT5	P34234	306 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	MTH1	P35198	433 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	KAE1	P36132	386 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	IKI1	P38874	309 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	RTS2	P40962	232 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	DUG1	P43616	481 aa	Known RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	YJL043W	P47053	257 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	LOH1	P47055	219 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	IBA57	P47158	497 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	OCA1	P50946	238 aa	Predicted RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	FRE4	P53746	719 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	YSA1	Q01976	231 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	SRP1	Q02821	542 aa	Known RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	YDL176W	Q12027	708 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	DCN1	Q12395	269 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	YJR112W-A	Q3E743	109 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	TDH1	P00360	332 aa	Known RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	IFM1	P25038	676 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	YIM1	P28625	365 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	SUA5	P32579	426 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	SHM2	P37291	469 aa	Known RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	AXL2	P38928	823 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	BMT5	P40493	336 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	YJR141W	P47172	347 aa	Predicted RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	PHB2	P50085	310 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	LYS5	P50113	272 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	SDT1	P53078	280 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	MNT4	P53745	580 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	YMR252C	Q04814	134 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	IPK1	Q06667	281 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	YPR091C	Q06833	770 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	PCL9	Q12477	304 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	HAA1	Q12753	694 aa	Known RBP	3.54	□□□□□ -1.84
SWH1	YAR042W	VMA9	Q3E7B6	73 aa		3.54	□□□□□ -1.84
SWH1	YAR042W	COX3	P00420	269 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	SNF6	P18888	332 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	YSR3	P23501	404 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	MRP17	P28778	131 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	ITR1	P30605	584 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	CDC13	P32797	924 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	SUR1	P33300	382 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	RPS20	P38701	121 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
SWH1	YAR042W	PZF1	P39933	429 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	ALK1	P43633	760 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	MRX5	P47007	382 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	YHC3	P47040	408 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	DOC1	P53068	250 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	OKP1	P53298	406 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	RNH202	Q05635	350 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	CYK3	Q07533	885 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	RRP42	Q12277	265 aa	Predicted RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	PSF1	Q12488	208 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	YDL007C-A	Q2V2Q0	85 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	HTS1	P07263	546 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	ZWF1	P11412	505 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	PDA1	P16387	420 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	HOP1	P20050	605 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	PRE7	P23724	241 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	EXG1	P23776	448 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	SPS19	P32573	292 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	EMP24	P32803	203 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	PMT1	P33775	817 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	CHL4	P38907	458 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	SLM1	P40485	686 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	MET28	P40573	187 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	MNN10	P50108	393 aa	Known RBP	3.53	□□□□□ -1.84
SWH1	YAR042W	VEL1	P53058	206 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	MNT2	P53059	558 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	MTL1	P53214	551 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	HST3	P53687	447 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	MRPL22	P53881	309 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	ARG5,6	Q01217	863 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	OAZ1	Q02803	292 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	SPR28	Q04921	423 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	CIA1	Q05583	330 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	YPR114W	Q06107	315 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	GUP2	Q08929	609 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	CMC2	Q3E7A4	109 aa		3.53	□□□□□ -1.84
SWH1	YAR042W	HBN1	Q96VH4	193 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 168.3 ms