RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C MKC7P53379 596 aa1.88□□□□□ -2.11
SPC72YAL047C YNL146WP53906 100 aa1.88□□□□□ -2.11
SPC72YAL047C CCE1Q03702 353 aa1.88□□□□□ -2.11
SPC72YAL047C RAX1Q08760 435 aa1.88□□□□□ -2.11
SPC72YAL047C MRPL23Q12487 163 aaPredicted RBP1.88□□□□□ -2.11
SPC72YAL047C CAP2P13517 287 aa1.88□□□□□ -2.11
SPC72YAL047C TOA2P32774 122 aa1.88□□□□□ -2.11
SPC72YAL047C SKT5P34226 696 aa1.88□□□□□ -2.11
SPC72YAL047C SWC5P38326 303 aa1.88□□□□□ -2.11
SPC72YAL047C YHR122WP38829 231 aa1.88□□□□□ -2.11
SPC72YAL047C END3P39013 349 aa1.88□□□□□ -2.11
SPC72YAL047C OXA1P39952 402 aa1.88□□□□□ -2.11
SPC72YAL047C LYS12P40495 371 aaKnown RBP1.88□□□□□ -2.11
SPC72YAL047C MAM33P40513 266 aa1.88□□□□□ -2.11
SPC72YAL047C HAC1P41546 238 aa1.88□□□□□ -2.11
SPC72YAL047C AIP1P46680 615 aaKnown RBP1.88□□□□□ -2.11
SPC72YAL047C RRN9P53437 365 aa1.88□□□□□ -2.11
SPC72YAL047C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
SPC72YAL047C SPR6Q01684 191 aa1.88□□□□□ -2.11
SPC72YAL047C CAB5Q03941 241 aa1.88□□□□□ -2.11
SPC72YAL047C RTN1Q04947 295 aaKnown RBP1.88□□□□□ -2.11
SPC72YAL047C ALE1Q08548 619 aa1.88□□□□□ -2.11
SPC72YAL047C FLO11P08640 1367 aa1.87□□□□□ -2.11
SPC72YAL047C YLL053CP0CD98 152 aa1.87□□□□□ -2.11
SPC72YAL047C SSC1P0CS90 654 aaKnown RBP1.87□□□□□ -2.11
SPC72YAL047C OM45P16547 393 aa1.87□□□□□ -2.11
SPC72YAL047C CKI1P20485 582 aa1.87□□□□□ -2.11
SPC72YAL047C EXG1P23776 448 aaKnown RBP1.87□□□□□ -2.11
SPC72YAL047C PET18P25362 215 aa1.87□□□□□ -2.11
SPC72YAL047C ZUO1P32527 433 aaKnown RBP1.87□□□□□ -2.11
SPC72YAL047C YEF1P32622 495 aa1.87□□□□□ -2.11
SPC72YAL047C LCP5P40079 357 aaPredicted RBP1.87□□□□□ -2.11
SPC72YAL047C GCD14P46959 383 aaPredicted RBP1.87□□□□□ -2.11
SPC72YAL047C ABM1P47146 123 aa1.87□□□□□ -2.11
SPC72YAL047C RIB4P50861 169 aaPredicted RBP1.87□□□□□ -2.11
SPC72YAL047C PNC1P53184 216 aaKnown RBP1.87□□□□□ -2.11
SPC72YAL047C DBP6P53734 629 aaKnown RBP1.87□□□□□ -2.11
SPC72YAL047C ECM11Q04110 302 aa1.87□□□□□ -2.11
SPC72YAL047C YLR413WQ06689 675 aa1.87□□□□□ -2.11
SPC72YAL047C YPQ1Q12010 308 aa1.87□□□□□ -2.11
SPC72YAL047C YGK3Q12222 375 aaPredicted RBP1.87□□□□□ -2.11
SPC72YAL047C YOP1Q12402 180 aa1.87□□□□□ -2.11
SPC72YAL047C FAB1P34756 2278 aa1.87□□□□□ -2.11
SPC72YAL047C AUS1Q08409 1394 aa1.87□□□□□ -2.11
SPC72YAL047C RPB5P20434 215 aa1.86□□□□□ -2.11
SPC72YAL047C CIN8P27895 1000 aa1.86□□□□□ -2.11
SPC72YAL047C YPS1P32329 569 aa1.86□□□□□ -2.11
SPC72YAL047C BUD2P33314 1104 aa1.86□□□□□ -2.11
SPC72YAL047C MRPS9P38120 278 aa1.86□□□□□ -2.11
SPC72YAL047C GPX2P38143 162 aa1.86□□□□□ -2.11
SPC72YAL047C SEC9P40357 651 aa1.86□□□□□ -2.11
SPC72YAL047C LCB3P47013 409 aa1.86□□□□□ -2.11
SPC72YAL047C MDM36Q06820 579 aa1.86□□□□□ -2.11
SPC72YAL047C CMS1Q07897 291 aaKnown RBP1.86□□□□□ -2.11
SPC72YAL047C SMC5Q08204 1093 aa1.86□□□□□ -2.11
SPC72YAL047C EAF3Q12432 401 aa1.86□□□□□ -2.11
SPC72YAL047C CEX1Q12453 761 aa1.86□□□□□ -2.11
SPC72YAL047C YOR338WQ99326 363 aa1.86□□□□□ -2.11
SPC72YAL047C GCN1P33892 2672 aaKnown RBP1.86□□□□□ -2.11
SPC72YAL047C PAB1P04147 577 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
SPC72YAL047C MXR2P25566 168 aa1.86□□□□□ -2.11
SPC72YAL047C MCR1P36060 302 aaKnown RBP1.86□□□□□ -2.11
SPC72YAL047C GEP4P38812 185 aa1.86□□□□□ -2.11
SPC72YAL047C ATG7P38862 630 aa1.86□□□□□ -2.11
SPC72YAL047C AIM24P47127 394 aa1.86□□□□□ -2.11
SPC72YAL047C YGL185CP53100 379 aa1.86□□□□□ -2.11
SPC72YAL047C COS1P53822 381 aa1.86□□□□□ -2.11
SPC72YAL047C EGD1Q02642 157 aaKnown RBP1.86□□□□□ -2.11
SPC72YAL047C YMR111CQ04461 462 aaPredicted RBP1.86□□□□□ -2.11
SPC72YAL047C ECM18Q04623 453 aa1.86□□□□□ -2.11
SPC72YAL047C LOT6Q07923 191 aa1.86□□□□□ -2.11
SPC72YAL047C GAT3Q07928 141 aa1.86□□□□□ -2.11
SPC72YAL047C APC5Q08683 685 aa1.86□□□□□ -2.11
SPC72YAL047C YDR262WQ12331 272 aa1.86□□□□□ -2.11
SPC72YAL047C YBL111CQ3E7Y5 667 aa1.86□□□□□ -2.11
SPC72YAL047C PHA2P32452 334 aa1.85□□□□□ -2.11
SPC72YAL047C EFB1P32471 206 aaKnown RBP1.85□□□□□ -2.11
SPC72YAL047C VAM7P32912 316 aa1.85□□□□□ -2.11
SPC72YAL047C MRPS5P33759 307 aa1.85□□□□□ -2.11
SPC72YAL047C MYO3P36006 1272 aa1.85□□□□□ -2.11
SPC72YAL047C VPS45P38932 577 aa1.85□□□□□ -2.11
SPC72YAL047C RTR1P40084 226 aaPredicted RBP1.85□□□□□ -2.11
SPC72YAL047C YER186CP40101 306 aa1.85□□□□□ -2.11
SPC72YAL047C EGT2P42835 1041 aa1.85□□□□□ -2.11
SPC72YAL047C LOC1P43586 204 aaPredicted RBP1.85□□□□□ -2.11
SPC72YAL047C MST27P53176 234 aa1.85□□□□□ -2.11
SPC72YAL047C RPN14P53196 417 aa1.85□□□□□ -2.11
SPC72YAL047C CRH1P53301 507 aa1.85□□□□□ -2.11
SPC72YAL047C YET2Q04210 160 aa1.85□□□□□ -2.11
SPC72YAL047C NAT4Q04751 285 aa1.85□□□□□ -2.11
SPC72YAL047C BUR2Q05949 395 aa1.85□□□□□ -2.11
SPC72YAL047C VAC14Q06708 880 aa1.85□□□□□ -2.11
SPC72YAL047C SHS1Q07657 551 aa1.85□□□□□ -2.11
SPC72YAL047C RGS2Q99188 309 aa1.85□□□□□ -2.11
SPC72YAL047C DET1Q99288 334 aaKnown RBP1.85□□□□□ -2.11
SPC72YAL047C COX4P04037 155 aa1.84□□□□□ -2.11
SPC72YAL047C PIS1P06197 220 aaKnown RBP1.84□□□□□ -2.11
SPC72YAL047C CAR2P07991 424 aaKnown RBP1.84□□□□□ -2.11
SPC72YAL047C RPL18AP0CX49 186 aaKnown RBP1.84□□□□□ -2.11
SPC72YAL047C RPL18BP0CX50 186 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 73 ms